For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTAAADLDVRRLTRAEQVEHLRRKMASVSAKVGSAHRGVSGSDDLISPAGDLLAGPESQDGTAPEQLPRT LPRGTVAVARGARSLTLGMVAAVTAAGGHAVIVGQPDAGLLAAVEMGADLSRLAVIPDPGADPVEVASVL MDGMDLVVLGLGGRSVPPSRTRVMTARARQKGCTLLVTDGDWQGPSARLEARVCGYEVTGAGRGEPTPGR GRIGRIRLTMRSRGRALGPVRAVGG
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_1620 | - | - | 100% (235) | hypothetical protein MSMEG_1620 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb3427c | - | 9e-68 | 63.56% (225) | hypothetical protein Mb3427c |
M. gilvum PYR-GCK | Mflv_4899 | - | 1e-77 | 65.38% (234) | hypothetical protein Mflv_4899 |
M. tuberculosis H37Rv | Rv3395c | - | 1e-68 | 64.44% (225) | hypothetical protein Rv3395c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3713c | - | 2e-53 | 51.11% (225) | hypothetical protein MAB_3713c |
M. marinum M | MMAR_1150 | - | 6e-67 | 60.68% (234) | hypothetical protein MMAR_1150 |
M. avium 104 | MAV_4346 | - | 1e-65 | 62.39% (218) | hypothetical protein MAV_4346 |
M. thermoresistible (build 8) | TH_0485 | - | 2e-80 | 70.14% (221) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_0915 | - | 1e-66 | 60.26% (234) | hypothetical protein MUL_0915 |
M. vanbaalenii PYR-1 | Mvan_1522 | - | 5e-79 | 64.49% (245) | hypothetical protein Mvan_1522 |
CLUSTAL 2.0.9 multiple sequence alignment Mb3427c|M.bovis_AF2122/97 -----------MTVAFASDQRLENGAEQLESLRRQMALLSEKVSGGPSRS Rv3395c|M.tuberculosis_H37Rv -----------MTAAFASDQRLENGAEQLESLRRQMALLSEKVSGGPSRS MMAR_1150|M.marinum_M -----------MTTALASDRRHENRAEQLESLRRQIAVLSGKPAGKAVEP MUL_0915|M.ulcerans_Agy99 MIGWKVGRRPVMTTALASDRRHENRAEQLESLRRQIAVLSGKPAGKAVEP MAV_4346|M.avium_104 -----------MTAAFASSRHEETRAERLESLRRRMAEMSGRMSGAASGA MSMEG_1620|M.smegmatis_MC2_155 -----------MTAAADLDVRRLTRAEQVEHLRRKMASVSAKVGSAHRGV TH_0485|M.thermoresistible__bu ----------------------------VEHLRRRMAAISGKVGAGHRGV Mflv_4899|M.gilvum_PYR-GCK -----------------MGRCSVTRAEQVEQLRKQMAAVSGKVGGSRRAV Mvan_1522|M.vanbaalenii_PYR-1 -----------MTTPPSLNRCPVTRAEQVEQLRKQIASVSSKVGAARRMA MAB_3713c|M.abscessus_ATCC_199 -----------MTAVAAADEALVNRADQLQKLRQQMAAISGKVGGDRSAA :: **:::* :* : .. Mb3427c|M.bovis_AF2122/97 GDLVP------------------AGP------VSLPPGTVGVLSGARSLL Rv3395c|M.tuberculosis_H37Rv GDLVP------------------AGP------VSLPPGTVGVLSGARSLL MMAR_1150|M.marinum_M SADP------------LAIPAGVAG-------VALPRGTVAVLSGARSLL MUL_0915|M.ulcerans_Agy99 SADP------------LAIPAGVAG-------VALPRGTVAVLSGARSLL MAV_4346|M.avium_104 AAPADL----LGAESLLAMPRWLAES------VRVPRGSVAVLSGARSLL MSMEG_1620|M.smegmatis_MC2_155 SGSDD---LISPAGDLLAGPESQDGTAPEQLPRTLPRGTVAVARGARSLT TH_0485|M.thermoresistible__bu GASHD---VLPQSESLLPISERPAG----QLPGPLPRGSVAVLSGARSLL Mflv_4899|M.gilvum_PYR-GCK APVPQPTPVSETPDSLLPMPDSLAE----LLPDSLPRGTVAVVSGARSLQ Mvan_1522|M.vanbaalenii_PYR-1 APVPEPAAFSGAPDSLLPRPDSLAE----LLPDSLPRGTVAVLSGARSLQ MAB_3713c|M.abscessus_ATCC_199 GHFPEA---LPDAQSLLPGSDALARS----IGHVLRRGTVAVAGGARSLP . : *:*.