For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SDPSPRTSPSGLPHDIDHTHSDVSGGWLRAATFGAMDGLVSNTALIAGVAASANAQTVVLSGVAGLLAGA FSMALGEYTSVTTANEQIDSEVKVERRSFRRHPQAERDELVGMLMEMGMSADTAEKATEEIHRDESRALN FHLVQELGVDPREKPSPVIAAVSSFVMFAVGAIIPLIPYLLGFESLWGGLACGGVGLLIAGGVAARFTRK RVSFAALRQLAFGGVAIAATYVVGTLIGTVTT*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_4473 | - | - | 100% (243) | integral membrane protein |
| M. smegmatis MC2 155 | MSMEG_1942 | - | 3e-34 | 39.27% (219) | integral membrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_2727 | - | 1e-101 | 76.60% (235) | hypothetical protein Mflv_2727 |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_1712 | - | 3e-81 | 62.66% (233) | hypothetical protein MAB_1712 |
| M. marinum M | MMAR_3630 | - | 8e-89 | 67.90% (243) | membrane protein |
| M. avium 104 | MAV_2114 | - | 1e-31 | 37.45% (235) | mebrane associated protein |
| M. thermoresistible (build 8) | TH_0728 | - | 5e-90 | 70.00% (230) | Integral membrane protein |
| M. ulcerans Agy99 | MUL_1234 | - | 1e-84 | 71.10% (218) | membrane protein |
| M. vanbaalenii PYR-1 | Mvan_5552 | - | 5e-33 | 40.45% (220) | hypothetical protein Mvan_5552 |
CLUSTAL 2.0.9 multiple sequence alignment
MSMEG_4473|M.smegmatis_MC2_155 MSDPSP-RTSPS-GLPHDIDHTHSDVSGGWLRAATFGAMDGLVSNTALIA
Mflv_2727|M.gilvum_PYR-GCK MAQSAGGPYSPT-GKPHVADHAHADVTGGWLRAATFGAMDGLVSNTALIA
MMAR_3630|M.marinum_M MSTPEPTDSNHNPESALDVGHAHSDVSGGWLRAAAFGAMDGLVSNTSLIA
MUL_1234|M.ulcerans_Agy99 -------------------------MSGGWLRAAAFGAMDGLVSNTSLIA
TH_0728|M.thermoresistible__bu MG-----PSRHRGKLPHEFDHQHGDVSGGWLRAATFGAMDGLVSNTALIA
MAB_1712|M.abscessus_ATCC_1997 MAIDG---STGSAELPHEFDHTHPDVSGGWLRAATFGAMDGLVTNTALVA
MAV_2114|M.avium_104 MS------STPHPAEPH-IGSVSSKLN--WLRAGVLGANDGIVSTAGIVV
Mvan_5552|M.vanbaalenii_PYR-1 MK------SQSHPAEPH-LGSVASKLN--WLRAGVLGANDGIVSTAGIVV
:. ****..:** **:*:.:.::.
MSMEG_4473|M.smegmatis_MC2_155 GVAAS-ANAQTVVLSGVAGLLAGAFSMALGEYTSVTTANEQIDSEVKVER
Mflv_2727|M.gilvum_PYR-GCK GVAAS-ADAHTVVISGVAGLLAGAFSMALGEYTSVMTANEQIESEVRVER
MMAR_3630|M.marinum_M GVAAA-ESVHATIVSGIAGLLAGAFSMALGEFTSVTTANEQIDSEVHVER
MUL_1234|M.ulcerans_Agy99 GVAAA-ESVHATIVSGIAGLLAGAFSMALGEFTSVTTANEQIDSEVHVER
TH_0728|M.thermoresistible__bu GVGAA-ADAETVVLGGFAGLAAGAFSMALGEYTSVQTANEQVESEVRVER
