For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TSPFAELNTTDRILAGACAVAWLAALGAGVAALVALVDLGRGHTQAVESTETPWLLYTVIGISVLVIAAA IPLLLRARAQADSRPPARSQGPRREPVAPRRVGYTAPTYRQDAVATAFVEKVWLRFVLSVTCALGVATAV IGLGTYLLATDHSTAAWCAYGLAGLVTLGMIALPIIAIRELDRSAA*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_4264 | - | - | 100% (187) | hypothetical protein MSMEG_4264 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2220c | - | 3e-34 | 41.58% (190) | transmembrane protein |
M. gilvum PYR-GCK | Mflv_2952 | - | 2e-39 | 43.63% (204) | hypothetical protein Mflv_2952 |
M. tuberculosis H37Rv | Rv2197c | - | 3e-34 | 41.58% (190) | transmembrane protein |
M. leprae Br4923 | MLBr_00878 | - | 3e-29 | 39.47% (190) | hypothetical protein MLBr_00878 |
M. abscessus ATCC 19977 | MAB_1964 | - | 2e-22 | 31.92% (213) | hypothetical protein MAB_1964 |
M. marinum M | MMAR_3241 | - | 6e-33 | 40.11% (187) | transmembrane protein |
M. avium 104 | MAV_2294 | - | 1e-33 | 41.40% (186) | hypothetical protein MAV_2294 |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_3554 | - | 8e-33 | 40.11% (187) | transmembrane protein |
M. vanbaalenii PYR-1 | Mvan_3561 | - | 2e-43 | 48.48% (198) | hypothetical protein Mvan_3561 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_2952|M.gilvum_PYR-GCK --MTHLTDSANRSGAGFDAAALDRTDRLLLGGCAVIWLAALGAAVAAVVA Mvan_3561|M.vanbaalenii_PYR-1 --MTNLTDTT-RTRRGFDVAALDRTDRILLGAAVVVWLAALGAGVAATVA MSMEG_4264|M.smegmatis_MC2_155 --MTSP------------FAELNTTDRILAGACAVAWLAALGAGVAALVA Mb2220c|M.bovis_AF2122/97 --MVSR-YSAYRR--GPDVISPDVIDRILVGACAAVWLVFTGVSVAAAVA Rv2197c|M.tuberculosis_H37Rv --MVSR-YSAYRR--GPDVISPDVIDRILVGACAAVWLVFTGVSVAAAVA MAV_2294|M.avium_104 --MVSK-YSAYRRGLGDDTVSPEVIDRILIGACAAIYLALLGVSVAACVA MLBr_00878|M.leprae_Br4923 --MMNR-YSPYRR--GSDTIASDVIDRILVGVCAAVWLVLIGVSVAAAVA MMAR_3241|M.marinum_M --MLGK-YSAYRRG-PEGVVAPEVVDRVLIGACAAVWLALVGVGVAAVVA MUL_3554|M.ulcerans_Agy99 --MLGK-YSAYRRG-PEGVVAPEVVDRILIGACAAVWLALVGVGVAAVVA MAB_1964|M.abscessus_ATCC_1997 MPAGRLAKPLEAIAGPLRRSSPESVDRMLIGLCAVIWLAFVGMLVGAIVV : **:* * ... :*. * *.* *. Mflv_2952|M.gilvum_PYR-GCK LIDLSRGHATSSADSGTPWVLYTVIGVSAAVIVASVPLLLRARRAPDDEL Mvan_3561|M.vanbaalenii_PYR-1 LVDLSRGHVESAADSGTPWVLYTIIGISAAVIVAAVPLLLRARRTAEADA MSMEG_4264|M.smegmatis_MC2_155 LVDLGRGHTQAVESTETPWLLYTVIGISVLVIAAAIPLLLRARAQADSRP Mb2220c|M.bovis_AF2122/97 LMDLGRGFHEMAGNPHTTWVLYAVIVVSALVIVGAIPVLLRARRMAEAEP Rv2197c|M.tuberculosis_H37Rv LMDLGRGFHEMAGNPHTTWVLYAVIVVSALVIVGAIPVLLRARRMAEAEP MAV_2294|M.avium_104 LADLGRGFHKAASSPHTTWVLYAVIIVSALIIAGAIPILLRARRMSQAEP MLBr_00878|M.leprae_Br4923 LEDLGRGFHKIASDPHTTWVLYGIIVVSVLIIAGAVPVLLWARRVARVEP MMAR_3241|M.marinum_M LADLGRGVQKISKDSHSSWVLYAVIVVSALIIVGAVPMLLRARRMAETGP MUL_3554|M.ulcerans_Agy99 LADLGRGVKKISKDSHSSWVLYAVIVVSALIIVGAVPMLLRARRMAETGP MAB_1964|M.abscessus_ATCC_1997 IAGMG----EDSGSSGSSWGIYIVIGVSLAVIVGAVPLLLRARKSAAQRT : .:. .. :.