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M. smegmatis MC2 155 MSMEG_3598 (-)

NITSKIGAIAAAGAVGLGLTACGAGDTAANSDTKRIGVTVYDMSSFITEGKEGMDTYAKANNIELVWNSA
NNDVSTQASQVDSLINQGVDAIIVVPVQADSLGPQVASAKSKGIPLLAVNAALETPDLAGNVQPDDVAAG
AQEMQMMADRLGGKGNIVILQGPLGGSGEINRGKGIDQVLAKYPDIKVLAKDTANWKRDEAVNKMKNWIS
SFGPQIDGVVAQNDDMGLGALQALKEAGRTGVPIVGIDGIEDGLNAVKSGDFIGTSLQNGTVELSAGLAV
ADALVKGEDVKTDPVYVMPAITKDNVDVAIEHVVTERQKFLDGLVELTQQNLKTGDIAYEGIPGQTQP*

Operon Prediction Model: Genebank

Paralogs

species	id	gene	e-value	identity (len)	annotation
M. smegmatis MC2 155	MSMEG_3598	-	-	100% (349)	periplasmic sugar-binding proteins
M. smegmatis MC2 155	MSMEG_3599	-	e-170	85.96% (349)	sugar-binding transcriptional regulator, LacI family protein
M. smegmatis MC2 155	MSMEG_3095	-	8e-30	29.82% (285)	D-ribose-binding periplasmic protein

Closest Orthologs (e-value cutoff: 1e-4)

species	id	gene	e-value	identity (len)	annotation
M. bovis AF2122 / 97	-	-	-	-	-
M. gilvum PYR-GCK	Mflv_2605	-	5e-12	26.28% (274)	periplasmic binding protein/LacI transcriptional regulator
M. tuberculosis H37Rv	-	-	-	-	-
M. leprae Br4923	MLBr_00398	-	2e-09	25.20% (254)	putative D-ribose-binding protein
M. abscessus ATCC 19977	-	-	-	-	-
M. marinum M	-	-	-	-	-
M. avium 104	-	-	-	-	-
M. thermoresistible (build 8)	-	-	-	-	-
M. ulcerans Agy99	-	-	-	-	-
M. vanbaalenii PYR-1	Mvan_5293	-	1e-21	25.68% (331)	solute-binding protein

CLUSTAL 2.0.9 multiple sequence alignment


MSMEG_3598|M.smegmatis_MC2_155      MNITSKIGAIAAAGAVGLGLTAC----------GAGDTAANSDTK--RIG
Mvan_5293|M.vanbaalenii_PYR-1       MKRTSSLLFTAVVG-VGLTLTAC----------GSNSDSGSTEARSGKVG
Mflv_2605|M.gilvum_PYR-GCK          -MTFKRLAAIAGAGVLAFGVVSCSSTGGAPRESGEGGGGGTVDTPRMTIA
MLBr_00398|M.leprae_Br4923          MSTGTSVPLRVASIMLILGLLPA----------ILPACGFSESHHKLTIG
                                        . :   .    : : : ..               . . .     :.

MSMEG_3598|M.smegmatis_MC2_155      VTVYDMSS---FITEGKEGMDTYAKANNIELVWNSANNDVSTQASQVDSL
Mvan_5293|M.vanbaalenii_PYR-1       VILPDTKSSVRWETKDRPALAAAFQNAGVDYTIQNAEGSADTMATIADGM
Mflv_2605|M.gilvum_PYR-GCK          MITHEVPGD-SFWDLVRKGAEAAAQKDNVELRYSNDP-EAPNQANLVQAA
MLBr_00398|M.leprae_Br4923          VSYPTANSP--FWNAYTRFIDEGSHQLGVYINAVSAEEDEQKQLSDVETL
                                    :      .   :            :  .:     .   .  .  . .:  

