For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_5170 (-)

annotation: pyridoxamine 5'-phosphate oxidase family protein
coordinates: 5271288 - 5271731
length: 147

GRQVFDDKLLALICNNSLGVLATIKQDGRPQLSNVSYHFDPRAQTFQVSITEPRAKTRNLRRDPRASIHV
SSDDGWAYAVAEGDAILTPPAASTHDDTVEGLIALYRNISGEHPDWDEFRQAMVDDRRVLMTLPITHVYG
MPPGMR*

Operon Prediction Model: Genebank

Paralogs

species id gene e-value identity (len) annotation
M. smegmatis MC2 155 MSMEG_5170 - - 100% (147) pyridoxamine 5'-phosphate oxidase family protein
M. smegmatis MC2 155 MSMEG_6576 - 5e-36 53.85% (130) pyridoxamine 5'-phosphate oxidase family protein
M. smegmatis MC2 155 MSMEG_6485 - 2e-16 43.75% (128) ATP binding protein

Closest Orthologs (e-value cutoff: 1e-4)

species id gene e-value identity (len) annotation
M. bovis AF2122 / 97 Mb1186 - 1e-66 80.27% (147) hypothetical protein Mb1186
M. gilvum PYR-GCK Mflv_2137 - 1e-68 80.95% (147) pyridoxamine 5'-phosphate oxidase-related, FMN-binding
M. tuberculosis H37Rv Rv1155 - 1e-65 79.59% (147) hypothetical protein Rv1155
M. leprae Br4923 MLBr_01508 - 4e-63 77.55% (147) hypothetical protein MLBr_01508
M. abscessus ATCC 19977 MAB_2595 - 7e-34 52.24% (134) putative pyridoxamine 5'-phosphate oxidase
M. marinum M MMAR_4298 - 6e-65 78.91% (147) hypothetical protein MMAR_4298
M. avium 104 MAV_1292 - 1e-69 83.67% (147) pyridoxamine 5'-phosphate oxidase family protein
M. thermoresistible (build 8) TH_0458 - 3e-68 80.27% (147) CONSERVED HYPOTHETICAL PROTEIN
M. ulcerans Agy99 MUL_0996 - 3e-63 78.23% (147) hypothetical protein MUL_0996
M. vanbaalenii PYR-1 Mvan_4567 - 1e-66 80.95% (147) pyridoxamine 5'-phosphate oxidase-related, FMN-binding

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_2137|M.gilvum_PYR-GCK          ----------------MTRDVFDDKLLALLAGNSLGVLATLKRDGRPQLS
Mvan_4567|M.vanbaalenii_PYR-1       ----------------MTRDVFDDKLLALIGGNSLGVLATLKRDGRPQLS
MSMEG_5170|M.smegmatis_MC2_155      ----------------MGRQVFDDKLLALICNNSLGVLATIKQDGRPQLS
MMAR_4298|M.marinum_M               ----------------MGRQVFDDKLLAVISGNSIGVLATIKHDGRPQLS
MUL_0996|M.ulcerans_Agy99           ----------------MGRQVFDDKLLAVISGNSIGVLATIKHDGRPQLS
MLBr_01508|M.leprae_Br4923          MRFGASLLRVRRRLYGMGSQVFDDKLLAVISGNSIGVLATIKRDGRPQLS
Mb1186|M.bovis_AF2122/97            ----------------MARQVFDDKLLAVISGNSIGVLATIKHDGRPQLS
Rv1155|M.tuberculosis_H37Rv         ----------------MARQVFDDKLLAVISGNSIGVLATIKHDGRPQLS
MAV_1292|M.avium_104                ----------------MGRQVFDDKLLAVISGNSLGVLATIKRDGRPQLS
TH_0458|M.thermoresistible__bu      ----------------MTRRVFDDKLLAVIAGNSLGVLATIKRDGRPQLS
MAB_2595|M.abscessus_ATCC_1997      ----------------MASDRFDP--HALITESRLGILATIKSSGLPQLS
                                                    *    **    *::  . :*:***:* .* ****

