For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RISVDQDKCVSSGQCVLNAGELFDQRDDDGVVELLDDSPDPDQEDNARRAAAACPALAIEIHD*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_4857 | - | - | 100% (64) | hypothetical protein MSMEG_4857 |
M. smegmatis MC2 155 | MSMEG_0761 | - | 2e-10 | 43.55% (62) | hypothetical protein MSMEG_0761 |
M. smegmatis MC2 155 | MSMEG_6694 | - | 3e-07 | 40.62% (64) | hypothetical protein MSMEG_6694 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3533c | fdxD | 9e-07 | 40.00% (60) | ferredoxin FdxD |
M. gilvum PYR-GCK | Mflv_2417 | - | 3e-22 | 70.31% (64) | putative ferredoxin |
M. tuberculosis H37Rv | Rv3503c | fdxD | 9e-07 | 40.00% (60) | ferredoxin FdxD |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_4157c | - | 8e-07 | 43.33% (60) | ferredoxin FdxD |
M. marinum M | MMAR_4763 | - | 2e-17 | 57.81% (64) | ferredoxin |
M. avium 104 | MAV_0888 | - | 4e-19 | 64.52% (62) | hypothetical protein MAV_0888 |
M. thermoresistible (build 8) | TH_3399 | - | 7e-13 | 64.58% (48) | PUTATIVE - |
M. ulcerans Agy99 | MUL_0334 | - | 2e-17 | 56.25% (64) | ferredoxin |
M. vanbaalenii PYR-1 | Mvan_4235 | - | 3e-22 | 70.31% (64) | putative ferredoxin |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_4763|M.marinum_M MKVIVDENICASSGNCVMNAPEIFDQRDEDGVVVLLNANPPAELAEGARR MUL_0334|M.ulcerans_Agy99 MKVIVDENICASSGNCVMNAPEIFDQRDEDGVVVLLNANPPAELAEGARR MAV_0888|M.avium_104 --MTVDQDVCASSGNCVMNAPEVFDQRDDDGVVVLLNPHPTAEQAQGARR TH_3399|M.thermoresistible__bu ----------------VLNAAEVFDQRDEDGVVVLLNDDPAPELYQNVRN Mflv_2417|M.gilvum_PYR-GCK MRVAVDQDKCVSSGQCVLNAMEVFDQRDDDGVVELLNPEPGPEYAQQTRN Mvan_4235|M.vanbaalenii_PYR-1 MRVTVDQDKCVSSGQCVLNAGAVFDQRDDDGVVELLIPEPGPEYAEETRK MSMEG_4857|M.smegmatis_MC2_155 MRISVDQDKCVSSGQCVLNAGELFDQRDDDGVVELLDDSPDPDQEDNARR Mb3533c|M.bovis_AF2122/97 MRVIVDRDRCEGNAVCLGIAPDIFDLDDEDYAVVKTDPIP-VDQEDLAEQ Rv3503c|M.tuberculosis_H37Rv MRVIVDRDRCEGNAVCLGIAPDIFDLDDEDYAVVKTDPIP-VDQEDLAEQ MAB_4157c|M.abscessus_ATCC_199 MRVGVVPDRCEGNLVCLGIAPEVFDVDDDDYVVILQEEVP-ADQEDLVEQ : * :** *:* .* * : : ... MMAR_4763|M.marinum_M AAASCPALAIKIEE MUL_0334|M.ulcerans_Agy99 AAASCPAMAIKIEE MAV_0888|M.avium_104 AAAACPALAIRVEE TH_3399|M.thermoresistible__bu AAAACPAQAIQIEE Mflv_2417|M.gilvum_PYR-GCK AAAACPAMAIHIEE Mvan_4235|M.vanbaalenii_PYR-1 AATACPALAIHIEE MSMEG_4857|M.smegmatis_MC2_155 AAAACPALAIEIHD Mb3533c|M.bovis_AF2122/97 AIAECPRAALSRGE Rv3503c|M.tuberculosis_H37Rv AIAECPRAALSRGE MAB_4157c|M.abscessus_ATCC_199 AIAECPRAALIRKD * : ** *: :