MSMEG_3598|M.smegmatis_MC2_155      INQGVDAIIVVPVQADSLGPQVASAKSKGIPLLAVN---AALETPDLAGN
Mvan_5293|M.vanbaalenii_PYR-1       IADGVTVLAIVNLDSDSGASIQQKAASQGVKTIDYD---RLTLGGSADVY
Mflv_2605|M.gilvum_PYR-GCK          IDSNVDGIAVTLAKPDAMQAAVKAAEAKGIPVVAFN---AGMDSWKAMG-
MLBr_00398|M.leprae_Br4923          INQGIDGLIVTPQSTSIAPTLLRIATQANIPVVVVDRYPGYAPGQNKNAD
                                    * ..:  : :.  ...   .    *   .:  :  :         .    

MSMEG_3598|M.smegmatis_MC2_155      VQPDDVAAGAQEMQMMADRLGGK-GNIVILQGPLGGSGEINRGKGIDQVL
Mvan_5293|M.vanbaalenii_PYR-1       VSFDNNVVGELQGQGLVDCLGGRPANVVFLNGSPTDNNATLFSSGAHSVV
Mflv_2605|M.gilvum_PYR-GCK          VKEYFGQDGRIAGQGVGDRLRAEGATKAVCIVQ--EQGHVDLEARCAGVR
MLBr_00398|M.leprae_Br4923          YVAFLGPNNEKAGSGIAEALMAGGGSKFLALGGMPGNSVAQGRKAGLESA
                                            .    . : : * .  ..  .       ..            

MSMEG_3598|M.smegmatis_MC2_155      AKYPDIKVLAKDTA-NWKRDEAVNKMKNWISSFGPQIDGVVAQNDDMGLG
Mvan_5293|M.vanbaalenii_PYR-1       DATPSITIVGEQAVPDWDNDKAVTIFEQLYTAADGRVDGVYAANDGLAGS
Mflv_2605|M.gilvum_PYR-GCK          ETFPATEVLNVNGK----DMPSVESTITAKLQQDPSIDYLVALGAPFALT
MLBr_00398|M.leprae_Br4923          LTAVGHRLVQFQYAGDSEDKGLAAAENMLQAHPAGDANAIWCFNDKLCQG
                                           ::  :          .              : : . .  :   

MSMEG_3598|M.smegmatis_MC2_155      ALQALKEAGRTG-VPIVGIDGIEDGLNAVKSGDFIGTSLQNGTVELSAGL
Mvan_5293|M.vanbaalenii_PYR-1       VISILEKNKRAGQVPVTGQDATVEGLQNILAGTQCMTVYKSATEEANALA
Mflv_2605|M.gilvum_PYR-GCK          AVQSAKNAGSTA--KIGTFDTNAALVSAIQAG------------DVQWAV
MLBr_00398|M.leprae_Br4923          AIKAVYNANREKEFIFGGMDLTPQAIAAIENG-LYTVSLGAHWLEGGFGL
                                    .:.   :        .   *     :  :  *            :     

MSMEG_3598|M.smegmatis_MC2_155      AVADALVKGEDVKTDPVYVMPAITKDNVDVAIEHVVTERQKFLDGLVELT
Mvan_5293|M.vanbaalenii_PYR-1       EVAIALANGEQPQTTSTSRDDTGGRDVPSVLLTPKSITKDNINVVFDDGG
Mflv_2605|M.gilvum_PYR-GCK          DQQPYLQGYLAVDSLWLYLSNGNVIGGGQPTLTGPAFIDQSNIDAVAEYA
MLBr_00398|M.leprae_Br4923          AILYRKIHGQDP------AERMVKLDLLKVDKSNVAKFKARYIDNTPHYN
                                                             .  .                  .  

MSMEG_3598|M.smegmatis_MC2_155      QQNLKTGDIAYEGIPGQTQP
Mvan_5293|M.vanbaalenii_PYR-1       QSKDEVCSGQFAEACSAAGV
Mflv_2605|M.gilvum_PYR-GCK          KAGTR---------------
MLBr_00398|M.leprae_Br4923          WKSTTPFDMTITLN------