For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_1915 (-)

annotation: anti-sigma factor, family protein
coordinates: 1997670 - 1997975
length: 101

MSETEREDERWTPPIGPIDPEHPECAAVIAEVWTLLDGECTPETRDKLKQHLEECPTCLRHYGIEERVKR
LIAAKCSGEKAPDSLRERLRIQISRTTIIRG
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_1915--100% (101)anti-sigma factor, family protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3248c-2e-3274.03% (77) anti-sigma factor
M. gilvum PYR-GCKMflv_4688-1e-4782.47% (97) hypothetical protein Mflv_4688
M. tuberculosis H37Rv-----
M. leprae Br4923-----
M. abscessus ATCC 19977MAB_3542c-4e-3069.74% (76) hypothetical protein MAB_3542c
M. marinum MMMAR_1335-6e-3479.22% (77) anti-sigma factor
M. avium 104-----
M. thermoresistible (build 8)TH_0666-9e-4276.04% (96) POSSIBLE ANTI-SIGMA FACTOR
M. ulcerans Agy99MUL_2544-5e-3479.22% (77) anti-sigma factor
M. vanbaalenii PYR-1Mvan_1779-2e-4788.17% (93) hypothetical protein Mvan_1779

CLUSTAL 2.0.9 multiple sequence alignment


MMAR_1335|M.marinum_M               MSEVP--------GSPDSLPD---NEDSHGYFGCAEVIAEVWTLLDGECT
MUL_2544|M.ulcerans_Agy99           MSEVP--------GSPDSLPD---NEDSHGYFGCAEVIAEVWTLLDGECT
Mb3248c|M.bovis_AF2122/97           MSENC--------GPTDAHAD---HDDSHGGMGCAEVIAEVWTLLDGECT
Mflv_4688|M.gilvum_PYR-GCK          MSGIEGGGGVTD-NPEERWTP-PVGPIDPEHPECAAVIAEVWTLLDGECT
Mvan_1779|M.vanbaalenii_PYR-1       MSGTETPENETPGNSEDTWTP-PIGPIDPEHPECAAVIAEVWTLLDGECT
MSMEG_1915|M.smegmatis_MC2_155      MSETE--------REDERWTP-PIGPIDPEHPECAAVIAEVWTLLDGECT
TH_0666|M.thermoresistible__bu      VSDERSG------RDDGEWSSRSVGEIDPEHPDCAAVVAEVWMLLDGECT
MAB_3542c|M.abscessus_ATCC_199      MTDGELK------KSVDKSGN-------CEVSGCAEVIAEVWTLLDGECS
                                    ::                               ** *:**** ******:

MMAR_1335|M.marinum_M               PETRQKLREHLEACPGCLKHYGLEERIKLLIATKCQGEKAPEGLRERVRL
MUL_2544|M.ulcerans_Agy99           PETRQKLRKHLEACPGCLKHYGLEERIKLLIATKCQGEKAPEGLRERVRL
Mb3248c|M.bovis_AF2122/97           PETRERLRRHLEACPGCLRHYGLEERIKALIGTKCRGDRAPEGLRERLRL
Mflv_4688|M.gilvum_PYR-GCK          VETRDKLRQHLEECPACLRHYGVEEKIKRLIAMKCSGERAPEGFRERLRI
Mvan_1779|M.vanbaalenii_PYR-1       VETRDKLRQHLEECPTCLRYYGVEERVKKLIAAKCSGERAPDGLRERLRI
MSMEG_1915|M.smegmatis_MC2_155      PETRDKLKQHLEECPTCLRHYGIEERVKRLIAAKCSGEKAPDSLRERLRI
TH_0666|M.thermoresistible__bu      PENRDRLKRHLDECPACLRHYGVEERVKRLIAKKCSGEKAPDRLRQRLQI
MAB_3542c|M.abscessus_ATCC_199      PESSARLRHHLEECPGCLQHYGIEEQIKTLVARKCGGEKAPDGLRERLKL
                                     *.  :*:.**: ** **::**:**::* *:. ** *::**: :*:*:::

MMAR_1335|M.marinum_M               QISRTTIIRGGE---
MUL_2544|M.ulcerans_Agy99           QISRTTIIRGGE---
Mb3248c|M.bovis_AF2122/97           EIRRTTIIRGGP---
Mflv_4688|M.gilvum_PYR-GCK          QISQTTIIRQG----
Mvan_1779|M.vanbaalenii_PYR-1       QISQTTIIRRG----
MSMEG_1915|M.smegmatis_MC2_155      QISRTTIIRG-----
TH_0666|M.thermoresistible__bu      EISRTTIIRNG----
MAB_3542c|M.abscessus_ATCC_199      KISQTTVIQQRAENS
                                    :* :**:*: