For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_1631 (-)

annotation: DNA-binding protein
coordinates: 1721434 - 1722288
length: 284

VDKRELGAFLRSRRERISPAEVGLPVGTRRRTPGLRRDEVAHLAFISTEYYTRLEQARAPHPSREVLEGL
SRALRLPDAERAHLYQLAGVVPQRPVGPPRVVRQSILDLLQRLSHAAAIVVSATNEVLAWNDLACALMED
FSALSRRDRNLIRRAFLGPDGPGGRRLYGVSDVEEFARTSAKHLRAAVARYPDDPETQELVDELLAGSEE
FVRLWESHDIVDRPVLCKTFVHPAVGPVSVNCDALDIADRDQCLVIYTAEPGSPSEEAMRLLAVLGTQQM
DVPG
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_1631--100% (284)DNA-binding protein
M. smegmatis MC2 155MSMEG_0523-6e-5246.57% (277) DNA-binding protein
M. smegmatis MC2 155MSMEG_2428-2e-4943.97% (282) DNA-binding protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97-----
M. gilvum PYR-GCKMflv_5170-2e-2533.09% (272) XRE family transcriptional regulator
M. tuberculosis H37Rv-----
M. leprae Br4923-----
M. abscessus ATCC 19977MAB_3069c-2e-4437.55% (277) putative DNA-binding protein
M. marinum M-----
M. avium 104-----
M. thermoresistible (build 8)-----
M. ulcerans Agy99-----
M. vanbaalenii PYR-1Mvan_1062-1e-4740.44% (272) XRE family transcriptional regulator

CLUSTAL 2.0.9 multiple sequence alignment


MAB_3069c|M.abscessus_ATCC_199      MDKRAAAVQDARMIDRAGLAGFLRSRREAMQPDDVGLPRGQRRRTRGLRR
Mvan_1062|M.vanbaalenii_PYR-1       MDQRQ-------------LADFLRTRREALTPADVGLPTGRRRRTAGLRR
MSMEG_1631|M.smegmatis_MC2_155      MDKRE-------------LGAFLRSRRERISPAEVGLPVGTRRRTPGLRR
Mflv_5170|M.gilvum_PYR-GCK          MDTRAQR--------RLALGEFLRARREAIRRADVGLPELPRARTGGLRR
                                    ** *              *. ***:*** :   :****   * ** ****

MAB_3069c|M.abscessus_ATCC_199      EEVAALCHMSTDYYARLEGARGPQPSEQMIAAIAQGLHLSREERDHLFRL
Mvan_1062|M.vanbaalenii_PYR-1       EEVAALAMISTDYYSRMEQQRGPQPSVDVLASLARALQLTLDERDHLFRL
MSMEG_1631|M.smegmatis_MC2_155      DEVAHLAFISTEYYTRLEQARAPHPSREVLEGLSRALRLPDAERAHLYQL
Mflv_5170|M.gilvum_PYR-GCK          EEVAVTAGVSVTWYTWLEQGRDINPSKQVLDAVADALRLSPAEHEYVLAL
                                    :***  . :*. :*: :*  *  :** ::: .:: .*:*.  *: ::  *

MAB_3069c|M.abscessus_ATCC_199      AGHQPPASGGESEYISPGLMRIFDRLTPDTAAEIVTELGETLRQTPLGIA
Mvan_1062|M.vanbaalenii_PYR-1       AGHNAPARTPAGEQVSTAMLRILDRLS-DTPAQVMSALGETLVQTPAARA
MSMEG_1631|M.smegmatis_MC2_155      AGVVPQRPVGPPRVVRQSILDLLQRLS-HAAAIVVSATNEVLAWNDLACA
Mflv_5170|M.gilvum_PYR-GCK          GGYAVDAAVSRG-PLPPHIQHFLDALEGYPAFAITPDWG-IAAWNTTYAA
                                    .*            :   :  ::: *   ..  : .  .     .    *

MAB_3069c|M.abscessus_ATCC_199      LAGDLTRYAGPARSIGYRWFTDP---ATRSIHPVEDHQFYSRMYASGLRR
Mvan_1062|M.vanbaalenii_PYR-1       LLGDETTYRGLARSVVYRWFTDP---TSRSVYPAEDHAAIGRNYVAAARM
MSMEG_1631|M.smegmatis_MC2_155      LMEDFSALSRRDRNLIRRAFLGPDGPGGRRLYGVSDVEEFARTSAKHLRA
Mflv_5170|M.gilvum_PYR-GCK          LYPNVERVPETDRNLLWLVFTDP-----YIHELLPNWDTDSRRFLAEFRA
                                    *  :        *.:    * .*            :    .*      * 

MAB_3069c|M.abscessus_ATCC_199      VLAARGPGSKAARFAELLNAESEQFRALWKEHEVGVMPKEMKRFRHPEVG
Mvan_1062|M.vanbaalenii_PYR-1       GYTRDGAGSRAAEIVDDLLSRSDEFAELWKQHLVGTAHELDKRLVHPALG
MSMEG_1631|M.smegmatis_MC2_155      AVARYPDDPETQELVDELLAGSEEFVRLWESHDIVDRPVLCKTFVHPAVG
Mflv_5170|M.gilvum_PYR-GCK          DAGPRVGEPSYTALVSRLSSESPHFAAAWQATSIERFTSRERLFRHPAAG
                                            .    :.. * : * .*   *:   :       : : **  *

MAB_3069c|M.abscessus_ATCC_199      LLELN-CQILLDPVESTSLLVYTAVPGSESYEKLQLLAIIGASSPPGR--
Mvan_1062|M.vanbaalenii_PYR-1       VLELQ-CQILHDPAQLHTLLVFTAEPGTPSHAKLAALGADPQSYRRGRSI
MSMEG_1631|M.smegmatis_MC2_155      PVSVN-CDALDIADRDQCLVIYTAEPGSPSEEAMRLLAVLGTQQMDVPG-
Mflv_5170|M.gilvum_PYR-GCK          ELRLEHHQVAPVDVPDIQIVAYLPVPDSVASERLRMLTGQADTAR-----
                                     : ::  :          :: : . *.: :   :  *             

MAB_3069c|M.abscessus_ATCC_199      -------
Mvan_1062|M.vanbaalenii_PYR-1       NGSTVPE
MSMEG_1631|M.smegmatis_MC2_155      -------
Mflv_5170|M.gilvum_PYR-GCK          -------