For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTGSDTTAYSTARTVEDFTRNLQAVNTRIGAALQRAGREPGEVRLLPVSKTVDEDRLRVAAAAGCTMFGE NKVQEAMRKWRNLSDLDVEWSVIGHLQTNKAKDVAEFAAEFQALDNPRAAAALDRRLQALGRQLDVYVQV NTSGEESKYGLAPDDVIPFLKTLPAYTALRVRGLMTIAVFSTDPERVRPCFRLLRSLRDQARDLDLIGPG ELSMGMSGDYELAIAEGSTCVRVGQAIFGARPTPDSQYWPGN
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_2032 | - | - | 100% (252) | hypothetical protein MSMEG_2032 |
M. smegmatis MC2 155 | MSMEG_4220 | - | 3e-29 | 35.14% (259) | hypothetical protein MSMEG_4220 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2172c | - | 1e-28 | 33.85% (257) | hypothetical protein Mb2172c |
M. gilvum PYR-GCK | Mflv_2993 | - | 2e-27 | 33.85% (257) | alanine racemase domain-containing protein |
M. tuberculosis H37Rv | Rv2148c | - | 1e-28 | 33.85% (257) | hypothetical protein Rv2148c |
M. leprae Br4923 | MLBr_00919 | - | 6e-29 | 35.29% (238) | putative DNA-binding protein |
M. abscessus ATCC 19977 | MAB_2011 | - | 1e-31 | 36.60% (235) | hypothetical protein MAB_2011 |
M. marinum M | MMAR_3188 | - | 9e-27 | 32.65% (245) | hypothetical protein MMAR_3188 |
M. avium 104 | MAV_2342 | - | 1e-29 | 33.84% (263) | hypothetical protein MAV_2342 |
M. thermoresistible (build 8) | TH_2376 | - | 6e-24 | 34.24% (257) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_3496 | - | 1e-25 | 31.15% (244) | hypothetical protein MUL_3496 |
M. vanbaalenii PYR-1 | Mvan_3518 | - | 9e-30 | 35.22% (247) | alanine racemase domain-containing protein |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_3188|M.marinum_M MTAMVVDISAQGERQSELTHALAVVRSRLAAAAEAAGRKVSEIELLPITK MUL_3496|M.ulcerans_Agy99 ---MVVDISAQGERQSELTHALALVRSRLAAAAEAAGRKVSEIELLPITK Mb2172c|M.bovis_AF2122/97 ---MAADLSAYPDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITK Rv2148c|M.tuberculosis_H37Rv ---MAADLSAYPDRESELTHALAAMRSRLAAAAEAAGRNVGEIELLPITK MLBr_00919|M.leprae_Br4923 MTAMAADIDLQGDRESELMHALATVRSRLAAASQAAGRNVGEIELLPISK MAV_2342|M.avium_104 MTAGTPAPDSAGDRETELTHALAAVRSRLAAAAEAAGRNVAEIEVLPVTK Mflv_2993|M.gilvum_PYR-GCK ---------MTSEREAELRAALDALRVRLARAAESAGRDVAEIELLPVIK Mvan_3518|M.vanbaalenii_PYR-1 ---------MTAARDAELSLALTALRLRVARAAEAAGRDAGDIELLPVTK TH_2376|M.thermoresistible__bu -----------------LAVALAALRARLEQAAVAAGRAADEIELLPITK MAB_2011|M.abscessus_ATCC_1997 -----------MTRAEELSAALCSVRERVRRAAEIAGRDPGEIQLLPVTK MSMEG_2032|M.smegmatis_MC2_155 MTGSDTTAYSTARTVEDFTRNLQAVNTRIGAALQRAGREPGEVRLLPVSK : * :. *: * *** ::.:**: * MMAR_3188|M.marinum_M FFPATDVAILARLGCRAVGESRDQEASAKVAELARLFSAPIRSGSRGIQW MUL_3496|M.ulcerans_Agy99 FFPATDVAILARLGCRAVGESRDQEASAKVAELARMFSAPMRSGSRGIQW Mb2172c|M.bovis_AF2122/97 FFPATDVAILFRLGCRSVGESREQEASAKMAELNRLLAAAELGHSGGVHW Rv2148c|M.tuberculosis_H37Rv FFPATDVAILFRLGCRSVGESREQEASAKMAELNRLLAAAELGHSGGVHW MLBr_00919|M.leprae_Br4923 FFPATDVAILSRLGCRSVGESRAQEASTKAAEFAELLGVSREEKS-SIHW MAV_2342|M.avium_104 FFPATDVVTLSRLGCRAVGESRDQEATAKVAEVTRLLATSARTNVAIPRW Mflv_2993|M.gilvum_PYR-GCK FFPASDVLALYRLGCDAFAESRDQEATAKIEDVAR-VVGSR--EDTPIRW Mvan_3518|M.vanbaalenii_PYR-1 FFPASDVVALHRLGCSAFGESRDQEAAAKVEEVGG-LVG-----NDPIRW TH_2376|M.thermoresistible__bu FFPASDVLILHGLGISAFGESREQEASAKIAEVNRNLSVEQ--NASPIRW MAB_2011|M.abscessus_ATCC_1997 FFPASDVEELYRLGCREFGESRDQEAAAKVALLDQ-------AGHADIRW MSMEG_2032|M.smegmatis_MC2_155 TVDEDRLRVAAAAGCTMFGENKVQEAMRKWRNLSD----------LDVEW . : * ..*.: *** * . .* MMAR_3188|M.marinum_M HMVGQIQRNKVRSLANWAHTAHSIDTPQLVTALDRAITTAIADRRRGNPL MUL_3496|M.ulcerans_Agy99 HMVGQIQRNKVRSLANWAHTAHSIDTPQLVTALDRAITTAIADRRRGNPL Mb2172c|M.bovis_AF2122/97 HMVGRIQRNKAGSLARWAHTAHSVDSSRLVTALDRAVVAALAEHRRGERL Rv2148c|M.tuberculosis_H37Rv HMVGRIQRNKAGSLARWAHTAHSVDSSRLVTALDRAVVAALAEHRRGERL MLBr_00919|M.leprae_Br4923 HMVGQIQRNKVRSLAQWAHTAHSIDSLQLVAALDRAVAAALAGGRREQPL MAV_2342|M.avium_104 HMVGHIQRNKARSVARWAHTAHSVDSTHLVSALDRGVAAALADGGRIDPM Mflv_2993|M.gilvum_PYR-GCK HMVGRIQRNKARSVAEWAYAAHSVDSVKVVAALERSASTALEEGRRTEPL Mvan_3518|M.vanbaalenii_PYR-1 HMVGRIQRNKARSVAQWAYAAHSVDSPKVIAALDRAAEEALDDGRRPAPL TH_2376|M.thermoresistible__bu HMVGRIQRNKARAVARWAYAAHSVDNAKLVAALSRGAVQALDEGVRTAPV MAB_2011|M.abscessus_ATCC_1997 HMVGNLQRNKAKSVAHWAHSVHSVDNARLVTALDG----ARGAGEKREPL MSMEG_2032|M.smegmatis_MC2_155 SVIGHLQTNKAKDVAEFAAEFQALDNPRAAAALDR------RLQALGRQL ::*.:* **. :*.:* :::*. : :**. : MMAR_3188|M.marinum_M RVYVQVSLDGDVSRGGVDMTDPGAVDRICAQVSDAQSLELIGLMGVPPRD MUL_3496|M.ulcerans_Agy99 RVHVQVSLDGDVSRGGVDMTDPGAVDRICAQVSDSQSLELIGLMGVPPRD Mb2172c|M.bovis_AF2122/97 RVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQESEGLELVGLMGIPPLD Rv2148c|M.tuberculosis_H37Rv RVYVQVSLDGDGSRGGVDSTTPGAVDRICAQVQESEGLELVGLMGIPPLD MLBr_00919|M.leprae_Br4923 