For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MASTADFKNGLVLQIDGQLWQIVEFQHVKPGKGPAFVRTKLKNVVSGKVVDKTYNAGVKVETATVDRRDA TYLYRDGSDFVFMDSEDFEQHPLPESLVGRLADFLLESMPVQIAFHDGTPLYLELPVSVELEVTHTEPGL QGDRSSAGTKPATVETGAEIQVPLFINTGDRLKVDTRDGSYLGRVNA
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_3035 | efp | - | 100% (187) | elongation factor P |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2563c | efp | 4e-93 | 85.56% (187) | elongation factor P |
M. gilvum PYR-GCK | Mflv_3752 | - | 1e-100 | 94.65% (187) | elongation factor P |
M. tuberculosis H37Rv | Rv2534c | efp | 4e-93 | 85.56% (187) | elongation factor P |
M. leprae Br4923 | MLBr_00522 | efp | 1e-91 | 84.95% (186) | elongation factor P |
M. abscessus ATCC 19977 | MAB_2837c | - | 4e-89 | 85.48% (186) | elongation factor P |
M. marinum M | MMAR_2181 | efp | 3e-95 | 88.24% (187) | elongation factor P Efp |
M. avium 104 | MAV_3411 | efp | 5e-98 | 91.44% (187) | elongation factor P |
M. thermoresistible (build 8) | TH_0105 | efp | 3e-96 | 91.35% (185) | PROBABLE ELONGATION FACTOR P EFP |
M. ulcerans Agy99 | MUL_1765 | efp | 3e-95 | 88.24% (187) | elongation factor P |
M. vanbaalenii PYR-1 | Mvan_2651 | - | 3e-99 | 93.58% (187) | elongation factor P |
CLUSTAL 2.0.9 multiple sequence alignment Mb2563c|M.bovis_AF2122/97 MATTADFKNGLVLVIDGQLWTITEFQHVKPGKGPAFVRTKLKNVLSGKVV Rv2534c|M.tuberculosis_H37Rv MATTADFKNGLVLVIDGQLWTITEFQHVKPGKGPAFVRTKLKNVLSGKVV MLBr_00522|M.leprae_Br4923 MATTADFKNGLVLVIDGQLWTIIGFQHVKPGKGPAFVRTKLKNVLSGKVV MMAR_2181|M.marinum_M MASTADFKNGLVLQIDGQLWSIVEFQHVKPGKGPAFVRTKLKNVLSGKVV MUL_1765|M.ulcerans_Agy99 MASTADFKNGLVLQIDGQLWSIVEFQHVKPGKGPAFVRTKLKNVLSGKVV MAB_2837c|M.abscessus_ATCC_199 MASTADFKNGLVLNIDGQLWQITEFQHVKPGKGPAFVRTKLKNVLSGKVV MAV_3411|M.avium_104 MASTADFKNGLVLVIDGQLWQIVEFQHVKPGKGPAFVRTKLKNVLSGKVV Mflv_3752|M.gilvum_PYR-GCK MASTADFKNGLVLQIDGQLWQIVEFQHVKPGKGPAFVRTKLKNVVSGKVV Mvan_2651|M.vanbaalenii_PYR-1 MASTADFKNGLVLQIDGQLWQIVEFQHVKPGKGPAFVRTKLKNVVSGKVV MSMEG_3035|M.smegmatis_MC2_155 MASTADFKNGLVLQIDGQLWQIVEFQHVKPGKGPAFVRTKLKNVVSGKVV TH_0105|M.thermoresistible__bu VATTADFKNGLVLVIDGQLWQIVEFLHVKPGKGPAFVRTKLKNVVSGKTV :*:********** ****** * * ******************:***.