For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_3209 (-)

annotation: 1-(5-phosphoribosyl)-5-
coordinates: 3287922 - 3288698
length: 258

VATGATEAAGAGKRGLILLPAVDVVNGQAVRLVQGKAGSETDYGSAIEAAEAWQRDGAEWIHLVDLDAAF
GRGSNRELLAEVVGKLDVAVELSGGIRDDESLRAALDTGCARVNIGTAALENPQWCARAIAEHGDRVAVG
LDAQTDGAGGFRLRGRGWETDGGDLWEVLDRLDSEGCSRYVVTDVSKDGTLTGPNLDLLAAVAGRTDAPV
IASGGVSSLDDLRAIATLTGVGVEGAIVGKALYAGRFTLPQALSAVSG
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_3209--100% (258)1-(5-phosphoribosyl)-5-
M. smegmatis MC2 155MSMEG_3211hisF1e-1724.50% (249) imidazole glycerol phosphate synthase subunit HisF

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb1629hisA1e-11485.48% (241) phosphoribosyl isomerase A
M. gilvum PYR-GCKMflv_3609-1e-11383.82% (241) 1-(5-phosphoribosyl)-5-
M. tuberculosis H37RvRv1603hisA1e-11485.48% (241) phosphoribosyl isomerase A
M. leprae Br4923MLBr_01261hisA1e-10879.25% (241) phosphoribosyl isomerase A
M. abscessus ATCC 19977MAB_2666c-1e-10880.58% (242) phosphoribosyl isomerase A
M. marinum MMMAR_2399hisA1e-11787.97% (241) phosphoribosylformimino-5-aminoimidazole carboxamide
M. avium 104MAV_3183-1e-11787.19% (242) 1-(5-phosphoribosyl)-5-
M. thermoresistible (build 8)TH_1159hisA1e-11181.97% (244) PROBABLE PHOSPHORIBOSYLFORMIMINO-5-AMINOIMIDAZOLE
M. ulcerans Agy99MUL_1576hisA1e-11888.38% (241) phosphoribosyl isomerase A
M. vanbaalenii PYR-1Mvan_2808-1e-11384.65% (241) 1-(5-phosphoribosyl)-5-

CLUSTAL 2.0.9 multiple sequence alignment


MMAR_2399|M.marinum_M               --------MKEETVPLILLPAVDVVEGRAVRLVQGKAGSETEYGSALDAA
MUL_1576|M.ulcerans_Agy99           -------------MPLILLPAVDVVEGRAVRLVQGKAGSETEYGSALDAA
Mb1629|M.bovis_AF2122/97            ------------MMPLILLPAVDVVEGRAVRLVQGKAGSQTEYGSAVDAA
Rv1603|M.tuberculosis_H37Rv         ------------MMPLILLPAVDVVEGRAVRLVQGKAGSQTEYGSAVDAA
MLBr_01261|M.leprae_Br4923          ------------MMSLILLPAVDVVEGRAVRLVQGKAGSENDYGSALDAA
MAV_3183|M.avium_104                --------------MLILLPAVDVVDGRAVRLVQGKAGSETEYGSALDAA
Mflv_3609|M.gilvum_PYR-GCK          -----MNASS----KLILLPAVDVVEGRAVRLVQGQAGSETEYGSALDAA
Mvan_2808|M.vanbaalenii_PYR-1       --MTSVNPSSSKPSALILLPAVDVVEGRAVRLVQGQAGSETEYGSALDAA
TH_1159|M.thermoresistible__bu      -------------VSLILLPAVDVVDGKAVRLVQGQAGSETEYGSALDAA
MSMEG_3209|M.smegmatis_MC2_155      MATGATEAAGAGKRGLILLPAVDVVNGQAVRLVQGKAGSETDYGSAIEAA
MAB_2666c|M.abscessus_ATCC_199      -------------MSLVLLPAVDVADGQAVRLVQGKAGSETTYGSPRDAA
                                                   *:*******.:*:*******:***:. ***. :**