QVYVQISLDGDISRGGVNVTAPGAVDRVCAQVEESKSLELVGLMGIPPLG MAV_2342|M.avium_104 RVYVQVSLDGDESRGGVDISRPGAVDEVCAQVAAANNLDLVGLMAIPPLN Mflv_2993|M.gilvum_PYR-GCK RVFAQLSLDGDEARGGVDVDATERVDELCAAMDRAGGLTFAGMMAIPPLG Mvan_3518|M.vanbaalenii_PYR-1 RVYLQVSLDGDEARGGVDVAATDRIDDLCGAVDSARGLEFVGLMAIPPLN TH_2376|M.thermoresistible__bu RVYVQVSLDGDERRGGVDVGRPQLVDELCAAVHDAAGLELVGLMGIPPLN MAB_2011|M.abscessus_ATCC_1997 GIYLQVSLDGDNARGGVDIAAADEIDQLCAQVVASEHLELAGLMALPPRE MSMEG_2032|M.smegmatis_MC2_155 DVYVQVNTSGEESKYGL---APDDVIPFLKTLPAYTALRVRGLMTIAVFS :. *:. .*: : *: . : . : * . *:* :. MMAR_3188|M.marinum_M WDQE---KAFERLQSEHSRVLESFPTAVR-LSAGMSDDLEIAVKHGSTCV MUL_3496|M.ulcerans_Agy99 WDQE---KAFERLQSEHNRVLESFPTAVR-LSAGMSDDLEIAVKHGSTCV Mb2172c|M.bovis_AF2122/97 WDPD---EAFDRLQSEHNRVRAMFPHAIG-LSAGMSNDLEVAVKHGSTCV Rv2148c|M.tuberculosis_H37Rv WDPD---EAFDRLQSEHNRVRAMFPHAIG-LSAGMSNDLEVAVKHGSTCV MLBr_00919|M.leprae_Br4923 WNPD---QAFEQLRLEHRRVLRSHPDAIG-LSAGMSNDFEIAVKHGSTCV MAV_2342|M.avium_104 SDPD---EAFDRLQSEHRRVLETHRNAVG-LSAGMSDDFEIAVKHGSTCV Mflv_2993|M.gilvum_PYR-GCK ADPG---EAFARLRQERDRVQRDYEQRLG-LSAGMSGDLEAAVRHGSTCV Mvan_3518|M.vanbaalenii_PYR-1 ADAG---EAFARLERERDRVQRRFQQRLG-LSAGMSGDLEEAVRHGSTCV TH_2376|M.thermoresistible__bu WDAE---EAFARLAAEHARVQEGYSHRLG-LSAGMSGDLEAAVKHGSTCV MAB_2011|M.abscessus_ATCC_1997 ADPD---QAFRRLQQEHERVRDRYPQANR-LSAGMSNDLEAAIKYGSTCV MSMEG_2032|M.smegmatis_MC2_155 TDPERVRPCFRLLRSLRDQARDLDLIGPGELSMGMSGDYELAIAEGSTCV : .* * : :. ** ***.* * *: ***** MMAR_3188|M.marinum_M RVGTALLGSRRLRSP------------------------------ MUL_3496|M.ulcerans_Agy99 RVGTALLGSRRLRSP------------------------------ Mb2172c|M.bovis_AF2122/97 RVGTALLGPRRLRSP------------------------------ Rv2148c|M.tuberculosis_H37Rv RVGTALLGPRRLRSP------------------------------ MLBr_00919|M.leprae_Br4923 RVGTALLGPSRLRSP------------------------------ MAV_2342|M.avium_104 RVGTALLGRRPLPSP------------------------------ Mflv_2993|M.gilvum_PYR-GCK RVGTALMGSRPLTSPEVVTRVTPSSQTTPPLDFPESASPQEGSEQ Mvan_3518|M.vanbaalenii_PYR-1 RVGTALLGSRPLTSPEVVTPVTPSSQTPDSPELPESSPP-EGSSQ TH_2376|M.thermoresistible__bu RVGTALLGPRPLTSPAVVTPVTPSSQTPPITRASEGSRD-EHTA- MAB_2011|M.abscessus_ATCC_1997 RVGTALMGQRPLTSR------------------------------ MSMEG_2032|M.smegmatis_MC2_155 RVGQAIFGARPTPDSQYWPGN------------------------ *** *::* .