For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MNLAQIANPPATSDRRIRSFSAIPSPHDVLTEFPLGARRAERVAADRDEVADILAGRDNRLLVVVGPCSV HDPAAALEYASRLVKVAEELKDTVKIVMRVYFEKPRTTIGWKGLINDPGMDGTFDVARGLRIARQLLLDI IDIGLPVGCEFLEPTSPQYIADAVAWGAIGARTTESQVHRQLASGLSMPVGFKNGTDGNVQVAVDGAKSA AAEHVFFGMDDMGRGAVVSTAGNEDCHVILRGGTRGPNYDAESVRAAAAKLAKAGLPGRVVIDCSHANSG KDHIRQAVVATEVAQMVRDGQPISGVMLESFLVGGAQSPDAETLTYGQSVTDKCMDWDATDLVLRELARR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_2799 | - | - | 100% (350) | phospho-2-dehydro-3-deoxyheptonate aldolase |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_4919 | - | 1e-171 | 85.06% (348) | phospho-2-dehydro-3-deoxyheptonate aldolase |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | MAV_2007 | - | 1e-132 | 68.77% (349) | phospho-2-dehydro-3-deoxyheptonate aldolase |
M. thermoresistible (build 8) | TH_1686 | - | 1e-173 | 84.57% (350) | phospho-2-dehydro-3-deoxyheptonate aldolase |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_1501 | - | 0.0 | 89.43% (350) | phospho-2-dehydro-3-deoxyheptonate aldolase |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_2799|M.smegmatis_MC2_155 MNLAQIANPP-ATSDRRIRSFSAIPSPHDVLTEFPLGARRAERVAADRDE Mvan_1501|M.vanbaalenii_PYR-1 MTLAQTATPP-ATSDRRIRSFGEIPSPHAVSTEFPLGARRAERVARDRDE Mflv_4919|M.gilvum_PYR-GCK MTLAQTATSQ-ETSDRRIRRFSEIPSPHDVLTEFPLGARRAERVARDREE TH_1686|M.thermoresistible__bu MNSAQITTAP-KTSDRRIRGFLEIPSPHDVLSEFPLGARRAELVARDRDE MAV_2007|M.avium_104 MSLTECATAAVDTSDHRIVSFRELSAPAAIRAELPLTPRRARAVQRDRDD *. :: :.. ***:** * :.:* : :*:** .***. * **:: MSMEG_2799|M.smegmatis_MC2_155 VADILAGRDNRLLVVVGPCSVHDPAAALEYASRLVKVAEELKDTVKIVMR Mvan_1501|M.vanbaalenii_PYR-1 IADILAGRDDRLLVVVGPCSVHDPAAALEYAGRLVKIAAELKDSLKIVMR Mflv_4919|M.gilvum_PYR-GCK IADILAGRDDRLLVVVGPCSVHDPAAALDYASRLVKVADDLGDRLKVVMR TH_1686|M.thermoresistible__bu IADILAGRDDRLLAVVGPCSVHDPAAALDYASRLVKVAEELRDDLKVVMR MAV_2007|M.avium_104 IAAILAGADDRLLLVVGPCSVHDPVAALDYARRLAPIAAEFADRLKIVMR :* **** *:*** **********.