For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTTALASDRRHENRAEQLESLRRQIAVLSGKPAGKAVEPSADPLAIPAGVAGVALPRGTVAVLSGARSLL LNMVAAVTAAGGNAAIVGQPDIGLLAAVEMGADLSRLAVIPDPGTDPVEVAAVLVDGMDLVVLGLDGQRV SRTRARAVVARARHRGCTLLVTDGDWEGAPTRLEARVCGYEITVGNRGAPTPGFGRISAVRLQVSGICAG RSIGRVRTG
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_1150 | - | - | 100% (219) | hypothetical protein MMAR_1150 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3427c | - | 8e-81 | 76.70% (206) | hypothetical protein Mb3427c |
| M. gilvum PYR-GCK | Mflv_4899 | - | 5e-67 | 63.89% (216) | hypothetical protein Mflv_4899 |
| M. tuberculosis H37Rv | Rv3395c | - | 4e-81 | 77.18% (206) | hypothetical protein Rv3395c |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3713c | - | 3e-52 | 53.24% (216) | hypothetical protein MAB_3713c |
| M. avium 104 | MAV_4346 | - | 1e-81 | 72.52% (222) | hypothetical protein MAV_4346 |
| M. smegmatis MC2 155 | MSMEG_1620 | - | 6e-67 | 60.68% (234) | hypothetical protein MSMEG_1620 |
| M. thermoresistible (build 8) | TH_0485 | - | 1e-65 | 65.89% (214) | CONSERVED HYPOTHETICAL PROTEIN |
| M. ulcerans Agy99 | MUL_0915 | - | 1e-119 | 99.54% (219) | hypothetical protein MUL_0915 |
| M. vanbaalenii PYR-1 | Mvan_1522 | - | 1e-67 | 61.90% (231) | hypothetical protein Mvan_1522 |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_1150|M.marinum_M -----------MTTALASDRRHENRAEQLESLRRQIAVLSGKPAGKAVEP
MUL_0915|M.ulcerans_Agy99 MIGWKVGRRPVMTTALASDRRHENRAEQLESLRRQIAVLSGKPAGKAVEP
MAV_4346|M.avium_104 -----------MTAAFASSRHEETRAERLESLRRRMAEMSGRMSGAASGA
Mb3427c|M.bovis_AF2122/97 -----------MTVAFASDQRLENGAEQLESLRRQMALLSEKVSGGPSRS
Rv3395c|M.tuberculosis_H37Rv -----------MTAAFASDQRLENGAEQLESLRRQMALLSEKVSGGPSRS
MSMEG_1620|M.smegmatis_MC2_155 -----------MTAAADLDVRRLTRAEQVEHLRRKMASVSAKVGSAHRGV
TH_0485|M.thermoresistible__bu ----------------------------VEHLRRRMAAISGKVGAGHRGV
Mflv_4899|M.gilvum_PYR-GCK -----------------MGRCSVTRAEQVEQLRKQMAAVSGKVGGSRRAV
Mvan_1522|M.vanbaalenii_PYR-1 -----------MTTPPSLNRCPVTRAEQVEQLRKQIASVSSKVGAARRMA
MAB_3713c|M.abscessus_ATCC_199 -----------MTAVAAADEALVNRADQLQKLRQQMAAISGKVGGDRSAA
:: **:::* :* : ..
MMAR_1150|M.marinum_M SADP------------LAIPAGVAG-------VALPRGTVAVLSGARSLL
MUL_0915|M.ulcerans_Agy99 SADP------------LAIPAGVAG-------VALPRGTVAVLSGARSLL
MAV_4346|M.avium_104 AAPADL----LGAESLLAMPRWLAES------VRVPRGSVAVLSGARSLL
Mb3427c|M.bovis_AF2122/97 GDLVP------------------AGP------VSLPPGTVGVLSGARSLL
Rv3395c|M.tuberculosis_H37Rv GDLVP------------------AGP------VSLPPGTVGVLSGARSLL
MSMEG_1620|M.smegmatis_MC2_155 SGSDD---LISPAGDLLAGPESQDGTAPEQLPRTLPRGTVAVARGARSLT
TH_0485|M.thermoresistible__bu GASHD---VLPQSESLLPISERPAG----QLPGPLPRGSVAVLSGARSLL
Mflv_4899|M.gilvum_PYR-GCK APVPQPTPVSETPDSLLPMPDSLAE----LLPDSLPRGTVAVVSGARSLQ
Mvan_1522|M.vanbaalenii_PYR-1 APVPEPAAFSGAPDSLLPRPDSLAE----LLPDSLPRGTVAVLSGARSLQ
MAB_3713c|M.abscessus_ATCC_199 GHFPEA---LPDAQSLLPGSDALARS----IGHVLRRGTVAVAGGARSLP
. : *:*.* *****
MMAR_1150|M.marinum_M LNMVAAVTAAGGNAAIVGQPDIGLLAAVEMGADLSRLAVIPDPGTDPVEV
MUL_0915|M.ulcerans_Agy99 LNMVAAVTAAGGNAAIVGQPDIGLLAAVEMGADLSRLTVIPDPGTDPVEV
MAV_4346|M.avium_104 LSMVAAVTAAGGNAAIVGQPDIGLLAAAEMGADLSRLAVIPDPGTDPVEV
Mb3427c|M.bovis_AF2122/97 LSMVASVTAAGGNAAIVGQPDIGLLAAVEMGADLSRLAMIPDPGTDPVEV
Rv3395c|M.tuberculosis_H37Rv LSMVASVTAAGGNAAIVGQPDIGLLAAVEMGADLSRLAVIPDPGTDPVEV
MSMEG_1620|M.smegmatis_MC2_155 LGMVAAVTAAGGHAVIVGQPDAGLLAAVEMGADLSRLAVIPDPGADPVEV
TH_0485|M.thermoresistible__bu LNMVAAVTADGGHAAIVGQPDVGLLAAVEMGADLSRLAVIPDPGADPVEV
Mflv_4899|M.gilvum_PYR-GCK LSMVAAVTAQGGHVAIIGQPDVGLLAAAEMGADLSRVAVIPEPGADPVEV
Mvan_1522|M.vanbaalenii_PYR-1 LRMVAAVTAEGGHVAIIGQPDVGLLAAVEMGADLSRIAVIPEPGADPVEV
MAB_3713c|M.abscessus_ATCC_199 LEVVASVTAAGGYAAIVGMPEVSVLAAVERGADLSRLALIPRPGLSAVEV
* :**:*** ** ..*:* *: .:***.* ******:::** ** ..***
MMAR_1150|M.marinum_M AAVLVDGMDLVVLGLDGQRVSRTRARAVVARARHRGCTLLVTDGDWEGAP
MUL_0915|M.ulcerans_Agy99 AAVLVDGMDLVVLGLDGQRVSRTRARAVVARARHRGCTLLVTDGDWEGAP
MAV_4346|M.avium_104 AAVLVDGMDLVVLGLGGRRVPPTRARAVVARARSKGCTLLVTGGDWQGAP
Mb3427c|M.bovis_AF2122/97 AAVLIDGMDLVVLGLGGRRVTRARARAVVARARQKGCTLLVTDGDWQGVS
Rv3395c|M.tuberculosis_H37Rv AAVLIDGMDLVVLGLGGRRVTRARARAVVARARQKGCTLLVTDGDWQGVS
MSMEG_1620|M.smegmatis_MC2_155 ASVLMDGMDLVVLGLGGRSVPPSRTRVMTARARQKGCTLLVTDGDWQGPS
TH_0485|M.thermoresistible__bu AAVLLDGMDLVVLGLGGRSVPPTRARAVVARARQKGCTLLVTDGDWPTAS
Mflv_4899|M.gilvum_PYR-GCK AAVLMDGMDLVVLGLGGRTVPATRARSVVARARQRGCTLLVTDGDWQGAS
Mvan_1522|M.vanbaalenii_PYR-1 AAVLMDGMDLVVLGLGGRTVPATRARAVVARARQRGCTLLVTGGDWQGAS
MAB_3713c|M.abscessus_ATCC_199 ASVLMDGMDLVVLGLGGRQVTSTSARAIVARAHSNGCTLLAVGGDWEGAS
*:**:**********.*: *. : :* :.***: .*****...*** .
MMAR_1150|M.marinum_M TRLEARVCGYEITVGNRGAPTPGFGRISAVRLQVSGIC-AGRSIG-----
MUL_0915|M.ulcerans_Agy99 TRLEARVCGYEITVGNRGAPTPGFGRISAVRLQVSGIC-AGRSIG-----
MAV_4346|M.avium_104 TRLAARVCGYEVTPAQWGKTAPGFGRISGVRLQVSGMC-AGRRVAA----
Mb3427c|M.bovis_AF2122/97 TRLAARVCGYEITPALRGVPTPGLGRISGVRLQINGR---GR--------
Rv3395c|M.tuberculosis_H37Rv TRLAARVCGYEITPALRGVPTPGLGRISGVRLQINGR---GR--------
MSMEG_1620|M.smegmatis_MC2_155 ARLEARVCGYEVTGAGRGEPTPGRGRIGRIRLTMRSR---GRALG----P
TH_0485|M.thermoresistible__bu ARLEARVCGYDLAGSGRDAPIPGCGRISRVRLAMRAR---GRTFVGAGSP
Mflv_4899|M.gilvum_PYR-GCK ARLDAHVSGYEIAGGQGGVPTPGCGRIGRVRLAMRAR---GRSVG---PS
Mvan_1522|M.vanbaalenii_PYR-1 ARLDARVSGYEIAGGRDGVPTPGCGRISRVRLSMRAR---GRSVG---HP
MAB_3713c|M.abscessus_ATCC_199 VRLQAQITGYD------GVSACGLGRIRGVRTAVRVRGRGGREVCGSRGA
.** *:: **: . . * *** :* : **
MMAR_1150|M.marinum_M -RVRTG
MUL_0915|M.ulcerans_Agy99 -RVRTG
MAV_4346|M.avium_104 -QARAG
Mb3427c|M.bovis_AF2122/97 ------
Rv3395c|M.tuberculosis_H37Rv ------
MSMEG_1620|M.smegmatis_MC2_155 VRAVGG
TH_0485|M.thermoresistible__bu ERAAGE
Mflv_4899|M.gilvum_PYR-GCK ARVVGG
Mvan_1522|M.vanbaalenii_PYR-1 ARAVGG
MAB_3713c|M.abscessus_ATCC_199 IRSA--