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M. smegmatis MC2 155 MSMEG_3123 (sufD)

annotation: FeS assembly protein SufD
coordinates: 3198660 - 3199871
length: 403

MASQLTQASEGSAKSGSVLNLNKGEVFTSFDVNAFEVPHGRDEIWRFTPLRRLRGLHNGTAGADGKATGS
ALIEVSERPGVTIETVERGDERLGQGGVPADRVAAQAFSSFSNATVVTVGRNVQVDEPVEITITGPGEGN
TAYGHVQVRVEELGEAVVVIDHRGSGTYADNIEFVVGDAATLKVVSIADWADDTVHVSTHHATLGKDAVL
RHFAVTLGGDVARLTGRVRFAAPGGDAELLGLYFADDGQHFESRLLVDHAQPHCRSHVTYKGALQGDPAS
DKPDTHTVWVGDVLIRAEATGTDTYEVNRNLVLTDGARADSVPNLEIETGEIVGAGHASATGRFDDEQLF
YLRARGIPEDQARRLVVRGFFGELIQKIAVPAVRDRLTAAIEHELELTEGIKH
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_3123sufD-100% (403)FeS assembly protein SufD
M. smegmatis MC2 155MSMEG_3122sufB2e-1521.50% (307) FeS assembly protein SufB

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb1497-1e-17878.64% (398) hypothetical protein Mb1497
M. gilvum PYR-GCKMflv_3676-1e-17575.94% (399) FeS assembly protein SufD
M. tuberculosis H37RvRv1462-1e-17778.39% (398) hypothetical protein Rv1462
M. leprae Br4923MLBr_00594-1e-16573.45% (388) hypothetical protein MLBr_00594
M. abscessus ATCC 19977MAB_2748c-1e-16872.54% (397) hypothetical protein MAB_2748c
M. marinum MMMAR_2267-1e-17980.21% (379) hypothetical protein MMAR_2267
M. avium 104MAV_3317sufD1e-17776.32% (397) FeS assembly protein SufD
M. thermoresistible (build 8)TH_1610-1e-12183.00% (253) CONSERVED HYPOTHETICAL PROTEIN
M. ulcerans Agy99MUL_1863-1e-17979.95% (379) hypothetical protein MUL_1863
M. vanbaalenii PYR-1Mvan_2734-0.078.50% (400) FeS assembly protein SufD

CLUSTAL 2.0.9 multiple sequence alignment


MSMEG_3123|M.smegmatis_MC2_155      -MASQLTQASEGSAKSG---SVLNLNKGEVFTSFDVNAFEVPHGRDEIWR
TH_1610|M.thermoresistible__bu      --------------------------------------------------
Mflv_3676|M.gilvum_PYR-GCK          -MSRDLTSAVEGSVKSG---SVLNLNKGELFSSFDVNAFEVPGGRDELWR
Mvan_2734|M.vanbaalenii_PYR-1       -MASQLTQASEGTAKSG---SVLNLNKGELFSSFDVSAFEVPGGRDEIWR
Mb1497|M.bovis_AF2122/97            MTAPGLTAAVEG----------IAHNKGELFASFDVDAFEVPHGRDEIWR
Rv1462|M.tuberculosis_H37Rv         MTAPGLTAAVEG----------IAHNKGELFASFDVDAFEVPHGRDEIWR
MMAR_2267|M.marinum_M               MTVDNLTTAAA-------------LNKGELFASFDVDAFEVPHGRDELWR
MUL_1863|M.ulcerans_Agy99           MTVDNLTTAAA-------------LNKGELFASFDVDAFEVPHGRDELWR
MAV_3317|M.avium_104                --MTNLTEAVEGSS-------LAAANKGELFASFDVDAFEVPHGRDEIWR
MLBr_00594|M.leprae_Br4923          ------MTAVEGSS-------LTALNKGRLFASFDVDAFEVPGGRDEIWR
MAB_2748c|M.abscessus_ATCC_199      --MSNLTDSTPGGSNLAGAVEGTGINKGELFSSYDVDAFEVPGGRDELWR
                                                                                      

MSMEG_3123|M.smegmatis_MC2_155      FTPLRRLRGLHNGTAGADGKATGSALIEVSERPGVTIETVERGDERLGQG
TH_1610|M.thermoresistible__bu      --------------------------------------------------
Mflv_3676|M.gilvum_PYR-GCK          FTPLKRLRGLHDGSATPSGTAG----ITVTEREGVTVETVARGDARLGQA
Mvan_2734|M.vanbaalenii_PYR-1       FTPLKRLRGLHDGSAPATGTAT----IEVTTPDDVWVDKTTRDDGRLGQA
Mb1497|M.bovis_AF2122/97            FTPLRRLRGLHDGSARATGSAT----ITVSERPGVYTQTVRRGDPRLGEG
Rv1462|M.tuberculosis_H37Rv         FTPLRRLRGLHDGSARATGSAT----ITVSERPGVYTQTVRRGDPRLGEG
MMAR_2267|M.marinum_M               FTPLKRLRGLHDGSAAASGSAQ----LTVGEQAGLRVETVRRGDERLGQG
MUL_1863|M.ulcerans_Agy99           FTPLKRLRGLHDGSAAASGSAQ----LTVGEQAGLRVETVRRGDERLGQG
MAV_3317|M.avium_104                FTPLRRLRGLHDGSAPATGKAE----VSVGEQPGLRVQTVRRGDERLGQG
MLBr_00594|M.leprae_Br4923          FTPLRRLRGLHDGSAVANGKVH----IRVSQQSGVQTEIVGRGDGRLGQG
MAB_2748c|M.abscessus_ATCC_199      FTPLRRLRGLHDGTAVATAAAP----VAVNASGGVTVETVERSDDRLGQG
                                                                                      

MSMEG_3123|M.smegmatis_MC2_155      GVPADRVAAQAFSSFSNATVVTVGRNVQVDEPVEITITGPGEGNTAYGHV
TH_1610|M.thermoresistible__bu      --------------------------------------------------
Mflv_3676|M.gilvum_PYR-GCK          GVPSDRVAAQAFSSFESATVVTVARDTEVAEPIEIVIEGPGEYAVAYGHL
Mvan_2734|M.vanbaalenii_PYR-1       GAPADRVAAQAYSSFESATLIEIPNQAVIRDPIEVRITGPGEGATAYGHL
Mb1497|M.bovis_AF2122/97            GVPTDRVAAQAFSSFNSATLVTVERDTQVVEPVGITVTGPGEGAVAYGHL
Rv1462|M.tuberculosis_H37Rv         GVPTDRVAAQAFSSFNSATLVTVERDTQVVEPVGITVTGPGEGAVAYGHL
MMAR_2267|M.marinum_M               GVPADRVAAQAFSSFNSATLVTVGRDTQLGEPVNITITGPGEGAVAYGHL
MUL_1863|M.ulcerans_Agy99           GVPADRVAAQAFSSFNSATLVTVGRDTQLGEPVNITITGPGKGAVAYGHL
MAV_3317|M.avium_104                GIPTDRVAAQAFSSFNSATLITVQRDTQIAEPIGVTVTGPGEGAVAYGHL
MLBr_00594|M.leprae_Br4923          GIPTDRVAAQAFSSFQSATVVTVGRDMQIATPINIAVTGPDKGAVVYGHL
MAB_2748c|M.abscessus_ATCC_199      GIPSDRVAAQAYSSFSTATVVSVGKQQVVADPIEISLSGPGQGQVAYGHT
                                                                                      

MSMEG_3123|M.smegmatis_MC2_155      QVRVEELGEAVVVIDHRGSGTYADNIEFVVGDAATLKVVSIADWADDTVH
TH_1610|M.thermoresistible__bu      -VRVEQLADAVVVIDQRGSGVYADNIEFVVGDGATLKVVSIADWAGDAVN
Mflv_3676|M.gilvum_PYR-GCK          QIRVEELSRAIVVVDLRGSGVYADNVEIIVGDSAGLGLIWIADWADDTVH
Mvan_2734|M.vanbaalenii_PYR-1       QIRVGELAEAVVVIDHRGSGTYADNIEFVVGDGATLRVVSIADWADDVVH
Mb1497|M.bovis_AF2122/97            QVRIEELGEAVVVIDHRGGGTYADNVEFVVDDAARLTAVWIADWADDTVH
Rv1462|M.tuberculosis_H37Rv         QVRIEELGEAVVVIDHRGGGTYADNVEFVVDDAARLTAVWIADWADNTVH
MMAR_2267|M.marinum_M               QIRVEELGEAVVVVDHRGSGTYADNVEFVVGDCARLTVVWIADWADDTVH
MUL_1863|M.ulcerans_Agy99           QIRVEELGEAVVVVDHRGSGTYADNVEFVVGDCARLTVVWIADWADDTVH
MAV_3317|M.avium_104                QIRVEELAEAVVVIDHRGSGTLADNVEFVVDDAARLTVVWLADWADDAVH
MLBr_00594|M.leprae_Br4923          QIRVCKFGEAVVVIDHRGSGTYADNVEFIVEAAARLTVVWIADWADDMVH
MAB_2748c|M.abscessus_ATCC_199      QVRAGALSESAVVIDYRGSGTYAENVEFVLDDAARLTVVSIADWADDAVH
                                     :*   :. : **:* **.*. *:*:*:::   * *  : :****.: *:

MSMEG_3123|M.smegmatis_MC2_155      VSTHHATLGKDAVLRHFAVTLGGDVARLTGRVRFAAPGGDAELLGLYFAD
TH_1610|M.thermoresistible__bu      VSMHHAALGKDAVLRHAAVLLGGEVVRMTGRVRFNAPGGDAELYGLYFAD
Mflv_3676|M.gilvum_PYR-GCK          VSSHHAKLGRDAVLGHVNVTLGGDVVRTTATVRYTGPGGEAKMLGTYFAD
Mvan_2734|M.vanbaalenii_PYR-1       VTMHHALLGRDAVLRHAAVTLGGSVVRMTGRVRYTAPGGDAELLGLYYAD
Mb1497|M.bovis_AF2122/97            LSAHHARIGKDAVLRHVTVMLGGDVVRMSAGVRFCGAGGDAELLGLYFAD
Rv1462|M.tuberculosis_H37Rv         LSAHHARIGKDAVLRHVTVMLGGDVVRMSAGVRFCGAGGDAELLGLYFAD
MMAR_2267|M.marinum_M               LSAHHAKLGKDAVLRHVTVTLGGEVVRMSANVRFTAPGGDADLLGLYFAD
MUL_1863|M.ulcerans_Agy99           LSAHHAKLGKDAVLRHVTVTLGGEVVRMSANVRFTAPGGDADLLGLYFAD
MAV_3317|M.avium_104                VSMHHARLGKDAVLRHVAVTLGGEVVRLTANVRYTSTGGDAELLGLYFAD
MLBr_00594|M.leprae_Br4923          LSAHHALLGKDAVLRHITVTLGGEVVRVSANVRFSGPGGDAELLGLYFAD
MAB_2748c|M.abscessus_ATCC_199      VTTHHAKLGKDAVLRHIAVTLGGDVVRLTGTVRFGAPGGDAELLGLYYAD
                                    :: *** :*:**** *  * ***.*.* :. **: ..**:*.: * *:**

MSMEG_3123|M.smegmatis_MC2_155      DGQHFESRLLVDHAQPHCRSHVTYKGALQGDPASDKPDTHTVWVGDVLIR
TH_1610|M.thermoresistible__bu      DGQHLESRLLIDHAVPHCRSNVIYKGALQSDPDSKRPDAHAVWVGDVLIR
Mflv_3676|M.gilvum_PYR-GCK          DGQHFESRLLVDHSQPNCKSDVLYKGALQGDPDSRKPDAHTVWVGDVLIR
Mvan_2734|M.vanbaalenii_PYR-1       AGQHFESRLLVDHSQPNCKSDVKYKGALQGDPDSRKPDAHTVWVGDVLIR
Mb1497|M.bovis_AF2122/97            DGQHLESRLLVDHAHPDCKSNVLYKGALQGDPASSLPDAHTVWVGDVLIR
Rv1462|M.tuberculosis_H37Rv         DGQHLESRLLVDHAHPDCKSNVLYKGALQGDPASSLPDAHTVWVGDVLIR
MMAR_2267|M.marinum_M               DGQHLESRLLVDHAQPDCKSNVLYKGALQGDPGSALPDAHTVWVGDVLIR
MUL_1863|M.ulcerans_Agy99           DGQHLESRLLVDHAQPDCKSNVLYKGALQGDPGSALPDAHTVWVGDVLIR
MAV_3317|M.avium_104                DGQHLESRLLVDHAQPDCKSNVLYKGALQGDPASALPDAHTVWVGDVLIR
MLBr_00594|M.leprae_Br4923          DGQHLESRLLVDHAHPDCKSNVLYKGALQGDPVSSRPDAHTVWVGDVLIH
MAB_2748c|M.abscessus_ATCC_199      EGQFFEHRLLVDHAQPNCKSNVVYKGALQGDPSSDKPDAHTVWIGDVLIR
                                     **.:* ***:**: *.*:*.* ******.** *  **:*:**:*****:

