For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VIMSAQSTQAQRTLELVGDSPAEPGKRSDEVVLAVSPAFADFFSQTIIGLSHADVIREILAGIEEQEVHA RCIRVRHSSDLAVLAHTAAKLSGSGIGIGILSRGTSMIHQRDLPRLSSLELFPQSPLMTLETYRSIGSNA AQYAKGESPEPVPTLNDQMARPRWQAKAALLHLKETEQVVKQAKPVEVVPQFGVAEALGT
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_1548 | - | - | 100% (200) | propanediol utilization: dehydratase, medium subunit |
| M. smegmatis MC2 155 | MSMEG_0497 | - | 3e-31 | 40.78% (179) | glycerol dehydratase large subunit |
| M. smegmatis MC2 155 | MSMEG_6321 | - | 2e-30 | 42.01% (169) | glycerol dehydratase large subunit |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_1245 | - | 8e-31 | 42.01% (169) | glycerol dehydratase |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_5563 | - | 2e-32 | 42.11% (190) | glycerol dehydratase |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_1245|M.gilvum_PYR-GCK MADELGRFRVLNSKPVNLDGFSVPDAALGLVAMSSPHDPAPSLVIRDGAV
Mvan_5563|M.vanbaalenii_PYR-1 MADELGRFRVLNSKPVNLDGFSVPDAGLGLVAMSSPHDPAPSLKIRGGEV
MSMEG_1548|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_1245|M.gilvum_PYR-GCK VELDSKDVAEFDVIDEFIARYGIDLSVAEEAMALDDETLARMVVDINVPR
Mvan_5563|M.vanbaalenii_PYR-1 VELDGKGAGEFDVIDEFIARYGIDLTVAEEAMALGDETLARMVVDINVPR
MSMEG_1548|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_1245|M.gilvum_PYR-GCK AGVVRLIGGTTPAKLARVVALLSPVEMQMAMVKMRARRTPSNQAHVTNQL
Mvan_5563|M.vanbaalenii_PYR-1 AEVVRLIGGTTPAKLARVVALLSPVEMQMAMAKMRARRTPSNQAHVTNQL
MSMEG_1548|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_1245|M.gilvum_PYR-GCK DDPLLIAADAASAVAYGFREVETTVPVLGDAPSNAVALLIGSQVGTPGAM
Mvan_5563|M.vanbaalenii_PYR-1 DDPLLIAADAASAVAYGFREVETTVPVLGDAPSNAVALLIGSQVGSPGAM
MSMEG_1548|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_1245|M.gilvum_PYR-GCK AQCSIEEALELRLGLRGLTSYAETISIYGTEQVFIDGDDTPFSKAILTSA
Mvan_5563|M.vanbaalenii_PYR-1 AQCSIEEALELRLGLRGLTSYAETISIYGTEQVFVDGDDTPFSKAILTSA
MSMEG_1548|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_1245|M.gilvum_PYR-GCK YASRGLKMRVTSGGGAEVLMGAAQKCSILYLESRCVSLARALGSQGVQNG
Mvan_5563|M.vanbaalenii_PYR-1 YASRGLKMRVTSGGGAEVLMGAAEKCSILYLESRCVSLARALGSQGVQNG
MSMEG_1548|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_1245|M.gilvum_PYR-GCK GIDGVGVVASVPEGMKELLAENLMVMMRDLESCAGNDNLISESDIRRSAH
