For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VIITYPARWRASTVALCVAAAAVTATALAAPARADQYDFVSMFDNEGVYYSSITDVIDQGKMVCRMLRNG AGMPAPLDYAAGGGYAPYETAVVVASPAMHMCPDVLPTVRAFLGGGSATGA
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. smegmatis MC2 155 | MSMEG_1251 | - | - | 100% (121) | hypothetical protein MSMEG_1251 |
| M. smegmatis MC2 155 | MSMEG_1273 | - | 8e-19 | 43.81% (105) | hypothetical protein MSMEG_1273 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_2012 | - | 2e-06 | 30.85% (94) | hypothetical protein Mflv_2012 |
| M. tuberculosis H37Rv | Rv3354 | - | 0.0001 | 31.48% (108) | hypothetical protein Rv3354 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_1178 | - | 3e-06 | 33.94% (109) | hypothetical protein MMAR_1178 |
| M. avium 104 | MAV_4321 | - | 9e-05 | 27.73% (119) | hypothetical protein MAV_4321 |
| M. thermoresistible (build 8) | TH_1573 | - | 4e-19 | 44.12% (102) | conserved hypothetical protein |
| M. ulcerans Agy99 | MUL_1430 | - | 4e-06 | 33.94% (109) | hypothetical protein MUL_1430 |
| M. vanbaalenii PYR-1 | Mvan_4716 | - | 9e-07 | 35.16% (91) | hypothetical protein Mvan_4716 |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_1178|M.marinum_M ----------MRAWRYQPLTVRLLAGAAGLLIASAALAAPAEADSVDDAF
MUL_1430|M.ulcerans_Agy99 ----------MRAWRYQPLTVRLLAGAAGLLTASAALAAPAEADSVDDAF
Rv3354|M.tuberculosis_H37Rv ----------MNLRRHQTLTLRLLAASAGILSA-AAFAAPAQANPVDDAF
MAV_4321|M.avium_104 MKALARTHQWIWVLRHQPFTIRLLAAAAGLLTVASAFAAPAGAEGNGDDF
Mflv_2012|M.gilvum_PYR-GCK --------------MRGTFFITT-LAAAGLATA---LAAPAFADETDDIF
Mvan_4716|M.vanbaalenii_PYR-1 --------------MRGKLIVSAAVAAAGLATA---LAAPAFADETDDIF
MSMEG_1251|M.smegmatis_MC2_155 --------MIITYPARWRASTVALCVAAAAVTATA-LAAPARADQYD--F
TH_1573|M.thermoresistible__bu -------------MRGYRVFAAALVLSASALSASVSMAGPAHADQYD--F
:*. . :*.** *: . *
MMAR_1178|M.marinum_M INALNAAGVNYGDAGGAEALGRSVCPVLSEPGGSFNSAASKVVAGGSGMS
MUL_1430|M.ulcerans_Agy99 INALNAAGVNYGDAGGAEALGRSVCPVLSEPGGSFNSAASKVVAGGSGMS
Rv3354|M.tuberculosis_H37Rv IAALNNAGVNYGDPVDAKALGQSVCPILAEPGGSFNTAVASVVARAQGMS
MAV_4321|M.avium_104 IDALNHAGIDFGEPGNAMAVGESVCPMLSQPGGNFAAVASSVAGR--GMS
Mflv_2012|M.gilvum_PYR-GCK IAALEQEGIPFSTAGNAIELAGAVCEYAA-AGQDKTQIALEIMEP-AGWS
Mvan_4716|M.vanbaalenii_PYR-1 ISALQNQGIPFSTAENAIELASAVCDYAA-AGQDPTQIALEIMEP-AGWT
MSMEG_1251|M.smegmatis_MC2_155 VSMFDNEGVYYSSITDVIDQGKMVCRMLR-NGAGMPAPLDYAAGG--GYA
TH_1573|M.thermoresistible__bu LIELDNAGVWYPSSVDMVDIGKEVCHELR-HRVSPGLVLDKLVNT--GFA
: :: *: : . . ** . * :
MMAR_1178|M.marinum_M PEMAATFTSIAISMYCPSVMANVTSGNLPLQGIPGVPAIPGVPG------
MUL_1430|M.ulcerans_Agy99 PEMAATFTSIAISMYCPSVMANVTSGNLPLQGIPGVPAIPGVPG------
Rv3354|M.tuberculosis_H37Rv QDMAQTFTSIAISMYCPSVMADVASGNLP--------ALPDMPG------
MAV_4321|M.avium_104 PTMARMFTTIAIQTYCPQEMANIASGNLSG----AMPQVPGMPGQLPAMA
Mflv_2012|M.gilvum_PYR-GCK PEQSGFFVGAATQSYCP---------------------------------
Mvan_4716|M.vanbaalenii_PYR-1 AEQSGFFVGAATQSYCPS--------------------------------
MSMEG_1251|M.smegmatis_MC2_155 PYETAVVVASPAMHMCPDVLPTVRAFLGGGSATGA---------------
TH_1573|M.thermoresistible__bu PAEAVIVLASAVTHMCVDVQPAVVSWVNSQQYSAPV--------------
: . . *
MMAR_1178|M.marinum_M --VPGF-----------------
MUL_1430|M.ulcerans_Agy99 --VPGF-----------------
Rv3354|M.tuberculosis_H37Rv --LPGS-----------------
MAV_4321|M.avium_104 GQIPGMAGQTGQLPTMPGQLPSF
Mflv_2012|M.gilvum_PYR-GCK -----------------------
Mvan_4716|M.vanbaalenii_PYR-1 -----------------------
MSMEG_1251|M.smegmatis_MC2_155 -----------------------
TH_1573|M.thermoresistible__bu -----------------------