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M. smegmatis MC2 155 MSMEG_1704 (-)

MRKLTWLAALLAALAMAMTLSGCGRSAEGGGGGDGDAKGTVGIAMPTKSSERWVADGQNMVDQFKALGYD
TDLQYGDDVVQNQVSQIENMITKGVKLLVIAPIDGSSLTNTLQHAADLKIPVISYDRLIKGTPNVDYYAT
FDNTKVGVLQANYIVDTLGVADGKGPFNLELFAGSPDDNNATYFFQGAMSVLQPYIDSGKLVVKSGQTTF
DQIATLRWDGGLAQSRMDNLLSQAYTSGRVDAVLSPYDGISRGVISALKSAGYGNAAKPLPIVTGQDAEL
ASVKSIVAGEQTQTVFKDTRELAKAAVQEADAVLTGGTPQVNDTETYDNGVKVVPSYLLDPVSVDKSNYK
KVLIDSGYYTETQVQ

Operon Prediction Model: Genebank

Paralogs

species	id	gene	e-value	identity (len)	annotation
M. smegmatis MC2 155	MSMEG_1704	-	-	100% (365)	ABC transporter
M. smegmatis MC2 155	MSMEG_6020	-	4e-45	35.75% (358)	D-xylose-binding periplasmic protein
M. smegmatis MC2 155	MSMEG_3598	-	1e-14	25.07% (339)	periplasmic sugar-binding proteins

Closest Orthologs (e-value cutoff: 1e-4)

species	id	gene	e-value	identity (len)	annotation
M. bovis AF2122 / 97	-	-	-	-	-
M. gilvum PYR-GCK	-	-	-	-	-
M. tuberculosis H37Rv	-	-	-	-	-
M. leprae Br4923	MLBr_00398	-	3e-08	26.16% (237)	putative D-ribose-binding protein
M. abscessus ATCC 19977	-	-	-	-	-
M. marinum M	-	-	-	-	-
M. avium 104	-	-	-	-	-
M. thermoresistible (build 8)	-	-	-	-	-
M. ulcerans Agy99	-	-	-	-	-
M. vanbaalenii PYR-1	Mvan_5293	-	3e-42	35.63% (348)	solute-binding protein

CLUSTAL 2.0.9 multiple sequence alignment


MSMEG_1704|M.smegmatis_MC2_155      MRKLTWLAALLAALAMAMTLSGCGRSAEGGGGGDGDAKGTVGIAMP-TKS
Mvan_5293|M.vanbaalenii_PYR-1       -MKRTSSLLFTAVVGVGLTLTACGSNSDSGS--TEARSGKVGVILPDTKS
MLBr_00398|M.leprae_Br4923          --MSTGTSVPLRVASIMLILGLLPAILPACGFSESHHKLTIGVSYP-TAN
                                        *       . .: : *        . .      . .:*:  * * .

MSMEG_1704|M.smegmatis_MC2_155      SERWVADGQ-NMVDQFKALGYDTDLQYGDDVVQNQVSQIENMITKGVKLL
Mvan_5293|M.vanbaalenii_PYR-1       SVRWETKDRPALAAAFQNAGVDYTIQNAEGSADTMATIADGMIADGVTVL
MLBr_00398|M.leprae_Br4923          SPFWNAYTR-FIDEGSHQLGVYINAVSAEEDEQKQLSDVETLINQGIDGL
                                    *  * :  :  :    :  *       .:   :.  :  : :* .*:  *

MSMEG_1704|M.smegmatis_MC2_155      VIAPIDGSSLTNTLQHAADLKIPVISYDR---LIKGTPNVDYYATFDNTK
Mvan_5293|M.vanbaalenii_PYR-1       AIVNLDSDSGASIQQKAASQGVKTIDYDR---LTLGG-SADVYVSFDNNV
MLBr_00398|M.leprae_Br4923          IVTPQSTSIAPTLLRIATQANIPVVVVDRYPGYAPGQNKNADYVAFLGPN
                                     :.  . .  ..  : *:.  : .:  **      *  .   *.:* .  

MSMEG_1704|M.smegmatis_MC2_155      VGVLQANYIVDTLGVADGKGPFNLELFAGSPDDNNATYFFQGAMSVLQPY
Mvan_5293|M.vanbaalenii_PYR-1       VGELQGQGLVDCLGGR----PANVVFLNGSPTDNNATLFSSGAHSVVD--
MLBr_00398|M.leprae_Br4923          N-EKAGSGIAEALMAG---GGSKFLALGGMPGNSVAQGRKAGLESALT--
                                         .. :.: *         :.  : * * :. *     *  *.:   

MSMEG_1704|M.smegmatis_MC2_155      IDSGKLVVKSGQTTFDQIATLRWDGGLAQSRMDNLLSQAYTSGRVDAVLS
Mvan_5293|M.vanbaalenii_PYR-1       -------ATPSITIVGEQAVPDWDNDKAVTIFEQLYTAAD--GRVDGVYA
MLBr_00398|M.leprae_Br4923          -------AVGHRLVQFQYAGDSEDKGLAAAEN---MLQAHPAGDANAIWC
                                           .        : *    * . * :        *   * .:.: .

MSMEG_1704|M.smegmatis_MC2_155      PYDGISRGVISALKSAGYGNAAKPLPIVTGQDAELASVKSIVAGEQTQTV
Mvan_5293|M.vanbaalenii_PYR-1       ANDGLAGSVISILEKNKRAGQVP----VTGQDATVEGLQNILAGTQCMTV
MLBr_00398|M.leprae_Br4923          FNDKLCQGAIKAVYNANREKEFI----FGGMDLTPQAIAAIENGLYTVSL
                                      * :. ..*. : .            . * *    .:  *  *    ::

MSMEG_1704|M.smegmatis_MC2_155      FKDTRELAKAAVQEADAVLTGGTPQVNDTETYDNGVKVVPSYLLDPVSVD
Mvan_5293|M.vanbaalenii_PYR-1       YKSATEEANALAEVAIALANGEQPQTTSTSRDDTGGRDVPSVLLTPKSIT
MLBr_00398|M.leprae_Br4923          GAHWLEGG-FGLAILYRKIHGQDPAERMVKLDLLKVDKSNVAKFKARYID
                                         * .            *  *    ..             : .  : 

MSMEG_1704|M.smegmatis_MC2_155      KSNYKKVLIDSGYYTETQVQ------------
Mvan_5293|M.vanbaalenii_PYR-1       KDNINVVFDDGGQSKDEVCSGQFAEACSAAGV
MLBr_00398|M.leprae_Br4923          NTPHYNWKSTTPFDMTITLN------------
                                    :                  .