For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
STPEPTDSNHNPESALDVGHAHSDVSGGWLRAAAFGAMDGLVSNTSLIAGVAAAESVHATIVSGIAGLLA GAFSMALGEFTSVTTANEQIDSEVHVERRALRARPQAERAELVAMLVDMGMTEKTAQTATDEIHRDENRA VNFHMVGEIGVHPAEKPSASAAAISSFAMFAIGAVMPLIPYLLGFGSLSAGLIFGGAGLLIAGGVTARFT RKAIWWSAFRQLLFGSVAVAATYLVGLLIASVM*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_3630 | - | - | 100% (244) | membrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_2727 | - | 3e-83 | 70.00% (220) | hypothetical protein Mflv_2727 |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1712 | - | 3e-74 | 58.80% (233) | hypothetical protein MAB_1712 |
M. avium 104 | MAV_2114 | - | 3e-30 | 36.18% (246) | mebrane associated protein |
M. smegmatis MC2 155 | MSMEG_4473 | - | 8e-89 | 67.90% (243) | integral membrane protein |
M. thermoresistible (build 8) | TH_0728 | - | 1e-77 | 60.85% (235) | Integral membrane protein |
M. ulcerans Agy99 | MUL_1234 | - | 1e-118 | 100.00% (219) | membrane protein |
M. vanbaalenii PYR-1 | Mvan_5552 | - | 7e-29 | 37.61% (218) | hypothetical protein Mvan_5552 |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_3630|M.marinum_M MSTPEPTDSNHNPESALDVGHAHSDVSGGWLRAAAFGAMDGLVSNTSLIA MUL_1234|M.ulcerans_Agy99 -------------------------MSGGWLRAAAFGAMDGLVSNTSLIA Mflv_2727|M.gilvum_PYR-GCK MAQSAGGPYSPT-GKPHVADHAHADVTGGWLRAATFGAMDGLVSNTALIA MSMEG_4473|M.smegmatis_MC2_155 MSDPSP-RTSPS-GLPHDIDHTHSDVSGGWLRAATFGAMDGLVSNTALIA TH_0728|M.thermoresistible__bu MG-----PSRHRGKLPHEFDHQHGDVSGGWLRAATFGAMDGLVSNTALIA MAB_1712|M.abscessus_ATCC_1997 MAIDG---STGSAELPHEFDHTHPDVSGGWLRAATFGAMDGLVTNTALVA MAV_2114|M.avium_104 MS------STPHPAEPH-IGSVSSKLN--WLRAGVLGANDGIVSTAGIVV Mvan_5552|M.vanbaalenii_PYR-1 MK------SQSHPAEPH-LGSVASKLN--WLRAGVLGANDGIVSTAGIVV :. ****..:** **:*:.:.::. MMAR_3630|M.marinum_M GVAAA-ESVHATIVSGIAGLLAGAFSMALGEFTSVTTANEQIDSEVHVER MUL_1234|M.ulcerans_Agy99 GVAAA-ESVHATIVSGIAGLLAGAFSMALGEFTSVTTANEQIDSEVHVER Mflv_2727|M.gilvum_PYR-GCK GVAAS-ADAHTVVISGVAGLLAGAFSMALGEYTSVMTANEQIESEVRVER MSMEG_4473|M.smegmatis_MC2_155 GVAAS-ANAQTVVLSGVAGLLAGAFSMALGEYTSVTTANEQIDSEVKVER TH_0728|M.thermoresistible__bu GVGAA-ADAETVVLGGFAGLAAGAFSMALGEYTSVQTANEQVESEVRVER MAB_1712|M.abscessus_ATCC_1997 GVGASGLDAHAIVLTGAASLVAGAFSMALGEFTSVSTSNSQIEHEASVER MAV_2114|M.avium_104 GVAAATALRAPILTAGSAGLVAGAVSMALGEYVSVSTQRDTEKALLIQEH Mvan_5552|M.vanbaalenii_PYR-1 GVAAATAERGPILTAGIAGLAAGAVSMALGEYVSVSTQRDTEKALLGKER **.