Mvan_5563|M.vanbaalenii_PYR-1 GIDGVGVVASVPEGMKELLAENLMVMMRDLESCAGNDNLISESDIRRSAH
MSMEG_1548|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_1245|M.gilvum_PYR-GCK TLPVLLAGADFIFSGFGSIPRYDNAFALSNFNSDDMDDFLVLQRDWGADG
Mvan_5563|M.vanbaalenii_PYR-1 TLPVLLAGADFVFSGFGSIPRYDNAFALSNFNSDDMDDFLVLQRDWGADG
MSMEG_1548|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_1245|M.gilvum_PYR-GCK GLRTVSPEHLEAVRRRAAQAVQAVYRDLGLADYDDARVEDVVAANGSRDL
Mvan_5563|M.vanbaalenii_PYR-1 GLRTVSPEHLEAVRRRAAKAVQAVYRDLGLADYEDARVEEVVAANGSRDL
MSMEG_1548|M.smegmatis_MC2_155 --------------------------------------------------
Mflv_1245|M.gilvum_PYR-GCK PAGHPKMVAEAAASIEARQLTVFDVIAALHRTGFTEEAEAITTLTRERLR
Mvan_5563|M.vanbaalenii_PYR-1 PAGHPKMVAEAAASIEARQLTVFDVIASLHRTGFTDEAEAITTLTRERLR
MSMEG_1548|M.smegmatis_MC2_155 ------------------------MIMSAQST------------------
:* : : *
Mflv_1245|M.gilvum_PYR-GCK GDQLQTSAIFDEQFRVFSKLTDPNDYRGPATGYALTEQRRAEIDAIRQAR
Mvan_5563|M.vanbaalenii_PYR-1 GDQLQTSAIFDEKFRVLSKLTDPNDYTGPATGYALTDRRRAEIDAIRQAR
MSMEG_1548|M.smegmatis_MC2_155 -----------------------------------------------QAQ
**:
Mflv_1245|M.gilvum_PYR-GCK SGAELTVDQEEHRGHVVVTDVEPAHQGSDPREVCIGLSPAWGRSVWLTLC
Mvan_5563|M.vanbaalenii_PYR-1 SSAELTADQESYRGHVLVTDVEPAQQGSDPREVCIGLSPAWGRSVWLTLC
MSMEG_1548|M.smegmatis_MC2_155 RTLELVGDS-------------PAEPGKRSDEVVLAVSPAFADFFSQTII
**. *. **. *. . ** :.:***:. . *:
Mflv_1245|M.gilvum_PYR-GCK GLTVGEVLRQIAAGLEEEGCIARTVRVCSTIDTGLIGLTAARLSGSGIGI
Mvan_5563|M.vanbaalenii_PYR-1 GLTIGEVLRQISAGLEEEGCIARPVRVRSTIDVGLIGLTAARLSGSGIGI
MSMEG_1548|M.smegmatis_MC2_155 GLSHADVIREILAGIEEQEVHARCIRVRHSSDLAVLAHTAAKLSGSGIGI
**: .:*:*:* **:**: ** :** : * .::. ***:********
Mflv_1245|M.gilvum_PYR-GCK GLQGKGTALIHRRDLAPLANLELFSVAPLLTAKMYRELGKNAARHAKGMA
Mvan_5563|M.vanbaalenii_PYR-1 GLQGKGTALIHRRDLAPLANLELFSVAPLLTAKMYRELGKNAARHAKGMA
MSMEG_1548|M.smegmatis_MC2_155 GILSRGTSMIHQRDLPRLSSLELFPQSPLMTLETYRSIGSNAAQYAKGES
*: .:**::**:***. *:.****. :**:* : **.:*.***::*** :
Mflv_1245|M.gilvum_PYR-GCK PVPIFTGGTDESISARYHARAVALVALERDACEPGRAPVTVKVEAR----
Mvan_5563|M.vanbaalenii_PYR-1 PVPIFTGGTDESISARYHARAVALVALERESCEPGQPPVTVKVEWP----
MSMEG_1548|M.smegmatis_MC2_155 PEPVPT-LNDQMARPRWQAKAALLHLKETEQVVKQAKPVEVVPQFGVAEA
* *: * .*: .*::*:*. * * : ** * :
Mflv_1245|M.gilvum_PYR-GCK ---
Mvan_5563|M.vanbaalenii_PYR-1 ---
MSMEG_1548|M.smegmatis_MC2_155 LGT