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M. smegmatis MC2 155 MSMEG_1374 (-)

VNRKRLMLAAGVVALALPMAACTSSKPQADESSETPAAAGEAPAAAVTTVTAPPKASKNYNIAFLQGVVG
DQFYITMQCGAQEEAANLGVTVNTQGPQKFDPTLQKPILDSIVASKPDALLVAPTDVQAMQMPLEQAAAA
GIKVVLVDTTTNDPSYAVSAIASDNEGGGRAAFEAIKQLHPEGGKVMVMGLDPGISTTDARTKGFEEAVA
EDPGFTYVGVQYSHNDPATAAQLIGAQLQRDPDLVGVFAANLFTAEGSATGIKQAGKSEQVAVVGFDAGP
NQIQALREGTVQALVAQDPGTIGKFGVDEAVTALEGGENSPNVQTGFTIITRENLDGEGGAAAYKSSC

Operon Prediction Model: Genebank

Paralogs

species	id	gene	e-value	identity (len)	annotation
M. smegmatis MC2 155	MSMEG_1374	-	-	100% (348)	ribose ABC transporter, periplasmic binding protein
M. smegmatis MC2 155	MSMEG_3095	-	4e-19	27.15% (291)	D-ribose-binding periplasmic protein
M. smegmatis MC2 155	MSMEG_6804	-	3e-15	23.47% (311)	sugar ABC transporter substrate-binding protein

Closest Orthologs (e-value cutoff: 1e-4)

species	id	gene	e-value	identity (len)	annotation
M. bovis AF2122 / 97	-	-	-	-	-
M. gilvum PYR-GCK	Mflv_4578	-	9e-11	22.91% (275)	ABC sugar transporter, periplasmic ligand binding protein
M. tuberculosis H37Rv	-	-	-	-	-
M. leprae Br4923	MLBr_00398	-	5e-09	25.23% (218)	putative D-ribose-binding protein
M. abscessus ATCC 19977	-	-	-	-	-
M. marinum M	-	-	-	-	-
M. avium 104	-	-	-	-	-
M. thermoresistible (build 8)	-	-	-	-	-
M. ulcerans Agy99	-	-	-	-	-
M. vanbaalenii PYR-1	Mvan_4011	-	6e-11	23.75% (341)	periplasmic binding protein/LacI transcriptional regulator

CLUSTAL 2.0.9 multiple sequence alignment


MSMEG_1374|M.smegmatis_MC2_155      -MNRKRLMLAAGVVALALPMAACTSSKPQADESSETPAAAGEAPAAAVTT
Mvan_4011|M.vanbaalenii_PYR-1       -MTFKRLAAFAGAGVLAMGIVSCSSTGGAPEQSGDGGGGG---------T
MLBr_00398|M.leprae_Br4923          MSTGTSVPLRVASIMLILGLLPAILPACGFSESHHKLTIG----------
Mflv_4578|M.gilvum_PYR-GCK          -MRRSRTALLGAVGVTMSLVAASAGAANASPDAGDVTMVN----------
                                        .      .       : ..  .     :: .               

MSMEG_1374|M.smegmatis_MC2_155      VTAPPKASKNYNIAFLQGVVGDQFYITMQCGAQEEAANLGVTVNTQGPQK
Mvan_4011|M.vanbaalenii_PYR-1       VDTP----RMTIAMITHEVPGDSFWDLVRKGAEAAAKKDNIELRYSNDP-
MLBr_00398|M.leprae_Br4923          --------------VSYPTANSPFWNAYTRFIDEGSHQLGVYINAVSAEE
Mflv_4578|M.gilvum_PYR-GCK          ---------------VVKVEGIPWFNRMAVGVENFASRTGVHASQVGADD
                                                      . .  ::       :  : . .:     .   