MMAR_2399|M.marinum_M               LGWQRDGAEWIHLVDLDAAFGRGSNRELLAEVVGKLDVAVELSGGIRDDD
MUL_1576|M.ulcerans_Agy99           LGWQRDGAEWIHLVDLDAAFGRGSNRELLAEVVGKLDVAVELSGGIRDDD
Mb1629|M.bovis_AF2122/97            LGWQRDGAEWIHLVDLDAAFGRGSNHELLAEVVGKLDVQVELSGGIRDDE
Rv1603|M.tuberculosis_H37Rv         LGWQRDGAEWIHLVDLDAAFGRGSNHELLAEVVGKLDVQVELSGGIRDDE
MLBr_01261|M.leprae_Br4923          LCWQRDGADWIHLVDLDAAFGRGSNRELLSEMVGKLDVQVELSGGIRDDD
MAV_3183|M.avium_104                LGWQRDGAEWIHLVDLDAAFGRGSNRELLAEVVGKLDVQVELSGGIRDDD
Mflv_3609|M.gilvum_PYR-GCK          MQWQSDGAEWIHLVDLDAAFGRGSNRELLADVVGRLDVAVELSGGIRDDE
Mvan_2808|M.vanbaalenii_PYR-1       MTWQRDGAEWIHLVDLDAAFGRGSNRELLAEVVGKLDVAVELSGGIRDDD
TH_1159|M.thermoresistible__bu      LGWQRDGAEWIHLVDLDAAFGRGSNRELIAEVVGRLDVAVELSGGIRDHE
MSMEG_3209|M.smegmatis_MC2_155      EAWQRDGAEWIHLVDLDAAFGRGSNRELLAEVVGKLDVAVELSGGIRDDE
MAB_2666c|M.abscessus_ATCC_199      LAWQNDGAEWVHLVDLDAAFGRGSNRELLAQVVGELDVKVELSGGIRDDE
                                      ** ***:*:**************:**::::**.*** *********.:

MMAR_2399|M.marinum_M               SLAAALATGCARVNLGTAALENPQWCARMIAEHGEKVAVGLDVQIV----
MUL_1576|M.ulcerans_Agy99           SLAAALATGCARVNLGTAALENPQWCARMIAEHGEKVAVGLDVQIV----
Mb1629|M.bovis_AF2122/97            SLAAALATGCARVNVGTAALENPQWCARVIGEHGDQVAVGLDVQII----
Rv1603|M.tuberculosis_H37Rv         SLAAALATGCARVNVGTAALENPQWCARVIGEHGDQVAVGLDVQII----
MLBr_01261|M.leprae_Br4923          SLNAALATGCARVNLGTAACENPHWCAQVIAEHGDKIAVGLDVQIV----
MAV_3183|M.avium_104                SLAAALATGCARVNLGTAALENPQWCARAIGEHGDKVAVGLDVQTI----
Mflv_3609|M.gilvum_PYR-GCK          SLAAALATGCARVNLGTAALENPQWCAKVVAEHGEKVAVGLDVKIE----
Mvan_2808|M.vanbaalenii_PYR-1       SLAAALATGCARVNLGTAALENPQWCAKVVAEHGDKVAVGLDVKIV----
TH_1159|M.thermoresistible__bu      SLQAALATGCARVNLGTAALEDPQWCAEVIAEHGDKVAVGLDVKIDPSHP
MSMEG_3209|M.smegmatis_MC2_155      SLRAALDTGCARVNIGTAALENPQWCARAIAEHGDRVAVGLDAQTDG---
MAB_2666c|M.abscessus_ATCC_199      ALTAALATGCARVNLGTAALEDPEWCASAIARHGERVAVGLDVEIV----
                                    :* *** *******:**** *:*.***  :..**:::*****.:      

