For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
KVIVDENICASSGNCVMNAPEIFDQRDEDGVVVLLNANPPAELAEGARRAAASCPALAIKIEE*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_4763 | - | - | 100% (64) | ferredoxin |
M. marinum M | MMAR_2879 | - | 3e-08 | 41.94% (62) | ferredoxin |
M. marinum M | MMAR_4736 | - | 3e-07 | 41.67% (60) | ferredoxin |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3533c | fdxD | 1e-05 | 39.34% (61) | ferredoxin FdxD |
M. gilvum PYR-GCK | Mflv_2417 | - | 1e-18 | 62.50% (64) | putative ferredoxin |
M. tuberculosis H37Rv | Rv3503c | fdxD | 1e-05 | 39.34% (61) | ferredoxin FdxD |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1213c | - | 9e-06 | 34.92% (63) | putative ferredoxin |
M. avium 104 | MAV_0888 | - | 7e-25 | 77.42% (62) | hypothetical protein MAV_0888 |
M. smegmatis MC2 155 | MSMEG_4857 | - | 2e-17 | 57.81% (64) | hypothetical protein MSMEG_4857 |
M. thermoresistible (build 8) | TH_3399 | - | 8e-14 | 68.75% (48) | PUTATIVE - |
M. ulcerans Agy99 | MUL_0334 | - | 6e-32 | 98.44% (64) | ferredoxin |
M. vanbaalenii PYR-1 | Mvan_4235 | - | 4e-17 | 60.94% (64) | putative ferredoxin |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_4763|M.marinum_M --MKVIVDENICASSGNCVMNAPEIFDQRDEDGVVVLLNANPPAELAEGA MUL_0334|M.ulcerans_Agy99 --MKVIVDENICASSGNCVMNAPEIFDQRDEDGVVVLLNANPPAELAEGA MAV_0888|M.avium_104 ----MTVDQDVCASSGNCVMNAPEVFDQRDDDGVVVLLNPHPTAEQAQGA TH_3399|M.thermoresistible__bu ------------------VLNAAEVFDQRDEDGVVVLLNDDPAPELYQNV Mflv_2417|M.gilvum_PYR-GCK --MRVAVDQDKCVSSGQCVLNAMEVFDQRDDDGVVELLNPEPGPEYAQQT Mvan_4235|M.vanbaalenii_PYR-1 --MRVTVDQDKCVSSGQCVLNAGAVFDQRDDDGVVELLIPEPGPEYAEET MSMEG_4857|M.smegmatis_MC2_155 --MRISVDQDKCVSSGQCVLNAGELFDQRDDDGVVELLDDSPDPDQEDNA Mb3533c|M.bovis_AF2122/97 --MRVIVDRDRCEGNAVCLGIAPDIFD-LDDEDYAVVKTDPIPVDQEDLA Rv3503c|M.tuberculosis_H37Rv --MRVIVDRDRCEGNAVCLGIAPDIFD-LDDEDYAVVKTDPIPVDQEDLA MAB_1213c|M.abscessus_ATCC_199 MAYRVDVDTDLCQGHAMCELEAPDYFR-VPKRGTVEILNNEPPDDARDEI * * . . . : : : MMAR_4763|M.marinum_M RRAAASCPALAIKIEE- MUL_0334|M.ulcerans_Agy99 RRAAASCPAMAIKIEE- MAV_0888|M.avium_104 RRAAAACPALAIRVEE- TH_3399|M.thermoresistible__bu RNAAAACPAQAIQIEE- Mflv_2417|M.gilvum_PYR-GCK RNAAAACPAMAIHIEE- Mvan_4235|M.vanbaalenii_PYR-1 RKAATACPALAIHIEE- MSMEG_4857|M.smegmatis_MC2_155 RRAAAACPALAIEIHD- Mb3533c|M.bovis_AF2122/97 EQAIAECPRAALSRGE- Rv3503c|M.tuberculosis_H37Rv EQAIAECPRAALSRGE- MAB_1213c|M.abscessus_ATCC_199 ERAVEECPARALFITEK ..* ** *: :