* ***** Mb3427c|M.bovis_AF2122/97 LSMVASVTAAGGNAAIVGQPDIGLLAAVEMGADLSRLAMIPDPGTDPVEV Rv3395c|M.tuberculosis_H37Rv LSMVASVTAAGGNAAIVGQPDIGLLAAVEMGADLSRLAVIPDPGTDPVEV MMAR_1150|M.marinum_M LNMVAAVTAAGGNAAIVGQPDIGLLAAVEMGADLSRLAVIPDPGTDPVEV MUL_0915|M.ulcerans_Agy99 LNMVAAVTAAGGNAAIVGQPDIGLLAAVEMGADLSRLTVIPDPGTDPVEV MAV_4346|M.avium_104 LSMVAAVTAAGGNAAIVGQPDIGLLAAAEMGADLSRLAVIPDPGTDPVEV MSMEG_1620|M.smegmatis_MC2_155 LGMVAAVTAAGGHAVIVGQPDAGLLAAVEMGADLSRLAVIPDPGADPVEV TH_0485|M.thermoresistible__bu LNMVAAVTADGGHAAIVGQPDVGLLAAVEMGADLSRLAVIPDPGADPVEV Mflv_4899|M.gilvum_PYR-GCK LSMVAAVTAQGGHVAIIGQPDVGLLAAAEMGADLSRVAVIPEPGADPVEV Mvan_1522|M.vanbaalenii_PYR-1 LRMVAAVTAEGGHVAIIGQPDVGLLAAVEMGADLSRIAVIPEPGADPVEV MAB_3713c|M.abscessus_ATCC_199 LEVVASVTAAGGYAAIVGMPEVSVLAAVERGADLSRLALIPRPGLSAVEV * :**:*** ** ..*:* *: .:***.* ******:::** ** ..*** Mb3427c|M.bovis_AF2122/97 AAVLIDGMDLVVLGLGGRRVTRARARAVVARARQKGCTLLVTDGDWQGVS Rv3395c|M.tuberculosis_H37Rv AAVLIDGMDLVVLGLGGRRVTRARARAVVARARQKGCTLLVTDGDWQGVS MMAR_1150|M.marinum_M AAVLVDGMDLVVLGLDGQRVSRTRARAVVARARHRGCTLLVTDGDWEGAP MUL_0915|M.ulcerans_Agy99 AAVLVDGMDLVVLGLDGQRVSRTRARAVVARARHRGCTLLVTDGDWEGAP MAV_4346|M.avium_104 AAVLVDGMDLVVLGLGGRRVPPTRARAVVARARSKGCTLLVTGGDWQGAP MSMEG_1620|M.smegmatis_MC2_155 ASVLMDGMDLVVLGLGGRSVPPSRTRVMTARARQKGCTLLVTDGDWQGPS TH_0485|M.thermoresistible__bu AAVLLDGMDLVVLGLGGRSVPPTRARAVVARARQKGCTLLVTDGDWPTAS Mflv_4899|M.gilvum_PYR-GCK AAVLMDGMDLVVLGLGGRTVPATRARSVVARARQRGCTLLVTDGDWQGAS Mvan_1522|M.vanbaalenii_PYR-1 AAVLMDGMDLVVLGLGGRTVPATRARAVVARARQRGCTLLVTGGDWQGAS MAB_3713c|M.abscessus_ATCC_199 ASVLMDGMDLVVLGLGGRQVTSTSARAIVARAHSNGCTLLAVGGDWEGAS *:**:**********.*: *. : :* :.***: .*****...*** . Mb3427c|M.bovis_AF2122/97 TRLAARVCGYEITPALRGVPTPGLGRISGVRLQINGR---GR-------- Rv3395c|M.tuberculosis_H37Rv TRLAARVCGYEITPALRGVPTPGLGRISGVRLQINGR---GR-------- MMAR_1150|M.marinum_M TRLEARVCGYEITVGNRGAPTPGFGRISAVRLQVSGIC-AGRSIG----- MUL_0915|M.ulcerans_Agy99 TRLEARVCGYEITVGNRGAPTPGFGRISAVRLQVSGIC-AGRSIG----- MAV_4346|M.avium_104 TRLAARVCGYEVTPAQWGKTAPGFGRISGVRLQVSGMC-AGRRVAA---- MSMEG_1620|M.smegmatis_MC2_155 ARLEARVCGYEVTGAGRGEPTPGRGRIGRIRLTMRSR---GRALG----P TH_0485|M.thermoresistible__bu ARLEARVCGYDLAGSGRDAPIPGCGRISRVRLAMRAR---GRTFVGAGSP Mflv_4899|M.gilvum_PYR-GCK ARLDAHVSGYEIAGGQGGVPTPGCGRIGRVRLAMRAR---GRSVG---PS Mvan_1522|M.vanbaalenii_PYR-1 ARLDARVSGYEIAGGRDGVPTPGCGRISRVRLSMRAR---GRSVG---HP MAB_3713c|M.abscessus_ATCC_199 VRLQAQITGYD------GVSACGLGRIRGVRTAVRVRGRGGREVCGSRGA .** *:: **: . . * *** :* : ** Mb3427c|M.bovis_AF2122/97 ------ Rv3395c|M.tuberculosis_H37Rv ------ MMAR_1150|M.marinum_M -RVRTG MUL_0915|M.ulcerans_Agy99 -RVRTG MAV_4346|M.avium_104 -QARAG MSMEG_1620|M.smegmatis_MC2_155 VRAVGG TH_0485|M.thermoresistible__bu ERAAGE Mflv_4899|M.gilvum_PYR-GCK ARVVGG Mvan_1522|M.vanbaalenii_PYR-1 ARAVGG MAB_3713c|M.abscessus_ATCC_199 IRSA--