* Mb2563c|M.bovis_AF2122/97 DKTFNAGVKVDTATVDRRDTTYLYRDGSDFVFMDSQDYEQHPLPEALVGD Rv2534c|M.tuberculosis_H37Rv DKTFNAGVKVDTATVDRRDTTYLYRDGSDFVFMDSQDYEQHPLPEALVGD MLBr_00522|M.leprae_Br4923 DKTYNAGVKVDTATVDRRDTTYLYRDGANFVFMDSQDYEQHPLPESLVGD MMAR_2181|M.marinum_M DKTYNAGVKVETATVDRRDTTYLYRDGSDFVFMDSQDYEQHPLPESLVGD MUL_1765|M.ulcerans_Agy99 DKTYNAGVKVETATVDRRDTTYLYRDGSDFVFMDSQDYEQHPLPESLVGD MAB_2837c|M.abscessus_ATCC_199 DKTFNAGVKVETATVDRRDTTYLYRDGDSFVFMDSQDYEQHHLSPELVGD MAV_3411|M.avium_104 DKTYNAGVKVETATVDRRDTTYLYRDGSDFVFMDSQDYEQHPLPESLVGD Mflv_3752|M.gilvum_PYR-GCK DKTYNAGVKVETATVDRRDATYLYRDGSDFVFMDSEDFEQHPLPEALVGR Mvan_2651|M.vanbaalenii_PYR-1 DKTYNAGVKVETATVDRRDATYLYRDGSDFVFMDSEDYEQHPLPEALVGR MSMEG_3035|M.smegmatis_MC2_155 DKTYNAGVKVETATVDRRDATYLYRDGSDFVFMDSEDFEQHPLPESLVGR TH_0105|M.thermoresistible__bu DKTFNAGVKVETATVDRRDATYLYRDGSDFVFMDSENYEQHPLPESMVGD ***:******:********:******* .******:::*** *. :** Mb2563c|M.bovis_AF2122/97 AARFLLEGMPVQVAFHNGVPLYIELPVTVELEVTHTEPGLQGDRSSAGTK Rv2534c|M.tuberculosis_H37Rv AARFLLEGMPVQVAFHNGVPLYIELPVTVELEVTHTEPGLQGDRSSAGTK MLBr_00522|M.leprae_Br4923 TARFLLEGMSVQVAFHNGVPLYVELPVTVELEVTHTEPGLQGDRSSAGTK MMAR_2181|M.marinum_M AARFLLEGMPVQVAFHDGAPLYIELPVTVEIVVTHTEPGLQGDRSSAGTK MUL_1765|M.ulcerans_Agy99 AARFLLEGMPVQVAFHDGAPLYIELPVTVEFVVTHTEPGLQGDRSSAGTK MAB_2837c|M.abscessus_ATCC_199 AHRFLLEGMTVQVAFNEGAALYIELPVSVELEVTHTEPGLQGDRSSAGTK MAV_3411|M.avium_104 AARFLLEGMPVQVAFHNGSPLYIELPVSVEMEVTHTEPGLQGDRSSAGTK Mflv_3752|M.gilvum_PYR-GCK LAGFLLESMPVQIAFHDGVPLYLELPVTVELLVAHTEPGLQGDRSSAGTK Mvan_2651|M.vanbaalenii_PYR-1 AADFLLESMPVQIAFHDGSPLYLELPVTVELVVASTEPGLQGDRSSAGTK MSMEG_3035|M.smegmatis_MC2_155 LADFLLESMPVQIAFHDGTPLYLELPVSVELEVTHTEPGLQGDRSSAGTK TH_0105|M.thermoresistible__bu AAKFLLESLPVQIAFHDGSPLYLELPVSVELEVTHTEPGLQGDRSSAGTK ****.:.**:**::* .**:****:**: *: *************** Mb2563c|M.bovis_AF2122/97 PATLQTGAQINVPLFINTGDKLKVDSRDGSYLGRVNA Rv2534c|M.tuberculosis_H37Rv PATLQTGAQINVPLFINTGDKLKVDSRDGSYLGRVNA MLBr_00522|M.leprae_Br4923 PATLETGAQINVPLFINTGDKLKVDSRDGSYLGRVNV MMAR_2181|M.marinum_M PATLETGAQINVPLFINTGDKLKVDSRDGGYLGRVNA MUL_1765|M.ulcerans_Agy99 PATLETGAQINVPLFINTGDKLKVDSRDGGYLGRVNA MAB_2837c|M.abscessus_ATCC_199 PATVETGAEIQVPLFINTGDRLKVDTRDASYLGRVNG MAV_3411|M.avium_104 PATVETGAEIQVPLFINTGDKLKVDTRDGSYLGRVNA Mflv_3752|M.gilvum_PYR-GCK PATMETGAEIQVPLFINTGDKLKVDSRDGSYLGRVNA Mvan_2651|M.vanbaalenii_PYR-1 PATLETGAEIQVPLFINTGDKLKVDSRDGSYLGRVNA MSMEG_3035|M.smegmatis_MC2_155 PATVETGAEIQVPLFINTGDRLKVDTRDGSYLGRVNA TH_0105|M.thermoresistible__bu PATVETGAEIQVPLFINTGDKVKVDTRDGSYLGRVTN ***::***:*:*********::***:**..*****.