***:** **. :* :: * :*:*** MSMEG_2799|M.smegmatis_MC2_155 VYFEKPRTTIGWKGLINDPGMDGTFDVARGLRIARQLLLDIIDIGLPVGC Mvan_1501|M.vanbaalenii_PYR-1 VYFEKPRTTIGWKGLINDPGMDGTFDVARGLRIARQLLLDIIDIGLPVGC Mflv_4919|M.gilvum_PYR-GCK VYFEKPRTTTGWKGLINDPGMDGSFDVARGLRTARQLLLDIIDIGLPVGC TH_1686|M.thermoresistible__bu VYFEKPRTTVGWKGLINDPAMDGTFDVARGLRIARQLLLDVIDIGLPVGC MAV_2007|M.avium_104 VYFEKPRTTIGWKGLINDPAMDSSFDVERGIRTARALLLDIIDVGLPVGC ********* *********.**.:*** **:* ** ****:**:****** MSMEG_2799|M.smegmatis_MC2_155 EFLEPTSPQYIADAVAWGAIGARTTESQVHRQLASGLSMPVGFKNGTDGN Mvan_1501|M.vanbaalenii_PYR-1 EFLEPTSPQYIADAVAWGAIGARTTESQVHRQLASGLSMPVGFKNGTDGN Mflv_4919|M.gilvum_PYR-GCK EFLEPTSPQYIADAVAWGAIGARTTESQVHRQLASGLSMPVGFKNGTDGN TH_1686|M.thermoresistible__bu EFLEPNSPQYIADAVAWGAIGARTTESQVHRQLASGLSMPVGFKNGTDGN MAV_2007|M.avium_104 EFLEPTSPQYIADAVAWGAIGARTTESQVHRQLASGLSMPIGFKNGTDGN *****.**********************************:********* MSMEG_2799|M.smegmatis_MC2_155 VQVAVDGAKSAAAEHVFFGMDDMGRGAVVSTAGNEDCHVILRGGTRGPNY Mvan_1501|M.vanbaalenii_PYR-1 IQVAVDGAKSAAAQHVFFGMDDMGRGAVVSTEGNRDCHVILRGGTGGPNW Mflv_4919|M.gilvum_PYR-GCK IQVAVDGVKAAAAPHVFFGMTDMGRGALVSTTGNQDCHVILRGGTDGPNC TH_1686|M.thermoresistible__bu IQVAVDGVKAAAAPHVFFGMDDLGRGALVSTEGNEDCHVILRGGSRGPNW MAV_2007|M.avium_104 VQVAIDGVKAAAAPHHFFGTDDVGRAAVVETMGNPDCHVILRGGTAGPNY :***:**.*:*** * *** *:**.*:*.* ** *********: *** MSMEG_2799|M.smegmatis_MC2_155 DAESVRAAAAKLAKAGLPGRVVIDCSHANSGKDHIRQAVVATEVAQMVRD Mvan_1501|M.vanbaalenii_PYR-1 DAESVRSAADKLESAGLPGRVVIDCSHANSGKDHVRQASVAAEVAQLVRD Mflv_4919|M.gilvum_PYR-GCK DAASVTVTAEKLVTAGLPGRVVIDCSHANSGKDHIRQVQVAKDVAQLVRD TH_1686|M.thermoresistible__bu DAESVRQTADMLTAAGLPGRVVVDCSHANSGKDHVRQAEVAVEVAKLVRA MAV_2007|M.avium_104 DAGSVAGAIERLSAAGLSPRVMVDCSHANSAKDHVRQAEVAAELIARIAA ** ** : * ***. **::*******.***:**. ** :: : MSMEG_2799|M.smegmatis_MC2_155 GQP-ISGVMLESFLVGGAQSPDAETLTYGQSVTDKCMDWDATDLVLRELA Mvan_1501|M.vanbaalenii_PYR-1 GLP-VSGVMLESFLVAGAQAPEARPLTYGQSVTDKCMDWGATDLVLRELA Mflv_4919|M.gilvum_PYR-GCK GLP-ISGVMLESFLVAGAQAPEAQPLTYGQSVTDKCMDWGATDLVLRELA TH_1686|M.thermoresistible__bu GLP-ISGVMLESFLVAGAQSPDTKPLTYGQSVTDKCMDWATTDSVLRELA MAV_2007|M.avium_104 GERGIGGLMLESFLVAGAQ-PLGGELTYGQSVTDECMDFATTARLLAGLY * :.*:*******.*** * *********:***: :* :* * MSMEG_2799|M.smegmatis_MC2_155 RR-- Mvan_1501|M.vanbaalenii_PYR-1 RRG- Mflv_4919|M.gilvum_PYR-GCK NHG- TH_1686|M.thermoresistible__bu KRR- MAV_2007|M.avium_104 AAMG