For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSEPTSRQRLDTPRVWRGPRLQVDVEAVGRVSESIARFLGTGRYLAIQTIFVVVWIALNLFAVGYEWDPY PFILLNLAFSTQAAYAAPLILLAQNRQENRDRVSLEEDRRRAEQTKADTEFLARELASLRLAIGEVATRD YLRRELEEIRDMISELQQPPPTTDRAGSGKGDGGERRSKRGG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_5066 | - | - | 100% (182) | integral membrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1263c | - | 2e-60 | 64.84% (182) | hypothetical protein Mb1263c |
M. gilvum PYR-GCK | Mflv_2207 | - | 2e-70 | 74.44% (180) | hypothetical protein Mflv_2207 |
M. tuberculosis H37Rv | Rv1231c | - | 2e-60 | 64.84% (182) | hypothetical protein Rv1231c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1523c | - | 7e-70 | 81.65% (158) | hypothetical protein MAB_1523c |
M. marinum M | MMAR_4210 | - | 8e-63 | 67.22% (180) | hypothetical protein MMAR_4210 |
M. avium 104 | MAV_1370 | - | 5e-60 | 63.33% (180) | integral membrane protein |
M. thermoresistible (build 8) | TH_2064 | - | 8e-68 | 77.19% (171) | PROBABLE MEMBRANE PROTEIN |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_4489 | - | 1e-73 | 76.22% (185) | hypothetical protein Mvan_4489 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_2207|M.gilvum_PYR-GCK MSEPSSRQRLDTPRVSRSFAP--RLDIEAVGRFSEGIARFLGTGRYLAIQ Mvan_4489|M.vanbaalenii_PYR-1 MSDASSRQRLDTPRVSRGLAP--RLDIEAVGRFSERIARFLGTGRYLAIQ MSMEG_5066|M.smegmatis_MC2_155 MSEPTSRQRLDTPRVWRGPRL--QVDVEAVGRVSESIARFLGTGRYLAIQ TH_2064|M.thermoresistible__bu VSELSARQRLDTPRASRGLDLGLGLDVDAMGRFSERIARFLGTGRYLAAQ MAB_1523c|M.abscessus_ATCC_199 MSDASARQRLDTPRTSRRLSL--GLDVEAVGRVSENIARFLGTGRYLAIQ Mb1263c|M.bovis_AF2122/97 MSKPFAPRRLYTPRTSRTLAP--RLDPEAVGRTTESIARFFGTGRYLLVQ Rv1231c|M.tuberculosis_H37Rv MSKPFAPRRLYTPRTSRTLAP--RLDPEAVGRTTESIARFFGTGRYLLVQ MMAR_4210|M.marinum_M MSKTPAARRLYTPRTSRAFAP--RLDPEAVGRTTESIARFFGTGRYLLVQ MAV_1370|M.avium_104 MSKSTAVRRLYTPRTSRRYSP--RLDPETVGQITESIARFFGTGRYLLLQ :*. : :** ***. * :* :::*: :* ****:****** * Mflv_2207|M.gilvum_PYR-GCK TIVVIVWILLNLGAFAWQWDPYPFILLNLAFSTQAAYAAPLILLAQNRQE Mvan_4489|M.vanbaalenii_PYR-1 TILVIVWVLLNLGAFAWQWDPYPFILLNLAFSTQAAYAAPLILLAQNRQE MSMEG_5066|M.smegmatis_MC2_155 TIFVVVWIALNLFAVGYEWDPYPFILLNLAFSTQAAYAAPLILLAQNRQE TH_2064|M.thermoresistible__bu TIVVVVWIALNIGAFAWQWDPYPFILLNLAFSTQAAYAAPLILLAQNRQE MAB_1523c|M.abscessus_ATCC_199 TIFVVVWIALNLFAVGLEWDPYPFILLNLAFSTQAAYAAPLILLAQNRQE Mb1263c|M.bovis_AF2122/97 TLLVLTWIVLNLFAVGLRWDPYPFILLNLAFSTQASYAAPLILLAQNRQE Rv1231c|M.tuberculosis_H37Rv TLLVLTWIVLNLFAVGLRWDPYPFILLNLAFSTQASYAAPLILLAQNRQE MMAR_4210|M.marinum_M TLIVVIWISLNLFAVKLRWDPYPFILLNLAFSTQASYAAPLILLAQNRQE MAV_1370|M.avium_104 TIVVAVWIVVNVFAVRLRWDPYPFILLNLAFSTQAAYAAPLILLAQNRQE *:.* *: :*: *. .*****************:************** Mflv_2207|M.gilvum_PYR-GCK NRDRVALDEDRRRAQQTKADTEFLARELAALRLAVGEVATRDYLRRELDE Mvan_4489|M.vanbaalenii_PYR-1 NRDRVALEEDRRRAEQTKADTEFLARELAALRLAVGEVATRDYLRRELEE MSMEG_5066|M.smegmatis_MC2_155 NRDRVSLEEDRRRAEQTKADTEFLARELASLRLAIGEVATRDYLRRELEE TH_2064|M.thermoresistible__bu NRDRVALEEDRRRAEQTKADTEYLARELASLRLAIGEVATRDYLRRELDE MAB_1523c|M.abscessus_ATCC_199 NRDRVALEEDRRRAEQTKADTEYLARELAALRLAVGEVATRDYLRRELEQ Mb1263c|M.bovis_AF2122/97 KRDRAVFEEDRRRAAQTKADTEYNARELAALRLAIGEVPTRDYLRHELDS Rv1231c|M.tuberculosis_H37Rv KRDRAVFEEDRRRAAQTKADTEYNARELAALRLAIGEVPTRDYLRHELDS MMAR_4210|M.marinum_M NRDRVLLDGDRRRAAQTKADTEYLARELAALRLAIGAVPTRDYLRHELES MAV_1370|M.avium_104 NRDRVALEEDRRRAAQTKADTEYLARELAAVRLAVGEVVTREYLRHELDD :***. :: ***** *******: *****::***:* * **:***:**:. Mflv_2207|M.gilvum_PYR-GCK IREMIEKLSGEK-DAEPGRAGKQDTGARKTKKSS Mvan_4489|M.vanbaalenii_PYR-1 IRELIQELHSRD-RAETGGASKRDAGERKSKKSG MSMEG_5066|M.smegmatis_MC2_155 IRDMISELQQPPPTTDRAGSGKGDGGERRSKRGG TH_2064|M.thermoresistible__bu LREMLSELQRHGGTGDTGDFGPPEPSGRPAPPSE MAB_1523c|M.abscessus_ATCC_199 LHEALESIREKNLL-------------------- Mb1263c|M.bovis_AF2122/97 LRALLAELQPTD--PDVAQPRVADEAEQHAKKSG Rv1231c|M.tuberculosis_H37Rv LRALLAELQPTD--PDVAQPRVADEAEQHAKKSG MMAR_4210|M.marinum_M LRDLVAELQSDQ--PDTET----DGTERRAKKTH MAV_1370|M.avium_104 LRELLAELRPQS--ADGEPVSGADNREQTAKKSR :: : .: