For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RQTGSLRPILVPVWILVLVAALAGCATRTDDQPTESAPPPAQQAPPTPAEIRAIAKDAYIWGFPLVDNYR VQYSYFVDKTDPEYKGGFNEVHNTARLYTPADKAIQTPNADTPYSFVGADLRTEPLVFTVPPIEQNRYFS LQFVDGYTYNVAYVGSRTTGNGGGRYLLAGPGWEGEKPEGVDEIIRSDTDLAFVLYRTQLFGPRDLDNIK KIQAGYQVAPLSVYLKQPSPPPAPPIDFTPPLTPEAQKTSPQFFEILNAALRYAPVKPEEQEMRERFARI GIGPDGDFDADKLSPETREAIEDGMANAWVEFDRFKQDKVDTGEVGSAQLFGTADDLKGNYLYRMAGAVL GIYGNTAAEALYPSAMLDADGQPLTGTNSYTYRFAPDQLPPVNAFWSLTIYELPSSQLVDNPIDRYLINS EMLPSLVPDPDGAYTLRIQNTQPPENEANWLPAPKGPFTLVLRLYWPKPDALNGTWQAPKPEKI*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_4187 | - | - | 100% (485) | hypothetical protein MSMEG_4187 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_3051 | - | 0.0 | 75.64% (472) | hypothetical protein Mflv_3051 |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3998 | - | 8e-64 | 34.30% (449) | hypothetical protein MAB_3998 |
M. marinum M | MMAR_2611 | - | 3e-49 | 30.61% (441) | hypothetical protein MMAR_2611 |
M. avium 104 | - | - | - | - | - |
M. thermoresistible (build 8) | TH_3203 | - | 5e-53 | 33.50% (403) | PUTATIVE putative conserved hypothetical protein |
M. ulcerans Agy99 | MUL_3150 | - | 5e-49 | 30.18% (444) | hypothetical protein MUL_3150 |
M. vanbaalenii PYR-1 | Mvan_3476 | - | 0.0 | 72.81% (467) | hypothetical protein Mvan_3476 |
CLUSTAL 2.0.9 multiple sequence alignment MAB_3998|M.abscessus_ATCC_1997 -----------MKIWCTQWTKLLVVMSTVALATGLTSCSKEPGSQKLSAD TH_3203|M.thermoresistible__bu -------------------------------------------------- MMAR_2611|M.marinum_M -------------------------MSTLSSG------------------ MUL_3150|M.ulcerans_Agy99 -------------------------MSTLSSG------------------ Mflv_3051|M.gilvum_PYR-GCK -----MLRRSIAALAALVLLVGCS-TDSSSQQADTSTSSPSETAAAVTPA Mvan_3476|M.vanbaalenii_PYR-1 -----MLRRLTAAAAALLLLAGCG-TDSSAP-EDTSTSSAPETAAAVSPE MSMEG_4187|M.smegmatis_MC2_155 MRQTGSLRPILVPVWILVLVAALAGCATRTDDQPTESAPPPAQQAPPTPA MAB_3998|M.abscessus_ATCC_1997 EAKSIAMDAYVYGYALVTMEMTRRVMTNVEKAEPPRA-PMGQLMRMREYP TH_3203|M.thermoresistible__bu ---------------------------------------MNQLAHLGFLP MMAR_2611|M.marinum_M -LRTLSYEAFIYFYPLVMMDVTRLQALNAAPGTGPGAGPPNHFSHMRAFP MUL_3150|M.ulcerans_Agy99 -LRTLSYEAFIYFYPLVMMDVTRLQALNAAPSTGPGAGPPNHFSHMRAFP Mflv_3051|M.gilvum_PYR-GCK EARAIAKDAYVYGFPLVDN-YRVQYSYFVDKEDPEYKGGWNQIHNTARLY Mvan_3476|M.vanbaalenii_PYR-1 EARAIAKEAYVYGFPMVDN-YRVQYSYFVDKQDPEYKGGWNEVHNTARVY MSMEG_4187|M.smegmatis_MC2_155 EIRAIAKDAYIWGFPLVDN-YRVQYSYFVDKTDPEYKGGFNEVHNTARLY ... . MAB_3998|M.abscessus_ATCC_1997 NAAFRDVTAPNADTLYTNGFIDVGKEPWILSLPEAD-GRYYLFPMLDGFT TH_3203|M.thermoresistible__bu TAEFTGVVRPNVDTLYTSMFFDVSAEPLIVTVPPMG-DRYHLFPLLDMWT MMAR_2611|M.marinum_M SADFRAVVRPNFDTLYSSAWLDLRNGPVRLQSADTD-DRYYMLPMLDMWT MUL_3150|M.ulcerans_Agy99 SADFRAVVRPNFDTLYSSAWLDLRNGPVRLQSADTD-DRYYMLPMLDMWT Mflv_3051|M.gilvum_PYR-GCK TPEDKAIQTPNSDTPYSFVGADLRTEPLVLTVPPIQQDRYYSLQFIDGYT Mvan_3476|M.vanbaalenii_PYR-1 TPEDTAIQTPNSDTPYSFVGADLRAEPLVLTVPPVQQDRYYSLQFVDGYT MSMEG_4187|M.smegmatis_MC2_155 TPADKAIQTPNADTPYSFVGADLRTEPLVFTVPPIEQNRYFSLQFVDGYT .. : ** ** *: *: * . . .**. : ::* :* MAB_3998|M.abscessus_ATCC_1997 NVFEVPGKRTTGTG--PQTYAITGPGWKG------TLPQGVQEYK-SPTA TH_3203|M.thermoresistible__bu NVDASPGTRTVDDAGTGYEFAIVGPNWHG------DLPEGVREYR-SATD MMAR_2611|M.marinum_M DVFANPGKRTSGTG--PLDLVIAGPGYQGESGE---QPRPTTVVA-APTP MUL_3150|M.ulcerans_Agy99 DVFANPGKRTSGTG--PLDLVIAGPGYQGESGESGEQPRPTTVVA-APTP Mflv_3051|M.gilvum_PYR-GCK YNFAYVGSRTTGNG--GGTYLLAGPGWQG------EKPEGVDEVIRSDTE Mvan_3476|M.vanbaalenii_PYR-1 YNFAYVGSRTAGNG--GGRYLLAGPGWQG------EKPEGIDEVIRSDTE MSMEG_4187|M.smegmatis_MC2_155 YNVAYVGSRTTGNG--GGRYLLAGPGWEG------EKPEGVDEIIRSDTD *.** . . :.**.:.* *. : * MAB_3998|M.abscessus_ATCC_1997 LVWLLGRIYCTGTPEDYAAVHTLQDAISLVPLSSYGKPYTP-AAGHVDPS TH_3203|M.thermoresistible__bu AGWMIGRIQVNG-PEDMPAVIDLQNAMTAVPLSAHGTPYEPPGNADLRPD MMAR_2611|M.marinum_M FVWIIGRTQTNG-PADYPAVHRVQDGYSLTELGSG----AQASAGDKRPD MUL_3150|M.ulcerans_Agy99 FVWIIGRTQTNG-PADYPAVHRVQDGYFLTELGSG----AQASAGDKRPD Mflv_3051|M.gilvum_PYR-GCK LAFVLYRTQLLG-PSDLDGVKDVQAGYQVAPLSVFLNQPSPEPAPAIDFV Mvan_3476|M.vanbaalenii_PYR-1 LAFVLYRTQLFG-PSDIEEVRKIQAGYQAAPLSVYLNRPPPPPAPAIDFV MSMEG_4187|M.smegmatis_MC2_155 LAFVLYRTQLFG-PRDLDNIKKIQAGYQVAPLSVYLKQPSPPPAPPIDFT ::: * * * * : :* . . *. MAB_3998|M.abscessus_ATCC_1997 IDMTTPVREQVNNLSTKAYFDLLATLLKDNPPAEADKPILEKMATIGIEP TH_3203|M.thermoresistible__bu WPRGREVSRYIHDLSPQQYWDLFYSGLSHDQPRPGDEVLLERLAAVGWSP MMAR_2611|M.marinum_M FDLTTEPPRIVNGMAALDYLSYAADLLCVNPPHPTDYSVLARLANLGIEA MUL_3150|M.ulcerans_Agy99 FDLTTEPPRIVNGMAALDYLSYAADLLCVNSPHPTDYSVLARLANLGIEA Mflv_3051|M.gilvum_PYR-GCK PPLTPD-----QQRTSPQFFEILNFALRYAPVLPQEQALRDRFATIGIGP Mvan_3476|M.vanbaalenii_PYR-1 PPLTPE-----QQRTSPQFFEILNFVMRFAPALPEETALRERFARIGIGP MSMEG_4187|M.smegmatis_MC2_155 PPLTPE-----AQKTSPQFFEILNAALRYAPVKPEEQEMRERFARIGIGP :. : . : : : ::* :* . MAB_3998|M.abscessus_ATCC_1997 GKPFDTDKLGTQTVSALESVPKEAFAKIMAH-FKEAGNNINGWVFT-TKT TH_3203|M.thermoresistible__bu TEKLDLAQLPDDERDVWEQAWPQALSQIEVD-LGSE--EVNGWLLARTGL MMAR_2611|M.marinum_M GSPFDASRFDADQVAELERGRSDALNDILKS-ATKLGANVDGWISLTESM MUL_3150|M.ulcerans_Agy99 GSPFDASRFDADQVAELERGRSDALNDILKS-ATKLGANVDGWISLTESM Mflv_3051|M.gilvum_PYR-GCK DGDYDADALTPEMRAAVEAGMADAWTEYDTFKKDKVETGEVTSAQFFGTR Mvan_3476|M.vanbaalenii_PYR-1 DGDFDADSLSPQMRAAIEGGMADGNAELDAFKKNEMDTGNVTSAQLFGSR MSMEG_4187|M.smegmatis_MC2_155 DGDFDADKLSPETREAIEDGMANAWVEFDRFKQDKVDTGEVGSAQLFGTA * : : * :. . . MAB_3998|M.abscessus_ATCC_1997 GQYGTDYLQRALITAIGLGANRPQDAVYPTSEVDNTGKPYDGANKYVLHF TH_3203|M.thermoresistible__bu GDYGTDYATRAVVAHGGLGANLPSDAVYPTVRVDDTGAQLNAANDYVLRF MMAR_2611|M.marinum_M GVYGNNYLRRAVVALIGLGANPAEDAVYPFLATDEHGDPLAGEHDYVIHF MUL_3150|M.ulcerans_Agy99 GVYGNNYLRRAVVALIGLGANPAEDAVYPFLATDEHGDPLAGEHDYVIHF Mflv_3051|M.gilvum_PYR-GCK EDLKDNYLYRMAGAVLGIYGNTAAEAIYPAAFNDAAGAPLTGANNYVYRF Mvan_3476|M.vanbaalenii_PYR-1 QELGDNYLFRMAGAAYGIYGNTAAEAIYPNFSNDAAGQPLTGANRYVFRF MSMEG_4187|M.smegmatis_MC2_155 DDLKGNYLYRMAGAVLGIYGNTAAEALYPSAMLDADGQPLTGTNSYTYRF :* * : *: .* . :*:** * * . : *. :* MAB_3998|M.abscessus_ATCC_1997 DKGQFPPAEGFWSLTMYDA-GMFFVDNPLGRYTLSQ--RNTFTPNPDGSV TH_3203|M.thermoresistible__bu SPEDLPPVRGFWSLTLYDD-RGFFVDNPLDRYALR---GERLTTNPDGSV MMAR_2611|M.marinum_M DADKLPPVDAFWSVTMYDA-EGFQVANELNRFAIGD--RDELRYNDDGSL MUL_3150|M.ulcerans_Agy99 DADKLPPVDAFWSVTMYDA-EGFQVANELNRFAIGD--RDELRYNDDGSL Mflv_3051|M.gilvum_PYR-GCK APGQLPPVNAFWSLTMYELPGSVLVANPMNRYLISSTMLPSLVRDPDGGY Mvan_3476|M.vanbaalenii_PYR-1 PSGGLPPVNAFWSLTMYELPASLLVENPINRYLINSAMLPSVVPDPDGGY MSMEG_4187|M.smegmatis_MC2_155 APDQLPPVNAFWSLTIYELPSSQLVDNPIDRYLINSEMLPSLVPDPDGAY :**. .***:*:*: * * :.*: : . : **. MAB_3998|M.abscessus_ATCC_1997 DLYLQHQNPGPEKEANWLPAP-TGKFNLMLRLYWPKETPPSIIDGTWKPP TH_3203|M.thermoresistible__bu DVYVRHEPPGSDREANWLPTPETGDFNLMLRLYWP---EAEILDGGWNPP MMAR_2611|M.marinum_M DLCLAHTDPGPERQSNWLPAP-LGPLGVTMRLYAP---RPEVVAGEWSPP MUL_3150|M.ulcerans_Agy99 DLYLAHTDPGPERQSNWLPAP-LGPLGVTMRLYAP---RPEVVAGEWSPP Mflv_3051|M.gilvum_PYR-GCK TFTVQNASPGIEKESNWLPAP-KGPFGLVLRLYWP---KPDALNGTWTAP Mvan_3476|M.vanbaalenii_PYR-1 TFYIQNESPGIDKEANWLPAP-KGPFALVLRLYWP---KPDALNGSWRSP MSMEG_4187|M.smegmatis_MC2_155 TLRIQNTQP-PENEANWLPAP-KGPFTLVLRLYWP---KPDALNGTWQAP . : : * :.::****:* * : : :*** * .. : * * .* MAB_3998|M.abscessus_ATCC_1997 AVQQVP TH_3203|M.thermoresistible__bu PVQILQ MMAR_2611|M.marinum_M PVRKA- MUL_3150|M.ulcerans_Agy99 PVRKA- Mflv_3051|M.gilvum_PYR-GCK APEKV- Mvan_3476|M.vanbaalenii_PYR-1 QPERV- MSMEG_4187|M.smegmatis_MC2_155 KPEKI- .