For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VAVHSIIGDWKLWLGFLLVAIPVCLSPGAGAIQSMSSGLTHGLVRSYWSIAGQELGLIAQLTVVAVGLGA VVAGSAAAFAVIKVIGVVYLLYLAVRQWRSAGTDVRDTVGRPTARAGIPLLARGFLVNATNPKALVFYLA VLPQFLQPKSPLLPQYVAIGATFVLVDIVVMSMYAGLAARLLSALGARQQRILNRSFSGLFATAAVLVAL VRRGAA
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_1478 | - | - | 100% (216) | transporter, LysE family protein |
| M. smegmatis MC2 155 | MSMEG_3203 | - | 5e-71 | 63.46% (208) | transporter, LysE family protein |
| M. smegmatis MC2 155 | MSMEG_3364 | - | 5e-09 | 24.74% (194) | RhtB family protein transporter |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_3615 | - | 4e-66 | 61.65% (206) | lysine exporter protein LysE/YggA |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3913 | - | 6e-21 | 32.93% (167) | putative translocator |
| M. marinum M | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | - | - | - | - | - |
| M. vanbaalenii PYR-1 | Mvan_2802 | - | 8e-68 | 62.02% (208) | lysine exporter protein LysE/YggA |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_3615|M.gilvum_PYR-GCK -----------MWLAFFGAAVVIAVSPGAGAIQSMATGLTHGVTRGYWSI
Mvan_2802|M.vanbaalenii_PYR-1 -------MTWQMWLAFVGAAILIAVSPGAGAIQSMATGMTHGVKRGYWSI
MSMEG_1478|M.smegmatis_MC2_155 MAVHSIIGDWKLWLGFLLVAIPVCLSPGAGAIQSMSSGLTHGLVRSYWSI
MAB_3913|M.abscessus_ATCC_1997 ---MLPAVSPTHLIGFAVAAYALIVIPGPSVLFAVGRSLSLGRRSGLVTV
:.* .* : : **...: ::. .:: * . ::
Mflv_3615|M.gilvum_PYR-GCK VGLEAGLMLQLTLVAVGLGAAVANSVLAFTVIKWLGVVYLAYLAWRQWRS
Mvan_2802|M.vanbaalenii_PYR-1 VGLEIGLMLQLTLVAIGLGAAVANSILAFTVIKWIGVAYLAYLAVRQWRT
MSMEG_1478|M.smegmatis_MC2_155 AGQELGLIAQLTVVAVGLGAVVAGSAAAFAVIKVIGVVYLLYLAVRQWRS
MAB_3913|M.abscessus_ATCC_1997 LGNTTGTVVPLVLTTAGLGAVLAASTWALTVVKLVGAAYLIYLGAQAIRN
* * : *.:.: ****.:* * *::*:* :*..** **. : *.
Mflv_3615|M.gilvum_PYR-GCK VAVDLHSQVDRGMDGGRVSLMVRGFLVNATNPKGLLFFLAVMPQFVNPAA
Mvan_2802|M.vanbaalenii_PYR-1 AAIDLNAEVDRDVDGGRASLLVRGFLVNATNPKGLLFFLAVMPQFVVPTT
MSMEG_1478|M.smegmatis_MC2_155 AGTDVRDTVGRPTARAGIPLLARGFLVNATNPKALVFYLAVLPQFLQPKS
MAB_3913|M.abscessus_ATCC_1997 RKSLVTALDAAAPAVGSQRVFRQGFVVGMTNPKTALFFAAVLPQFADPAV
: . :: :**:*. **** :*: **:*** *
Mflv_3615|M.gilvum_PYR-GCK -PLLAQYLAIGVTMVAVDVVVMGFYTALSVRLLTWLRTPRQQMTLNRVFS
Mvan_2802|M.vanbaalenii_PYR-1 -PLLPQYLAIGVTMVAVDMVVMGLYTGLAVRLLTWLRTPRQHTMLSRVFS
MSMEG_1478|M.smegmatis_MC2_155 -PLLPQYVAIGATFVLVDIVVMSMYAGLAARLLSALG-ARQQRILNRSFS
MAB_3913|M.abscessus_ATCC_1997 GSVPMQMAVFGAIFVLIALVSDSVWAVLASTARNWFARSPKRLEAVGATG
.: * .:*. :* : :* ..:: *: . : . :: .
Mflv_3615|M.gilvum_PYR-GCK GLFATAAVVLALVRRGPAAA
Mvan_2802|M.vanbaalenii_PYR-1 GLFAAAAVVLALVRRGPAAA
MSMEG_1478|M.smegmatis_MC2_155 GLFATAAVLVALVRRGAA--
MAB_3913|M.abscessus_ATCC_1997 GWMIVGLGAGVAVSSP----
* : .. . *