For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
RAWRYQPLTVRLLAGAAGLLIASAALAAPAEADSVDDAFINALNAAGVNYGDAGGAEALGRSVCPVLSEP GGSFNSAASKVVAGGSGMSPEMAATFTSIAISMYCPSVMANVTSGNLPLQGIPGVPAIPGVPGVPGF*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_1178 | - | - | 100% (138) | hypothetical protein MMAR_1178 |
| M. marinum M | MMAR_2495 | lprJ | 2e-21 | 48.04% (102) | lipoprotein, LprJ |
| M. marinum M | MMAR_2049 | - | 4e-14 | 38.61% (101) | hypothetical protein MMAR_2049 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3389 | - | 2e-42 | 64.23% (137) | hypothetical protein Mb3389 |
| M. gilvum PYR-GCK | Mflv_2217 | - | 2e-12 | 42.16% (102) | hypothetical protein Mflv_2217 |
| M. tuberculosis H37Rv | Rv3354 | - | 7e-43 | 64.96% (137) | hypothetical protein Rv3354 |
| M. leprae Br4923 | MLBr_00676 | - | 2e-35 | 53.03% (132) | hypothetical protein MLBr_00676 |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. avium 104 | MAV_4321 | - | 3e-35 | 55.64% (133) | hypothetical protein MAV_4321 |
| M. smegmatis MC2 155 | MSMEG_4689 | - | 1e-20 | 43.09% (123) | hypothetical protein MSMEG_4689 |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_1430 | - | 1e-74 | 99.28% (138) | hypothetical protein MUL_1430 |
| M. vanbaalenii PYR-1 | Mvan_4478 | - | 6e-13 | 39.09% (110) | hypothetical protein Mvan_4478 |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_1178|M.marinum_M -------------------MR----------AWRYQPLTVRLLAGAAGLL
MUL_1430|M.ulcerans_Agy99 -------------------MR----------AWRYQPLTVRLLAGAAGLL
Mb3389|M.bovis_AF2122/97 -------------------MN----------LRRHQTLTLRLLAASAGIL
Rv3354|M.tuberculosis_H37Rv -------------------MN----------LRRHQTLTLRLLAASAGIL
MLBr_00676|M.leprae_Br4923 MFLRLMLSALKALQRLGAVMNSLARIDHWIWLFRCQPLTIRLLVATAALF
MAV_4321|M.avium_104 ---------MKALARTHQWIW----------VLRHQPFTIRLLAAAAGLL
Mflv_2217|M.gilvum_PYR-GCK -------------------------------MTYPVVAALVASAAMAATL
Mvan_4478|M.vanbaalenii_PYR-1 -----------------------------MKLTYPVVAALVAAATVAATM
MSMEG_4689|M.smegmatis_MC2_155 -------------------------------MSARLPAVLVTAAALAAGV
.: . *. .
MMAR_1178|M.marinum_M IASAALAAPAEADS----VDDAFINALNAAGVNYGDAGGAEALGRSVCPV
MUL_1430|M.ulcerans_Agy99 TASAALAAPAEADS----VDDAFINALNAAGVNYGDAGGAEALGRSVCPV
Mb3389|M.bovis_AF2122/97 SA-AAFAAPAQANP----VDDAFIAALNNAGVNYGDPVDAKALGQSVCPI
Rv3354|M.tuberculosis_H37Rv SA-AAFAAPAQANP----VDDAFIAALNNAGVNYGDPVDAKALGQSVCPI
MLBr_00676|M.leprae_Br4923 TAATAFEVPAEADA----IDDTFIKALNHAGVNFGEPRSAMTMGHYVCPI
MAV_4321|M.avium_104 TVASAFAAPAGAEG----NGDDFIDALNHAGIDFGEPGNAMAVGESVCPM
Mflv_2217|M.gilvum_PYR-GCK SAPPAHADPATD---------AFISTLQHYRLGDIDPATAVRVGQTVCPM
Mvan_4478|M.vanbaalenii_PYR-1 SAAPAQADPTTD---------AFIATLQHYRLGDIDPATAMRVGQTVCPM
MSMEG_4689|M.smegmatis_MC2_155 GATPAHADPAAPGAPGNPVDRSFLTALNNAGVGYADPDAAVRLGQDVCPM
. .* *: *: :*: :. :. * :*. ***:
MMAR_1178|M.marinum_M LSEPGGSFNSAASKVVAGGSGMSPEMAATFTSIAISMYCPSVMANVTSGN
MUL_1430|M.ulcerans_Agy99 LSEPGGSFNSAASKVVAGGSGMSPEMAATFTSIAISMYCPSVMANVTSGN
Mb3389|M.bovis_AF2122/97 LAEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMADAASGN
Rv3354|M.tuberculosis_H37Rv LAEPGGSFNTAVASVVARAQGMSQDMAQTFTSIAISMYCPSVMADVASGN
MLBr_00676|M.leprae_Br4923 LAKSGGNFAAAVQRIRGN-SDMSPQMAETFAKIAISIYCPTMMANVASGN
MAV_4321|M.avium_104 LSQPGGNFAAVASSVAGR--GMSPTMARMFTTIAIQTYCPQEMANIASGN
Mflv_2217|M.gilvum_PYR-GCK LSEPGQNAANVAADVS-EALGRPLGPATMFTGLAISIFCPRAVDAMTDGV
Mvan_4478|M.vanbaalenii_PYR-1 LSEPGQNAANVAADVA-DALGRPLGPATMFTGLAISIFCPRAVSAMTDGV
MSMEG_4689|M.smegmatis_MC2_155 LVEPGKNFASVVTKLRGDRSVVSPDVAAFFAGIAISMYCPQMISGIGDGT
* :.* . .. : . * *: :**. :** : .*
MMAR_1178|M.marinum_M LPLQGIPGVPAIPGVPGVPGF----------------------------
MUL_1430|M.ulcerans_Agy99 LPLQGIPGVPAIPGVPGVPGF----------------------------
Mb3389|M.bovis_AF2122/97 LP--------ALPDMPGLPGS----------------------------
Rv3354|M.tuberculosis_H37Rv LP--------ALPDMPGLPGS----------------------------
MLBr_00676|M.leprae_Br4923 LP--------SLPPGPGIPGI----------------------------
MAV_4321|M.avium_104 LSG-------AMPQVPGMPGQLPAMAGQIPGMAGQTGQLPTMPGQLPSF
Mflv_2217|M.gilvum_PYR-GCK PFS--------FFR-----------------------------------
Mvan_4478|M.vanbaalenii_PYR-1 PFS--------FLR-----------------------------------
MSMEG_4689|M.smegmatis_MC2_155 LLR--------MLAVPGLGALGR--------------------------
: