For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
TITHSVLVAGIGNIFLGDDGFGPEVLRRVPPDVAAAGVRLCDYGIRGLHLAYDLLEGWDLLVLVDALPCR VRPGTLRVFEADPMDTTPGLDAHAMDPAAVFATVRALGGAVPPTVVIGCEVGSVAEGIGLSDAVAAAVPA AVEAIRSAVADHRTPVRRT*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_2713 | - | - | 100% (160) | peptidase M52, hydrogen uptake protein |
M. smegmatis MC2 155 | MSMEG_2264 | - | 2e-10 | 30.32% (155) | peptidase M52, hydrogen uptake protein |
M. smegmatis MC2 155 | MSMEG_3927 | - | 3e-09 | 34.67% (150) | peptidase M52, hydrogen uptake protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_1864 | hyaD | 1e-48 | 60.62% (160) | nickel/iron hydrogenase maturation factor, HyaD |
M. avium 104 | MAV_2687 | - | 5e-37 | 67.83% (115) | peptidase M52, hydrogen uptake protein |
M. thermoresistible (build 8) | TH_1948 | - | 3e-48 | 65.79% (152) | peptidase M52, hydrogen uptake protein |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_2409 | - | 2e-53 | 67.97% (153) | hydrogenase maturation protease |
CLUSTAL 2.0.9 multiple sequence alignment TH_1948|M.thermoresistible__bu -----------------------------------VTG-LTDNRPAILVA Mvan_2409|M.vanbaalenii_PYR-1 -----------------------------------MTGREASITPRILVA MSMEG_2713|M.smegmatis_MC2_155 ----------------------------------------MTITHSVLVA MMAR_1864|M.marinum_M ------------------------------------------MTARILVA MAV_2687|M.avium_104 MGVYRHPVADRPGSSDLGTHIPSGRKALPAHPTDVKQPDRGNVTSRILIA :*:* TH_1948|M.thermoresistible__bu GIGNIFLGDDGFGSEVLRRLPRNLAPHRRSARVRATDYGIGGMHLAYDLL Mvan_2409|M.vanbaalenii_PYR-1 GIGNIFLGDDGFGPEVIRRIPHRLA----GPCVRLKDYGIRGMHLAYDLL MSMEG_2713|M.smegmatis_MC2_155 GIGNIFLGDDGFGPEVLRRVPPDVA----AAGVRLCDYGIRGLHLAYDLL MMAR_1864|M.marinum_M GIGNIFLGDDGFGSEVVRRADIPQN----DPGVRVIDYGIRGMHLAYDLL MAV_2687|M.avium_104 GIGNIFLGDDGFGPEVLRHVAPRFAA---AEQVRAIDYGIGGMHLAYDLL *************.**:*: ** **** *:******* TH_1948|M.thermoresistible__bu DEWDALVLVDALPVQGHPGRLHVF----EADTEGHTGAAGLDAHAMDPTA Mvan_2409|M.vanbaalenii_PYR-1 GPWSALVLVDAVPDRGAPGTVHMF----EADPETLTTPTALDAHAMDPGA MSMEG_2713|M.smegmatis_MC2_155 EGWDLLVLVDALPCRVRPGTLRVF----EADPMDTT--PGLDAHAMDPAA MMAR_1864|M.marinum_M DSWDTLVLVDAVPSRGNPGTLHVFQADFEADQASWSEAPGLDAHGMDPGT MAV_2687|M.avium_104 EDWDALVLVDAVPNQGAPGTVCVF----EADHASLSTTAELDAHGMDPAA *. ******:* : ** : :* *** : . ****.*** : TH_1948|M.thermoresistible__bu VFAGLTALGGVAPHTVVVGCEVASVDEAIGLSAPVAAAVPDAVRAVREVV Mvan_2409|M.vanbaalenii_PYR-1 VFACLNALGGAAPRTVVVGCEVETVEEGIGLSETVAAAVPAAVRAVEDVV MSMEG_2713|M.smegmatis_MC2_155 VFATVRALGGAVPPTVVIGCEVGSVAEGIGLSDAVAAAVPAAVEAIRSAV MMAR_1864|M.marinum_M VFANLRALGGNPPYTVVVGCEAGSVEEGIGLTEPVAKAVPRAARAVEEIV MAV_2687|M.avium_104 VFASLQALGGAP-------CPPSSSAFS-GLSRAARERIGGSNSPMGWWR *** : **** * : . **: .. : : .: TH_1948|M.thermoresistible__bu SRLLDRTALPGTG--- Mvan_2409|M.vanbaalenii_PYR-1 ADLLARSMVERA---- MSMEG_2713|M.smegmatis_MC2_155 AD--HRTPVRRT---- MMAR_1864|M.marinum_M AALQGPATAQSTGEEV MAV_2687|M.avium_104 AQLL------------ :