MSMEG_3123|M.smegmatis_MC2_155      AEATGTDTYEVNRNLVLTDGARADSVPNLEIETGEIVGAGHASATGRFDD
TH_1610|M.thermoresistible__bu      AAATGTDTYEINRNLLLTDGARADSVPNLEIETGEIVGAGHASATGRFDD
Mflv_3676|M.gilvum_PYR-GCK          AEATGTDTFEVNRNLVLTDGARADSVPNLEIETGEIVGAGHASATGRFDD
Mvan_2734|M.vanbaalenii_PYR-1       AEATGTDTFEVNRNLVLTDGARADSVPNLEIETGEIVGAGHASATGRFDD
Mb1497|M.bovis_AF2122/97            AQATGTDTFEVNRNLVLTDGARADSVPNLEIETGEIVGAGHASATGRFDD
Rv1462|M.tuberculosis_H37Rv         AQATGTDTFEVNRNLVLTDGARADSVPNLEIETGEIVGAGHASATGRFDD
MMAR_2267|M.marinum_M               AAATGTDTFEVNRNLVLTDGARADSVPNLEIETGEIAGAGHASATGRFDD
MUL_1863|M.ulcerans_Agy99           AAATGTDTFEVNRNLVLTDGARADSVPNLEIETGEIAGAGHASATGRFDD
MAV_3317|M.avium_104                AEATGTDTFEVNRNLVLTDGARADSVPNLEIETGEIAGAGHASATGRFDD
MLBr_00594|M.leprae_Br4923          PEATGTDTFEVNRNLVLTNGVRADSVPNLEIETDEIVGAGHASATGRFDD
MAB_2748c|M.abscessus_ATCC_199      AEATGTDTFELNRNLILTDGARADSVPNLEIETGEIAGAGHASATGRFDD
                                    . ******:*:****:**:*.************.**.*************

MSMEG_3123|M.smegmatis_MC2_155      EQLFYLRARGIPEDQARRLVVRGFFGELIQKIAVPAVRDRLTAAIEHELE
TH_1610|M.thermoresistible__bu      EQVFYLQARGIPEDQARKLIVRGFFNEVIQKITVPEVRDRLTDAIEHELA
Mflv_3676|M.gilvum_PYR-GCK          EQLFYLRARGIPEAQARRLVVRGFFNEIIAKIAVPAVRERLTDAIERELA
Mvan_2734|M.vanbaalenii_PYR-1       EQLFYLRARGIPENQARRLVVRGFFNEIIAKIAVPAVRERLTEAIERELA
Mb1497|M.bovis_AF2122/97            EQLFYLRSRGIPEAQARRLVVRGFFGEIIAKIAVPEVRERLTAAIEHELE
Rv1462|M.tuberculosis_H37Rv         EQLFYLRSRGIPEAQARRLVVRGFFGEIIAKIAVPEVRERLTAAIEHELE
MMAR_2267|M.marinum_M               EQLFYLRSRGIPEEQARRLVIRGFFGEIISKIAVPEVRERLTGAIEHELE
MUL_1863|M.ulcerans_Agy99           EQLFYLRSRGIPEEQARRLVIRGFFGEIISKIAVPEVRERLTGAIEHELE
MAV_3317|M.avium_104                EQLFYLRSRGIPEEQARRLVIRGFFAEIISKIAVPEIRERLTAAIEHELA
MLBr_00594|M.leprae_Br4923          EQLFYLRSRGIGEEQARRLLVRGFFGEIISKIAVPQVRERLIAAIEHELT
MAB_2748c|M.abscessus_ATCC_199      EQLFYLRSRGIPEEDARRLVVRGFFQDIIGRIGIESVRDRLTEAIEQELQ
                                    **:***::*** * :**:*::**** ::* :* :  :*:**  ***:** 

MSMEG_3123|M.smegmatis_MC2_155      LTEG---------IKH
TH_1610|M.thermoresistible__bu      ITEG---------KLS
Mflv_3676|M.gilvum_PYR-GCK          ITEA---------SAN
Mvan_2734|M.vanbaalenii_PYR-1       LTEG---------NNQ
Mb1497|M.bovis_AF2122/97            ITES-----TEKTTVS
Rv1462|M.tuberculosis_H37Rv         ITES-----TEKTTVS
MMAR_2267|M.marinum_M               ITESQATEKTENTAAS
MUL_1863|M.ulcerans_Agy99           ITESQATEKTENTAAS
MAV_3317|M.avium_104                FTES-------RATAS
MLBr_00594|M.leprae_Br4923          ITES-------RSTAS
MAB_2748c|M.abscessus_ATCC_199      ANAN------------
                                     .