MMAR_2399|M.marinum_M               DGKHRLRGRGWETDGGDLWEVLQRLDSEGCSRYVVTDVTKDGTLAGPNLE
MUL_1576|M.ulcerans_Agy99           GGKHRLRGRGWETDGGDLWEVLQRLDSEGCSRYVVTDVTKDGTLAGPNLE
Mb1629|M.bovis_AF2122/97            DGEHRLRGRGWETDGGDLWDVLERLDSEGCSRFVVTDITKDGTLGGPNLD
Rv1603|M.tuberculosis_H37Rv         DGEHRLRGRGWETDGGDLWDVLERLDSEGCSRFVVTDITKDGTLGGPNLD
MLBr_01261|M.leprae_Br4923          DGQHRLRGRGWETDGGDLWDVLENLDRQGCSRFIVTDVTKDGTLDGPNLD
MAV_3183|M.avium_104                DGQHRLRGRGWETDGGDLWEVLERLERQGCSRYVVTDVTKDGTLGGPNLD
Mflv_3609|M.gilvum_PYR-GCK          DGQYRLRGRGWETDGGDLWTVLERLDGEGCSRFVVTDVTKDGTLNGPNLD
Mvan_2808|M.vanbaalenii_PYR-1       DGQHRLRGRGWETDGGDLWTVLDRLDGEGCSRFVVTDVTKDGTLNGPNLE
TH_1159|M.thermoresistible__bu      ESRHRLRGRGWESDGGDLWEVLERLNREGCSRYVVTDVTKDGTLKGPNLE
MSMEG_3209|M.smegmatis_MC2_155      AGGFRLRGRGWETDGGDLWEVLDRLDSEGCSRYVVTDVSKDGTLTGPNLD
MAB_2666c|M.abscessus_ATCC_199      EGAHRLRGRGWVSDGGDLWEVLERLRAQGCSRYVVTDVTKDGTLTGPNLE
                                     . .******* :****** **:.*  :****::***::***** ****:

MMAR_2399|M.marinum_M               LLAGVAGRTEAPVIASGGVSSLDDLRAIATLTGQGVEGAIVGKALYAGRF
MUL_1576|M.ulcerans_Agy99           LLAGVAGRTEAPVIASGGVSSLDDLRAIATLTGQGVEGAIVGKALYAGRF
Mb1629|M.bovis_AF2122/97            LLAGVADRTDAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKALYARRF
Rv1603|M.tuberculosis_H37Rv         LLAGVADRTDAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKALYARRF
MLBr_01261|M.leprae_Br4923          LLASVSDRTNVPVIASGGVSSLDDLRAIAKFTERGIEGAIVGKALYAERF
MAV_3183|M.avium_104                LLGAVADRTDAPVIASGGVSSLDDLRAIATLTGRGVEGAIVGKALYAGRF
Mflv_3609|M.gilvum_PYR-GCK          LLAQVCERTDAPVIASGGVSSLDDLRAIATLTDRGVEGAIVGKALYAGRF
Mvan_2808|M.vanbaalenii_PYR-1       LLTQVCERTDAPVIASGGVSSLDDLRAIATLTDRGVEGAIVGKALYAGRF
TH_1159|M.thermoresistible__bu      LLKAVCDRTDAPVIASGGVSSLDDLRAIAALTDRGVEGAIVGKALYAGRF
MSMEG_3209|M.smegmatis_MC2_155      LLAAVAGRTDAPVIASGGVSSLDDLRAIATLTGVGVEGAIVGKALYAGRF
MAB_2666c|M.abscessus_ATCC_199      LLAQVAGVANAPVIASGGVSSLDDLRAIAELTGAGVEGAIVGKALYAGRF
                                    **  *.  ::.****************** :*  *:*********** **

MMAR_2399|M.marinum_M               TLPQALTAVRE
MUL_1576|M.ulcerans_Agy99           TLPQALTAVRE
Mb1629|M.bovis_AF2122/97            TLPQALAAVRD
Rv1603|M.tuberculosis_H37Rv         TLPQALAAVRD
MLBr_01261|M.leprae_Br4923          TLPQALAVVRM
MAV_3183|M.avium_104                TLPQALAAVAE
Mflv_3609|M.gilvum_PYR-GCK          TLPQALDAVRT
Mvan_2808|M.vanbaalenii_PYR-1       TLPQALDAVGP
TH_1159|M.thermoresistible__bu      TLPEALAAVRQ
MSMEG_3209|M.smegmatis_MC2_155      TLPQALSAVSG
MAB_2666c|M.abscessus_ATCC_199      TLPDAIAAVS-
                                    ***:*: .*