MAB_1712|M.abscessus_ATCC_1997 GVGASGLDAHAIVLTGAASLVAGAFSMALGEFTSVSTSNSQIEHEASVER
MAV_2114|M.avium_104 GVAAATALRAPILTAGSAGLVAGAVSMALGEYVSVSTQRDTEKALLIQEH
Mvan_5552|M.vanbaalenii_PYR-1 GVAAATAERGPILTAGIAGLAAGAVSMALGEYVSVSTQRDTEKALLGKER
**.*: . : * *.* ***.******:.** * .. . *:
MSMEG_4473|M.smegmatis_MC2_155 RSFRRHPQAERDELVGMLMEMGMSADTAEKATEEIHRDESRALNFHLVQE
Mflv_2727|M.gilvum_PYR-GCK RSFENHPQAERAELVAMLTDMGMTPETATKATEEIHRDEAKAMNFHLVQE
MMAR_3630|M.marinum_M RALRARPQAERAELVAMLVDMGMTEKTAQTATDEIHRDENRAVNFHMVGE
MUL_1234|M.ulcerans_Agy99 RALRARPQAERAELVAMLVDMGMTEKTAQTATDEIHRDENRAVNFHMVGE
TH_0728|M.thermoresistible__bu RAIRMYPRAEAAELARSLQEIGLSRETAERAAVEIHRDEDTAVNVHLVRE
MAB_1712|M.abscessus_ATCC_1997 RAIQLHPDAEKQELISMLGDIGLSPQTAAAAADEIHRDENTAVTIHLTRE
MAV_2114|M.avium_104 QELRDDPAAELDELAALYEAKGLTAATARTVAEELT--DQNPLLAHAEVE
Mvan_5552|M.vanbaalenii_PYR-1 QELRDDPAAELEELVALYEAKGISAATARTVAEELT--EHDAFAAHAEIE
: :. * ** ** *:: ** .: *: : .. * *
MSMEG_4473|M.smegmatis_MC2_155 LGVDPREKPSPVIAAVSSFVMFAVGAIIPLIPYLLGFESLWGGLACGG--
Mflv_2727|M.gilvum_PYR-GCK LGVDPREKPSPWVAALSSFFLFAIGAVIPLVPYLLGYESLWAGLACGG--
MMAR_3630|M.marinum_M IGVHPAEKPSASAAAISSFAMFAIGAVMPLIPYLLGFGSLSAGLIFGG--
MUL_1234|M.ulcerans_Agy99 IGVHPAEKPSASAAAISSFAMFAIGAVMPLIPYLLGFGSLSAGLIFGG--
TH_0728|M.thermoresistible__bu IGVDPQETPSPPVAAVSSFLTFALGALIPLIPYLLGFESLWLGLSAGG--
MAB_1712|M.abscessus_ATCC_1997 LGINPNETPSPWVAALSSFVTFSVGAVVPLIPFLLGFASLLAGLICGG--
MAV_2114|M.avium_104 LGINPEELTNPWHAASSSALSFAIGALLPLIAILLPPPTWRIPVTVVAVL
Mvan_5552|M.vanbaalenii_PYR-1 LGITPGELTNPWQAALSSALSFTVGALLPLIAILLPPTTWRVPVTVISVL
:*: * * ... ** ** *::**::**:. ** : : .
MSMEG_4473|M.smegmatis_MC2_155 VGLLIAGGVAARFTRKRVSFAALRQLAFGGVAIAATYVVGTLIGTVTT
Mflv_2727|M.gilvum_PYR-GCK VGLLLAGAAAARFTRRPRIRSAVRQLLLGGAAIALTYLVGYLIGVSVT
MMAR_3630|M.marinum_M AGLLIAGGVTARFTRKAIWWSAFRQLLFGSVAVAATYLVGLLIASVM-
MUL_1234|M.ulcerans_Agy99 AGLLIAGGVTARFTRKAIWWSAFRQLLFGSVAVAATYLVGLLIASVM-
TH_0728|M.thermoresistible__bu LGLILVGAVTSRFTRKPLWFASGRQLLFGLLAIAATYAVGSLVGAVT-
MAB_1712|M.abscessus_ATCC_1997 VGLLIAGWVAGSFTSRPRWLSALRQLTFGAIAIGATYLIGHLIGVAVN
MAV_2114|M.avium_104 IALVITGAVSARLGGAPQLRAVARNAIGGSLALAVTYTIGHVVGAAID
Mvan_5552|M.vanbaalenii_PYR-1 IALVITGAVSAGLGGAPKQRAVLRNLIGGGLALMITYGIGHLVGAAVT
.*::.* .:. : : *: * *: ** :* ::.