For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VAVSTNRLSSAITARPVVATAVGAIGISSSGLFVALSATSPGTASFYRCLFALRLLAPLAVAEWRGGGSP TAAQHGWPALAGVLFAADALLWTQAIYEVGVGLSAVLVNTQVVMVPLLARLIDHESLSARFVVLLPVVVL GTVLAGGVLESGLVGTAPVAGTAHSVLAALCYSIFLFLLRRGGPDRPLVQSYVTIMVSAAGAAVVGGVLW NGVTLSPGWDAAGWLMLTAINGQVLGWLLIALGSPSLRVEIGSAVLLLTPVAALVLGAVFLAQQPSLLQI IGSAMILACAYLVTTGRASR
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_3305 | - | - | 100% (300) | hypothetical protein MSMEG_3305 |
| M. smegmatis MC2 155 | MSMEG_3276 | - | 1e-04 | 23.40% (282) | integral membrane protein |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | - | - | - | - | - |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_4903 | - | 4e-06 | 21.69% (295) | hypothetical protein MMAR_4903 |
| M. avium 104 | - | - | - | - | - |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_0503 | - | 3e-06 | 21.69% (295) | hypothetical protein MUL_0503 |
| M. vanbaalenii PYR-1 | Mvan_1442 | - | 2e-05 | 21.05% (304) | hypothetical protein Mvan_1442 |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_4903|M.marinum_M --------------MPALAMGVTVTL-WAFAFVGVRSAGRVFSPGVLALS
MUL_0503|M.ulcerans_Agy99 -MASSTTSSQRTVNMPALAMGVTVTL-WAFAFVGVRSAGRVFSPGVLALS
Mvan_1442|M.vanbaalenii_PYR-1 MAALDTSRQARADQTHLFRTGLLFAIGSAFAFGSSGPFAKSLMEAGWTPT
MSMEG_3305|M.smegmatis_MC2_155 ----------MAVSTNRLSSAITARPVVATAVGAIG-ISSSGLFVALSAT
: .: * *. . . : :
MMAR_4903|M.marinum_M RLFIAVMVMAVIATIAATYTAYAGRATTRRLRPPSAAALTLVIAYGVAWF
MUL_0503|M.ulcerans_Agy99 RLFIAVMVMAVIATIAATYTAYAGRATTRRLRPPSAAALTLVIAYGVAWF
Mvan_1442|M.vanbaalenii_PYR-1 AAVTARLAGGALAMAVFATITYPGWLREARRHARTVALYGLVPIAGAQLF
MSMEG_3305|M.smegmatis_MC2_155 SPGTASFYRCLFALRLLAPLAVAEWRGGG---SPTAAQHGWPALAG-VLF
* : :* : : . . :.* * *
MMAR_4903|M.marinum_M GAYSIVISWAEQHIDAGTTALLVNLAPILVAVFAGFFLGEGYSARLLTGI
MUL_0503|M.ulcerans_Agy99 GAYSIVISWAEQHIDAGTTALLVNLAPILVAVFAGFFLGEGYSARLLTGI
Mvan_1442|M.vanbaalenii_PYR-1 YFN------AVSHLSVGVALLLEYTAPILVVGWLWATTRRRPTTMTLAGV
MSMEG_3305|M.smegmatis_MC2_155 AADALLWTQAIYEVGVGLSAVLVNTQVVMVPLLARLIDHESLSARFVVLL
* .:..* : :* ::* . :: :. :
MMAR_4903|M.marinum_M AIAFAGVVLIS-----AGGGGSQTDWLGVGLGLLAAVLYAAGVLLQKVAL
MUL_0503|M.ulcerans_Agy99 AIAFAGVVLIS-----AGGGGSQTDWLGVGLGLLAAVLYAAGVLLQKVAL
Mvan_1442|M.vanbaalenii_PYR-1 SLAVAGIMLVLGIVGPGGLAGAHINLTGVGWGLAAAVCAACYFLMSDKAG
MSMEG_3305|M.smegmatis_MC2_155 PVVVLGTVLAGG-VLESGLVG-TAPVAGTAHSVLAALCYSIFLFLLRRGG
.:.. * :* .* * *.. .: **: : .:: .
MMAR_4903|M.marinum_M RTVDALSATLWGTLVGFIVTLPFLPAAARELSLASAADLWWLVFLGAGPS
MUL_0503|M.ulcerans_Agy99 RTVDALSATLWGTLVGFIVTLPFLPAAARELSLASAADLWWLVFLGAGPS
Mvan_1442|M.vanbaalenii_PYR-1 ----AESTGDQGPLHPITLAAGGLIVGAATVAALGATGVMPLTFTAN---
MSMEG_3305|M.smegmatis_MC2_155 ------------PDRPLVQSYVTIMVSAAGAAVVGGVLWNGVTLSPG---
. : : : ..* : ... :.:
MMAR_4903|M.marinum_M AIAFTTWAYALARTNAGVTAATTLMVPALVIALSGLLLAEVPNPLGLAGG
MUL_0503|M.ulcerans_Agy99 AIAFTTWAYALARTNAGVTAATTLMVPALVIALSGLLLAEVPNPLGLAGG
Mvan_1442|M.vanbaalenii_PYR-1 DTVIAGWTTSWIVPVVALALIPTAIAYTLGIVGVARLRPRFASLVGLS--
MSMEG_3305|M.smegmatis_MC2_155 ------WDAAGWLMLTAIN--GQVLGWLLIALGSPSLRVEIGSAVLLL--
* : ..: : * * .. . : *
MMAR_4903|M.marinum_M GACLIGVALARGLLRLPARSRRRTGTGDQLQGVESLPVG---LSDYAASS
MUL_0503|M.ulcerans_Agy99 GACLIGVVLARGLLRLPARSRRRTGTGDQLQGVESLPVG---LSDYAASS
Mvan_1442|M.vanbaalenii_PYR-1 -EVMFAVLAAWVLLGEAMTVTQAVGGAVVLAGLALARQGDRSELDEAGTV
MSMEG_3305|M.smegmatis_MC2_155 -TPVAALVLGAVFLAQQPSLLQIIGSAMILACAYLVTTG------RASR-
: .: . :* : * . * * *.
MMAR_4903|M.marinum_M TAPSGRQL
MUL_0503|M.ulcerans_Agy99 TAPSGRQL
Mvan_1442|M.vanbaalenii_PYR-1 TWPDAPAP
MSMEG_3305|M.smegmatis_MC2_155 --------