MSMEG_1374|M.smegmatis_MC2_155      FDPTLQKPILDSIVASKPDALLVAPTDVQAMQMPLEQAAAAGIKVVLVDT
Mvan_4011|M.vanbaalenii_PYR-1       -EAPNQANLVQSAIDSNVDGIAVTLAKPDAMQAAVKSAESKGIPVVAFNA
MLBr_00398|M.leprae_Br4923          -DEQKQLSDVETLINQGIDGLIVTPQSTSIAPTLLRIATQANIPVVVVDR
Mflv_4578|M.gilvum_PYR-GCK          TSAQKQVQLIADLIPRRPTAITVVPNSVDALEDVLGQARAQGITVVSHEA
                                     .   *   :   :     .: *.  . .     :  *   .* **  : 

MSMEG_1374|M.smegmatis_MC2_155      TT---NDPSYAVSAIASDNEGGGRAAFEAIKQLHPEGG-KVMVMGLDPGI
Mvan_4011|M.vanbaalenii_PYR-1       G----MDSWKAMGVKEYFGQDGRIAGQGVGDRLRAEGATKSICVIQEQGH
MLBr_00398|M.leprae_Br4923          YPGYAPGQNKNADYVAFLGPNNEKAGSGIAEALMAGGGSKFLALGGMPGN
Mflv_4578|M.gilvum_PYR-GCK          TG----IRNADIDIEAFDNAAFGRQTMQSLAQCMEGQGEYVQFVGSVAMT
                                                .     .                  .     :      

MSMEG_1374|M.smegmatis_MC2_155      STTDARTKGFEEAVAED----PGFTYVGVQYSHNDPATAAQLIGAQLQRD
Mvan_4011|M.vanbaalenii_PYR-1       VDLEARCAGVKETFPAT----EILNVNG-----KDMPSVESTITAKLQQD
MLBr_00398|M.leprae_Br4923          SVAQGRKAGLESALTAVGHRLVQFQYAG---DSEDKGLAAAENMLQAHPA
Mflv_4578|M.gilvum_PYR-GCK          THMQWVDAAHDMQLAEFP---SMTRIEGPVETANDEPTAYARATELLVKY
                                       :    . .  ..            *     :*   .           

MSMEG_1374|M.smegmatis_MC2_155      PDLVGVFAANLFTAEGSATGIKQAGKSEQVAVVGFDAGPNQIQALREGTV
Mvan_4011|M.vanbaalenii_PYR-1       PSIDYVVTLGAPFALTAVQSAKNAGSSAKIG--TFDTNAALVEAIQNGDV
MLBr_00398|M.leprae_Br4923          GDANAIWCFNDKLCQGAIKAVYNANREKEFIFGGMDLTPQAIAAIENGLY
Mflv_4578|M.gilvum_PYR-GCK          PNLKGFQGAASTDVPGIARAVRDAGLQDRTCVMGTAVPSVASTFFADGSI
                                     .   .             .  :*. . .         .     : :*  

MSMEG_1374|M.smegmatis_MC2_155      QALVAQDPGTIGKFGVDEAVTALEGG---ENSPNVQTGFTIITRENLDGE
Mvan_4011|M.vanbaalenii_PYR-1       QWAVDQQPYLQGYLAVDSLWLYLSNGNVIGGGQPTLTGPAFIDKSNIDAV
MLBr_00398|M.leprae_Br4923          TVSLG-AHWLEGGFGLAILYRKIHGQD--PAERMVKLDLLKVDKSNVAKF
Mflv_4578|M.gilvum_PYR-GCK          DKIFFWDPAMAAEAQLQIALMLVQGEKIETGTDLNVPGYDSLTK--LDGY
                                       .       .   :      : .            .   : :  :   

MSMEG_1374|M.smegmatis_MC2_155      GGAAAYKSSC----------------
Mvan_4011|M.vanbaalenii_PYR-1       AEYAKGGTR-----------------
MLBr_00398|M.leprae_Br4923          KARYIDNTPHYNWKSTTPFDMTITLN
Mflv_4578|M.gilvum_PYR-GCK          DNVFVGNAALEADANTISQNQF----
                                           :