*: . : * *.* ***.******:.** * .. . *: MMAR_3630|M.marinum_M RALRARPQAERAELVAMLVDMGMTEKTAQTATDEIHRDENRAVNFHMVGE MUL_1234|M.ulcerans_Agy99 RALRARPQAERAELVAMLVDMGMTEKTAQTATDEIHRDENRAVNFHMVGE Mflv_2727|M.gilvum_PYR-GCK RSFENHPQAERAELVAMLTDMGMTPETATKATEEIHRDEAKAMNFHLVQE MSMEG_4473|M.smegmatis_MC2_155 RSFRRHPQAERDELVGMLMEMGMSADTAEKATEEIHRDESRALNFHLVQE TH_0728|M.thermoresistible__bu RAIRMYPRAEAAELARSLQEIGLSRETAERAAVEIHRDEDTAVNVHLVRE MAB_1712|M.abscessus_ATCC_1997 RAIQLHPDAEKQELISMLGDIGLSPQTAAAAADEIHRDENTAVTIHLTRE MAV_2114|M.avium_104 QELRDDPAAELDELAALYEAKGLTAATARTVAEELT--DQNPLLAHAEVE Mvan_5552|M.vanbaalenii_PYR-1 QELRDDPAAELEELVALYEAKGISAATARTVAEELT--EHDAFAAHAEIE : :. * ** ** *:: ** .: *: : .. * * MMAR_3630|M.marinum_M IGVHPAEKPSASAAAISSFAMFAIGAVMPLIPYLLGFGSLSAGLIFGG-- MUL_1234|M.ulcerans_Agy99 IGVHPAEKPSASAAAISSFAMFAIGAVMPLIPYLLGFGSLSAGLIFGG-- Mflv_2727|M.gilvum_PYR-GCK LGVDPREKPSPWVAALSSFFLFAIGAVIPLVPYLLGYESLWAGLACGG-- MSMEG_4473|M.smegmatis_MC2_155 LGVDPREKPSPVIAAVSSFVMFAVGAIIPLIPYLLGFESLWGGLACGG-- TH_0728|M.thermoresistible__bu IGVDPQETPSPPVAAVSSFLTFALGALIPLIPYLLGFESLWLGLSAGG-- MAB_1712|M.abscessus_ATCC_1997 LGINPNETPSPWVAALSSFVTFSVGAVVPLIPFLLGFASLLAGLICGG-- MAV_2114|M.avium_104 LGINPEELTNPWHAASSSALSFAIGALLPLIAILLPPPTWRIPVTVVAVL Mvan_5552|M.vanbaalenii_PYR-1 LGITPGELTNPWQAALSSALSFTVGALLPLIAILLPPTTWRVPVTVISVL :*: * * ... ** ** *::**::**:. ** : : . MMAR_3630|M.marinum_M AGLLIAGGVTARFTRKAIWWSAFRQLLFGSVAVAATYLVGLLIASVM- MUL_1234|M.ulcerans_Agy99 AGLLIAGGVTARFTRKAIWWSAFRQLLFGSVAVAATYLVGLLIASVM- Mflv_2727|M.gilvum_PYR-GCK VGLLLAGAAAARFTRRPRIRSAVRQLLLGGAAIALTYLVGYLIGVSVT MSMEG_4473|M.smegmatis_MC2_155 VGLLIAGGVAARFTRKRVSFAALRQLAFGGVAIAATYVVGTLIGTVTT TH_0728|M.thermoresistible__bu LGLILVGAVTSRFTRKPLWFASGRQLLFGLLAIAATYAVGSLVGAVT- MAB_1712|M.abscessus_ATCC_1997 VGLLIAGWVAGSFTSRPRWLSALRQLTFGAIAIGATYLIGHLIGVAVN MAV_2114|M.avium_104 IALVITGAVSARLGGAPQLRAVARNAIGGSLALAVTYTIGHVVGAAID Mvan_5552|M.vanbaalenii_PYR-1 IALVITGAVSAGLGGAPKQRAVLRNLIGGGLALMITYGIGHLVGAAVT .*::.* .:. : : *: * *: ** :* ::.