* :* :* :* :*..::*:** ** . Mflv_2952|M.gilvum_PYR-GCK T--PVEQRLARQAAERT-QTPARPVDAPTEKLRVPPPPV----------D Mvan_3561|M.vanbaalenii_PYR-1 P--AAPQRPVTETAP---PPPARGIDAPTEKLRAARP------------S MSMEG_4264|M.smegmatis_MC2_155 P--ARSQGPRREPVA----PRRVGYTAPTYRQDAVAT------------- Mb2220c|M.bovis_AF2122/97 A--TRPTGASVRGGRS--IGSGHPAKRAVAES-APVQH------------ Rv2197c|M.tuberculosis_H37Rv A--TRPTGASVRGGRS--IGSGHPAKRAVAES-APVQH------------ MAV_2294|M.avium_104 T--ARAMTAPARPPVR--LGAG--IARPATER-APHTP------------ MLBr_00878|M.leprae_Br4923 P--IRPAGVPERGGVRQLVSAGRSTARIEVERVCAEER------------ MMAR_3241|M.marinum_M L--VTSVPLRRTGGQP--LRTANATMRAADRS-ARRDH------------ MUL_3554|M.ulcerans_Agy99 L--VTSVPLRRTGGQP--LRTANATMRAADRS-ARRDH------------ MAB_1964|M.abscessus_ATCC_1997 ARGASKTAPKPKGANSSGGATAPSGPPPTEASTEKLKTFGGLADHVSHVP Mflv_2952|M.gilvum_PYR-GCK TNSGRLPRILQSPVSPAVIDSPAVDRLWLRNTAAVAAAMGTATLLVSAAT Mvan_3561|M.vanbaalenii_PYR-1 EGSGPLPRALRSSAAP---VSAVTDQVFLRCTASIASAMGVATLLVSVST MSMEG_4264|M.smegmatis_MC2_155 ---------------------AFVEKVWLRFVLSVTCALGVATAVIGLGT Mb2220c|M.bovis_AF2122/97 ---------ADAFEVAAEWSSEAVDRIWLRGTVVLTSAIGIALIAVAAAT Rv2197c|M.tuberculosis_H37Rv ---------ADAFEVAAEWSSEAVDRIWLRGTVVLTSAIGIALIAVAAAT MAV_2294|M.avium_104 ---------ATPPDVG--WSGEAVDRIWLRGTVILTGTMGAALIAVATAT MLBr_00878|M.leprae_Br4923 ---------VQSVAQPGEWFDAAVDRIWLRGTVGLTGTMGAALVAVAAST MMAR_3241|M.marinum_M ---------ANGRSEGTQWSSEAVDRVWLRGTVALVGTIGIALIAVGAAT MUL_3554|M.ulcerans_Agy99 ---------ANGRSEGTEWSSEAVDRVWLRGTVALVGTIGIALIAVGAAT MAB_1964|M.abscessus_ATCC_1997 KDYNGPGSPAYRAATEAAAKRAVINRLWLRATVGIAGAIGLALLAVVTGT ::::** . :. ::* * : .* Mflv_2952|M.gilvum_PYR-GCK YLMAVDSETASWVLYGVAGVVTVGMVAIPWYFLRELRAELGS--- Mvan_3561|M.vanbaalenii_PYR-1 YLMAVDSDTAAWVLYGVVGVVTVGMVAIPWYFLRELRTDTVS--- MSMEG_4264|M.smegmatis_MC2_155 YLLATDHSTAAWCAYGLAGLVTLGMIALPIIAIRELDRSAA---- Mb2220c|M.bovis_AF2122/97 YLMAVGHDGPSWISYGLAGVVTAGMPVIEWLYSRQLRRVVAPQSS Rv2197c|M.tuberculosis_H37Rv YLMAVGHDGPSWISYGLAGVVTAGMPVIEWLYARQLRRVVAPQSS MAV_2294|M.avium_104 YLMAVGHDGSSWVGYGFAGVITAAMPVVEWLHIRQLREAVAEQ-- MLBr_00878|M.leprae_Br4923 YLMAVGRDGASWVGYVLAGIVTAVMPVIEWIYVRQLRRVG----- MMAR_3241|M.marinum_M NLMAVGHDGASWVAYGLAGIVTAGMPAIEWFYVRQLRRVSVK--- MUL_3554|M.ulcerans_Agy99 NLMAVGHDGASWVAYGLGGIVTAGMPAIEWFYVRQLRRVSVK--- MAB_1964|M.abscessus_ATCC_1997 YLLAVESDTAAVIAFVFAGVITCAMGAIPWVTLKKLRELGSSGS- *:*. . .: : . *::* * .: ::*