For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
AGSAPLRILVYSDNPRTREQVRLALGKRIHPELPEIEYVDVATAPMAISQMDAGGFDLAILDGEATPAGG MGVAKQVKDEIDDCPPILVLTGRADDAWLAKWSRAEAAVPHPIDPIRLSDAVVSLLRAPAQ*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_2064 | - | - | 100% (132) | two-component system response regulator |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3167 | - | 9e-53 | 74.22% (128) | response regulator |
M. gilvum PYR-GCK | Mflv_4480 | - | 3e-60 | 84.80% (125) | response regulator receiver protein |
M. tuberculosis H37Rv | Rv3143 | - | 9e-53 | 74.22% (128) | response regulator |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_2133 | - | 1e-36 | 58.14% (129) | response regulator |
M. marinum M | MMAR_1486 | - | 3e-52 | 73.44% (128) | two-component system response regulator |
M. avium 104 | MAV_4032 | - | 1e-50 | 68.99% (129) | two-component system response regulator |
M. thermoresistible (build 8) | TH_0638 | - | 1e-50 | 72.80% (125) | PROBABLE RESPONSE REGULATOR |
M. ulcerans Agy99 | MUL_2453 | - | 2e-52 | 73.44% (128) | two-component system response regulator |
M. vanbaalenii PYR-1 | Mvan_1886 | - | 3e-60 | 84.92% (126) | response regulator receiver protein |
CLUSTAL 2.0.9 multiple sequence alignment Mb3167|M.bovis_AF2122/97 ----------------MPDS---STALRILVYSDNVQTRERVMRALGKRL Rv3143|M.tuberculosis_H37Rv ----------------MPDS---STALRILVYSDNVQTRERVMRALGKRL MMAR_1486|M.marinum_M MVPPGAGQPETSSICTVADS---SEDLRILVYSDNVQTREQVVRALGKRL MUL_2453|M.ulcerans_Agy99 ----------------MADS---SEDLRILVYSDNVQTREQVVRALGKRL MAV_4032|M.avium_104 ------------MSDSTPQS---SVALRILVYSSNAQTRERVMRALGRHL Mflv_4480|M.gilvum_PYR-GCK ------------MVVPSAET---RGVLRVLVYSDNPRTREQVRLALGRRI Mvan_1886|M.vanbaalenii_PYR-1 ------------MAAPSSESSRAQDPLRILVYSDNPRTREQVRLALGRRI MSMEG_2064|M.smegmatis_MC2_155 ------------MAG--------SAPLRILVYSDNPRTREQVRLALGKRI TH_0638|M.thermoresistible__bu ------------VSRPVDD----AAALRILVYSDDPRTRDAVRTALGTRL MAB_2133|M.abscessus_ATCC_1997 ------------------------MALQVLVYSDDITVRRKVIQGIGARP *::****.: .* * .:* : Mb3167|M.bovis_AF2122/97 HPDLPDLTYVEVATGPMVIRQMDRG----GIDLAILDGEATPTGGMGIAK Rv3143|M.tuberculosis_H37Rv HPDLPDLTYVEVATGPMVIRQMDRG----GIDLAILDGEATPTGGMGIAK MMAR_1486|M.marinum_M HPDLPALTYVEVATGPMVLRRMDEG----GIDLAILDGEATPTGGMGIAK MUL_2453|M.ulcerans_Agy99 HPDLPALTYVEVATGPMVLRRMDEG----GIDLAILDGEATPTGGMGIAK MAV_4032|M.avium_104 HPDLPELSYVEVATGPMVVKTMDQG----GIDLAILDGEATPTGGMGIAK Mflv_4480|M.gilvum_PYR-GCK HPELPELDYVEVATGPMVVRQMDAG----GFDLAILDGEATPVGGMGIAK Mvan_1886|M.vanbaalenii_PYR-1 HPELPELSYLEVATGPMVIRQMDEG----GFDLAILDGEAAPVGGMGIAK MSMEG_2064|M.smegmatis_MC2_155 HPELPEIEYVDVATAPMAISQMDAG----GFDLAILDGEATPAGGMGVAK TH_0638|M.thermoresistible__bu HPDLPELGYQEVATEPMVHEHLRSG----HFDLVILDGEATPAGGMGIAK MAB_2133|M.abscessus_ATCC_1997 DSALPPLEFVEVATGPMVIERLAAPGSLPGIDLAILDGEATPFGGMGVAK .. ** : : :*** **. : :**.******:* ****:** Mb3167|M.bovis_AF2122/97 QLKDELASCPPILVLTGRPDDTWLASWSRAEAAVPHPVDPIVLGRTVLSL Rv3143|M.tuberculosis_H37Rv QLKDELASCPPILVLTGRPDDTWLASWSRAEAAVPHPVDPIVLGRTVLSL MMAR_1486|M.marinum_M QLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGRTVLGL MUL_2453|M.ulcerans_Agy99 QLKDELDNCPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPIVLGRTVLGL MAV_4032|M.avium_104 QLKDELDACPPLVVLTGRPDDAWLASWSRAEAAVPHPIDPILLGRTVLNL Mflv_4480|M.gilvum_PYR-GCK QLKDELDVCPPILVLTGRPDDAWLARWSRAEAAVPHPIDPIRLGDAVVSL Mvan_1886|M.vanbaalenii_PYR-1 QLKDEIDDCPPVLVLTRRADDAWLARWSRAEAAVPHPIDPIRLGDAVVSL MSMEG_2064|M.smegmatis_MC2_155 QVKDEIDDCPPILVLTGRADDAWLAKWSRAEAAVPHPIDPIRLSDAVVSL TH_0638|M.thermoresistible__bu QLKDELADCPPVLVLTGRRDDAWLARWSRAEAAVPQPIDPIELGDAVLSL MAB_2133|M.abscessus_ATCC_1997 QVKDEVDAPPPIVILTGRPQDNWLASWSRAEAVVPRPIDPMRLTATVIDL *:***: **:::** * :* *** ******.**:*:**: * :*:.* Mb3167|M.bovis_AF2122/97 LRAPAH--- Rv3143|M.tuberculosis_H37Rv LRAPAH--- MMAR_1486|M.marinum_M LRAPAL--- MUL_2453|M.ulcerans_Agy99 LRAPAL--- MAV_4032|M.avium_104 LRTPVR--- Mflv_4480|M.gilvum_PYR-GCK LRPAA---- Mvan_1886|M.vanbaalenii_PYR-1 LRPSA---- MSMEG_2064|M.smegmatis_MC2_155 LRAPAQ--- TH_0638|M.thermoresistible__bu LRTRTS--- MAB_2133|M.abscessus_ATCC_1997 LGSAAASRR * . .