Mflv_2137|M.gilvum_PYR-GCK          NVSYFFDPRALTISVSITEPRAKTRNLRRDPRAAIHVSSDDGWAYAVAEG
Mvan_4567|M.vanbaalenii_PYR-1       NVSYHFDARTLTISVSIAEPRAKTRNLRRDPRAAIHVSSDDGWAYAVAEG
MSMEG_5170|M.smegmatis_MC2_155      NVSYHFDPRAQTFQVSITEPRAKTRNLRRDPRASIHVSSDDGWAYAVAEG
MMAR_4298|M.marinum_M               NVQYYFDARKLVVQVSITEPRAKTRNLRRDPRASILVDADDGWSYAVAEG
MUL_0996|M.ulcerans_Agy99           NVQYYFDARKLVVQVSITEPRAKTRNLRRDPRASILVDADDGRSYAVAEG
MLBr_01508|M.leprae_Br4923          NVQYHFDPRDLAVRVSITEPGVKTRNLRRDPRASILVDVDDGWSYAVAEG
Mb1186|M.bovis_AF2122/97            NVQYHFDPRKLLIQVSIAEPRAKTRNLRRDPRASILVDADDGWSYAVAEG
Rv1155|M.tuberculosis_H37Rv         NVQYHFDPRKLLIQVSIAEPRAKTRNLRRDPRASILVDADDGWSYAVAEG
MAV_1292|M.avium_104                NVQYHFDPRSLVIQVSITEPRAKTRNLRRDPRASILVDADDGWSYAVAEG
TH_0458|M.thermoresistible__bu      NVTYYFDPRRLTIQVSVTEPRAKTRNLRRDPRASIHVSSDDGWSYAVAEG
MAB_2595|M.abscessus_ATCC_1997      PVTPYYDRDNGIIYVSMTDGRAKTANLRRDPRAALECTSSDGRAWATAEG
                                     *  .:*     . **:::  .** ********::    .** ::*.***

Mflv_2137|M.gilvum_PYR-GCK          DAVLSPPAANPDDDTVAGLVELYRSLAGEHPDWDDYRRAMVDDRRVLMTL
Mvan_4567|M.vanbaalenii_PYR-1       DAVLSAPAADPGDDTVTGLIELYRNISGEHPDWDDYRRAMVDERRVLMRL
MSMEG_5170|M.smegmatis_MC2_155      DAILTPPAASTHDDTVEGLIALYRNISGEHPDWDEFRQAMVDDRRVLMTL
MMAR_4298|M.marinum_M               TAELTPPAAAPDDETVEALIALYRNIAGEHPDWDEYREAMVTDRRVLLTL
MUL_0996|M.ulcerans_Agy99           TAELTPPAAAPDDETVEALIALYRNIAGEHPDWDEYREAMVIDRRVLLTL
MLBr_01508|M.leprae_Br4923          TAELTPPAAAPDDDTVEALIVLYRNIVGEHLDWDEYRQAMVTDRRVLLTL
Mb1186|M.bovis_AF2122/97            TAQLTPPAAAPDDDTVEALIALYRNIAGEHPDWDDYRQAMVTDRRVLLTL
Rv1155|M.tuberculosis_H37Rv         TAQLTPPAAAPDDDTVEALIALYRNIAGEHSDWDDYRQAMVTDRRVLLTL
MAV_1292|M.avium_104                TAELTPPAAAPDDDTVQGLIALYRNIAGEHPDWDEYRQAMVTDRRVLLTL
TH_0458|M.thermoresistible__bu      TVTLTPEAADPYDDTVEGLIELYRNIAGEHPDWDDYRRAMVEDRRVLLTM
MAB_2595|M.abscessus_ATCC_1997      HVTLTGPGADPDGPEVQALVDYYRGAAGEHPDWDEYRSVMVSDRRVLMAL
                                     . *:  .* . .  * .*:  **.  *** ***::* .** :****: :

Mflv_2137|M.gilvum_PYR-GCK          PISHVYGMPPGKR
Mvan_4567|M.vanbaalenii_PYR-1       PISHVYGMPPGKR
MSMEG_5170|M.smegmatis_MC2_155      PITHVYGMPPGMR
MMAR_4298|M.marinum_M               PISHVYGLPPGKR
MUL_0996|M.ulcerans_Agy99           PISHVYGLPPGKR
MLBr_01508|M.leprae_Br4923          PILHVYGLPPGIR
Mb1186|M.bovis_AF2122/97            PISHVYGLPPGMR
Rv1155|M.tuberculosis_H37Rv         PISHVYGLPPGMR
MAV_1292|M.avium_104                PISHVYGMPPGMR
TH_0458|M.thermoresistible__bu      PISHVYGMPPGMR
MAB_2595|M.abscessus_ATCC_1997      RVERVYGQKLG--
                                     : :***   *

species	id	gene	e-value	identity (len)	annotation
M. smegmatis MC2 155	MSMEG_5170	-	-	100% (147)	pyridoxamine 5'-phosphate oxidase family protein
M. smegmatis MC2 155	MSMEG_6576	-	5e-36	53.85% (130)	pyridoxamine 5'-phosphate oxidase family protein
M. smegmatis MC2 155	MSMEG_6485	-	2e-16	43.75% (128)	ATP binding protein