For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VSVIKLHDLKPAPGEKKAKTRVGRGEGSKGKTAGRGTKGTKARKNVPVMFEGGQMPIHMRLPKLKGFKNR FRTEYQVVNVGDINKAFPQGGTVGVDELVAKGLVRKNSLVKVLGDGKLTVKVDVTANKFSGSAREAITAA GGSATEL
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_1474 | rplO | - | 100% (147) | 50S ribosomal protein L15 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb0744 | rplO | 3e-67 | 83.33% (144) | 50S ribosomal protein L15 |
M. gilvum PYR-GCK | Mflv_5028 | rplO | 9e-73 | 90.97% (144) | 50S ribosomal protein L15 |
M. tuberculosis H37Rv | Rv0723 | rplO | 5e-67 | 83.33% (144) | 50S ribosomal protein L15 |
M. leprae Br4923 | MLBr_01840 | rplO | 3e-62 | 77.78% (144) | 50S ribosomal protein L15 |
M. abscessus ATCC 19977 | MAB_3793c | rplO | 3e-62 | 79.86% (144) | 50S ribosomal protein L15 |
M. marinum M | MMAR_1054 | rplO | 3e-69 | 86.81% (144) | 50S ribosomal protein L15, RplO |
M. avium 104 | MAV_4446 | rplO | 3e-69 | 86.81% (144) | 50S ribosomal protein L15 |
M. thermoresistible (build 8) | TH_0304 | rplO | 9e-68 | 85.52% (145) | PROBABLE 50S RIBOSOMAL PROTEIN L15 RPLO |
M. ulcerans Agy99 | MUL_0813 | rplO | 3e-69 | 86.11% (144) | 50S ribosomal protein L15 |
M. vanbaalenii PYR-1 | Mvan_1341 | rplO | 3e-72 | 91.67% (144) | 50S ribosomal protein L15 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_5028|M.gilvum_PYR-GCK MSDPIKLHDLRPAPGEKTKKTRVGRGEGS-KGKTAGRGTKGTKARKNVPV Mvan_1341|M.vanbaalenii_PYR-1 -MDPIKLHDLRPAPGEKKAKTRVGRGEGS-KGKTAGRGTKGTKARKNVPV MSMEG_1474|M.smegmatis_MC2_155 -MSVIKLHDLKPAPGEKKAKTRVGRGEGS-KGKTAGRGTKGTKARKNVPV TH_0304|M.thermoresistible__bu --MTIKLHDLRPAAGSKTSKTRVGRGDGSGRGKTAGRGTKGTKARKNVPV MMAR_1054|M.marinum_M --MTIKLHDLRPAPGSKTPRTRVGRGEGS-KGKTAGRGTKGTKARKQVPT MUL_0813|M.ulcerans_Agy99 --MTIKLHDLRPAPGSKTPRTRVGRGEGS-KGKTAGRGTKGTKARKQVPT Mb0744|M.bovis_AF2122/97 --MTLKLHDLRPARGSKTARTRVGRGDGS-KGKTAGRGTKGTRARKQVPV Rv0723|M.tuberculosis_H37Rv --MTLKLHDLRPARGSKIARTRVGRGDGS-KGKTAGRGTKGTRARKQVPV MAV_4446|M.avium_104 --MTIKLHDLKPARGSKTPRTRVGRGEGS-KGKTAGRGTKGTKARKNVPV MLBr_01840|M.leprae_Br4923 --MTIKLHDLQPARGSKTTRTRVGRGEAS-KGKTAGRGTKGTKARKQVPV MAB_3793c|M.abscessus_ATCC_199 --MTIKLHHLRPAPGSKTERTRVGRGEGS-KGKTAGRGTKGTKARKNVPV :***.*:** *.* :******:.* :***********:***:**. Mflv_5028|M.gilvum_PYR-GCK MFEGGQMPIHMRLPKLKGFRNRFRTEYGVVNVGDLNKAFPEGGTVGVDEL Mvan_1341|M.vanbaalenii_PYR-1 TFEGGQMPIHMRLPKLKGFRNRFRTEYAPVNVGDIAKAFPEGGTVGVDEL MSMEG_1474|M.smegmatis_MC2_155 MFEGGQMPIHMRLPKLKGFKNRFRTEYQVVNVGDINKAFPQGGTVGVDEL TH_0304|M.thermoresistible__bu TFEGGQMPIHMRLPKLRGFRNRFRTEYAVVNVGDINRLFPEGGQVGIDEL MMAR_1054|M.marinum_M TFEGGQMPIHMRLPKLKGFRNRFRTEYEIVNVGDIARLFPEGGTVGVDEL MUL_0813|M.ulcerans_Agy99 TFEGGQMPIHMRLPKLKGFRNRFRTEYEIVNVGDIARLFPEGGTVGVDEL Mb0744|M.bovis_AF2122/97 TFEGGQMPIHMRLPKLKGFRNRFRTEYEIVNVGDINRLFPQGGAVGVDDL Rv0723|M.tuberculosis_H37Rv TFEGGQMPIHMRLPKLKGFRNRFRTEYEIVNVGDINRLFPQGGAVGVDDL MAV_4446|M.avium_104 TFEGGQMPIHMRLPKLKGFRNRFRTEYEIVNVGDINRLFPQGGSVGVDEL MLBr_01840|M.leprae_Br4923 TFEGGQMPIHMRLPKLKGFRNRLRTEYAVVNVGDISRLFPEGGTISVNDL MAB_3793c|M.abscessus_ATCC_199 TFEGGQMPIHMRLPKLKGFKNRFRTEYQVVNVADIERLFPEGGDVTIEAL ***************:**:**:**** ***.*: : **:** : :: * Mflv_5028|M.gilvum_PYR-GCK VAKGLVRKNVLVKVLGDGKLSAKVDITAHKFSGSAREAITAAGGSVTEL- Mvan_1341|M.vanbaalenii_PYR-1 VAKGLVRKNVLVKVLGDGKLSAKVDVTAHKFSGSAREAITAAGGTATEL- MSMEG_1474|M.smegmatis_MC2_155 VAKGLVRKNSLVKVLGDGKLTVKVDVTANKFSGSAREAITAAGGSATEL- TH_0304|M.thermoresistible__bu VAKGAVRKNTLVKVLGDGKLTVKVDVTAHKFSGSAREKITAAGGSATELS MMAR_1054|M.marinum_M VAKGAVRKNSLVKVLGDGKLTVKVDVTAHKFSGSAREQITAAGGSVTEL- MUL_0813|M.ulcerans_Agy99 VAKGAVRKNSLVKVLGDGKLTVKVDITAHKFSGSAREQITAAGGSVTEL- Mb0744|M.bovis_AF2122/97 VAKGAVRKNALVKVLGDGKLTAKVDVSAHKFSGSARAKITAAGGSATEL- Rv0723|M.tuberculosis_H37Rv VAKGAVRKNALVKVLGDGKLTAKVDVSAHKFSGSARAKITAAGGSATEL- MAV_4446|M.avium_104 VAKGAVRRNSLVKVLGDGKLTVKVEVSAHKFSGSAREKITAAGGSVTEL- MLBr_01840|M.leprae_Br4923 VAKKAIRKNSLVKILGDGKLTVKVTLSAHKFSGSARHKITVAGGSVTEL- MAB_3793c|M.abscessus_ATCC_199 VAKGAVRKNELVKVLGNGDLKVKVSVSANKFSDSAREKITAAGGSINEV- *** :*:* ***:**:*.*..** ::*:***.*** **.***: .*: