For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VLRPWSFSVTHADHFVNSIKPGRHAPIHESMDRKSVLDLMSPEGTFVRAAMKSLDRLGVGAGSGEDAIAD AGYPGFLHAFNAVRDPEEWGGNRGPINDQVGTRYWEVVELRREGDFFRTGVCSYGSAIAVKTQDGYRSSG SKPIGSATWITFGPDPALAKDKQAVPPSNQRGPERAPVLDVFGSWVITDLNVLDAAKDLPQCMSTLAPGT PSDAPKDYVVQTEPPPTLPPSPGWPDA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_5097 | - | - | 100% (237) | hypothetical protein MSMEG_5097 |
M. smegmatis MC2 155 | MSMEG_5099 | - | 2e-07 | 26.80% (153) | hypothetical protein MSMEG_5099 |
M. smegmatis MC2 155 | MSMEG_5090 | - | 1e-06 | 26.11% (180) | hypothetical protein MSMEG_5090 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1104c | - | 7e-50 | 48.05% (231) | hypothetical protein MAB_1104c |
M. marinum M | MMAR_3060 | - | 3e-07 | 25.00% (192) | hypothetical protein MMAR_3060 |
M. avium 104 | MAV_4813 | - | 2e-08 | 27.03% (185) | hypothetical protein MAV_4813 |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_2304 | - | 4e-07 | 27.55% (196) | hypothetical protein MUL_2304 |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_3060|M.marinum_M -MRIRSELRSLAAFLAVAVLLVGGCGSGGRSGEGPASTSAAPPAGWPAAL MUL_2304|M.ulcerans_Agy99 MMRIRPELRTIAAFLAVAVLLVGGCGSGGRSGEGPASTSAVAPAGWPAAL MAV_4813|M.avium_104 -------------------------------------------------- MSMEG_5097|M.smegmatis_MC2_155 MLRPWSFSVTHADHFVNSIK-------------------PGRHAPIHESM MAB_1104c|M.abscessus_ATCC_199 -MSPRTLTLTAAAMCALLVTSC-------------THEKPKQPALTWENK MMAR_3060|M.marinum_M GDFTMVWTAEPGVDVTAWPAVVVRAYTESFVLASIMNDD------KYLYP MUL_2304|M.ulcerans_Agy99 DDFTMVWTAEPGIDVTAWPAVVVRAYTESFLLASITRDD------KYLYP MAV_4813|M.avium_104 --------------------MPVRAYTESYLLASIMGDN------RYLYP MSMEG_5097|M.smegmatis_MC2_155 DR-------KSVLDLMSPEGTFVRAAMKSLDRLGVGAGSGEDAIADAGYP MAB_1104c|M.abscessus_ATCC_199 DRTTMRWIPNPVADLMFPEGTFVRAITESFTAAQSGPGRGIDAIRAVGYP *** :* . ** MMAR_3060|M.marinum_M GFRQSVDPNKSIDDPIGTQYLWPRKYYPQRP-WVGTQREHILSVTASGRD MUL_2304|M.ulcerans_Agy99 GFAQSVDPNKSIHDPISTQFLWPKTDEPREPRWVGTQRDHILSVTTSGRD MAV_4813|M.avium_104 GFQQSVDPNQSINHPIGTQSLWPKTNAPQQQ-WIGTVQVHILSVTTAGRD MSMEG_5097|M.smegmatis_MC2_155 GFLHAFNAVRDPEEWGGNRG-------P-INDQVGTRYWEVVELRREGDF MAB_1104c|M.abscessus_ATCC_199 GFDHAFNNGWDLDFFGESQGFD--YLYPNLVENVGTDYAEIVELRQDGDQ ** ::.: . . .: * :** .::.: * MMAR_3060|M.marinum_M ITAIVCEYTFGAASEGRF-GRRYAPHAVGPDPYKGIESLRITMTAP-AKP MUL_2304|M.ulcerans_Agy99 VTVIVCEYTFGVASESYLRGGWWRAHVVGPEPYSGIDKMRITMTAP-VKP MAV_4813|M.avium_104 VTVVACEYTFGSAQPARH---GYEPNIGKPPPYSGIDPLRITMETP-AKP MSMEG_5097|M.smegmatis_MC2_155 FRTGVCSY--GSAIAVKTQDG-YRSSGSKPIGSATWITFGPDPALAKDKQ MAB_1104c|M.abscessus_ATCC_199 FTAGVCGY--GSLTAGKMTDGTYHSGGSQSLGHAQWLIFGPDPKLPAGQQ . . .* * * : . . : . : MMAR_3060|M.marinum_M VLPLPAQQGPARAPSVDVFAGWRITSHQGGWFARSGVGSDWPHVIEDQDT MUL_2304|M.ulcerans_Agy99 VAPLPAQQGPARAPSIDVFAGWRITSRQGGWFVAAGVGSDWPGAAEDRDT MAV_4813|M.avium_104 -GPQSPQRGPARSPSVDVFNGWRITSHQGGYFAQSGVGDEWPNAIEDRNT MSMEG_5097|M.smegmatis_MC2_155 AVPPSNQRGPERAPVLDVFGSWVITD-----LNVLDAAKDLPQCMSTLAP MAB_1104c|M.abscessus_ATCC_199 HPPLANQRGPAKRPTDNVFGTWVLTC-----IDF--AATDLPQCK-KLAP * . *:** : * :** * :* : .. : * . MMAR_3060|M.marinum_M CLAKAPPHPDFVSGEEYDRSLFPTLPASPGWPSMSANA MUL_2304|M.ulcerans_Agy99 CLAKAPPHPDLVPGEEYDRSLFPTLPASPGWPSTSANA MAV_4813|M.avium_104 CLAKASQHPDLQRGGEYPRTDFPTLPPSPGWPAPSAAS MSMEG_5097|M.smegmatis_MC2_155 GTPSDAPKDYVVQT-----EPPPTLPPSPGWPDA---- MAB_1104c|M.abscessus_ATCC_199 GIPNNWPKPYVRP------DPPLTLPNDPGWPEGSSA- .. : . *** .****