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M. smegmatis MC2 155 MSMEG_1039 (-)

annotation: periplasmic binding protein
coordinates: 1107692 - 1108765
length: 357

LTFRPLVGTALIAAAASLISGCGTSGEQPVTQPSMTTSVTKIADAGVLGNQRRPDESCAPEPVAADPAPR
RVRNATADGADIAETTEVAGDPQRIVVLSGDQLDALCALGLQSRIVAAALPDGSDAQPSYLGTVVHDVPP
AGDRAAPDVAAIRAADPDLILGSAALTPGAFGELSDIAPTVFTGTPGAAWRDTLRAVGAATGRAGAADDL
IAGFEDAARKTGEDNDAAHFQASVVQLTENTVRVFGADNFPGDVLAAVGLDRPAAQRFTDKPYEEIPADS
DDFSIADADIVYVSFASPAARDKADAVLKGDAWRKLSANRDNRVFVVNNEVWQTGQNIVAARGILDDLRW
VNAPIN*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_1039--100% (357)periplasmic binding protein
M. smegmatis MC2 155MSMEG_2319-0.0100.00% (357) periplasmic binding protein
M. smegmatis MC2 155MSMEG_0438-1e-0627.37% (285) periplasmic binding protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb3070fecB1e-11661.00% (359) FEIII-dicitrate-binding periplasmic lipoprotein
M. gilvum PYR-GCKMflv_4278-1e-12565.30% (366) periplasmic binding protein
M. tuberculosis H37RvRv3044fecB1e-11661.00% (359) FEIII-dicitrate-binding periplasmic lipoprotein
M. leprae Br4923MLBr_01729fecB1e-10554.67% (364) putative FeIII-dicitrate transporter lipoprotein
M. abscessus ATCC 19977MAB_3390-9e-9855.93% (354) FeIII-dicitrate-binding periplasmic lipoprotein
M. marinum MMMAR_1650fecB1e-11760.06% (353) FEIII-dicitrate-binding periplasmic lipoprotein FecB
M. avium 104MAV_3910-1e-11961.56% (359) periplasmic binding protein
M. thermoresistible (build 8)TH_1824fecB1e-12767.24% (351) PROBABLE FEIII-DICITRATE-BINDING PERIPLASMIC LIPOPROTEIN
M. ulcerans Agy99MUL_1886fecB1e-11659.21% (353) FEIII-dicitrate-binding periplasmic lipoprotein FecB
M. vanbaalenii PYR-1Mvan_2081-1e-13067.60% (358) periplasmic binding protein

CLUSTAL 2.0.9 multiple sequence alignment


Mflv_4278|M.gilvum_PYR-GCK          MAGHAARRTLTCRDAGECYGLRVLFTGAQAGRRVARSTGLAAVGTAVVVF
Mvan_2081|M.vanbaalenii_PYR-1       ----------------------MLFTGARADHRWSRSAGLAAVGVAVAVF
MSMEG_1039|M.smegmatis_MC2_155      -----------------------MLT-------FRPLVGTALIAAAASLI
MAB_3390|M.abscessus_ATCC_1997      ---------------------------MQTAR----LWGAAAISAALVTA
TH_1824|M.thermoresistible__bu      --------VPLEPGPDRRRGGVTVGDVIVPGRRIRVIAGMVSLVTAVFLT
Mb3070|M.bovis_AF2122/97            -----------------------------------MRSTVAVAVAAAVIA
Rv3044|M.tuberculosis_H37Rv         -----------------------------------MRSTVAVAVAAAVIA
MLBr_01729|M.leprae_Br4923          ----------------------------------MLPTRAIVTVAAAVIA
MMAR_1650|M.marinum_M               ------------------------------MQFGRMRLGLVAVSLSVAIV
MUL_1886|M.ulcerans_Agy99           ------------------------------MQFGRMRLGLVAVSLSVAIV
MAV_3910|M.avium_104                ----------------------------------MIRPARLAAVTAALVV
                                                                                 :    

Mflv_4278|M.gilvum_PYR-GCK          AAAGCGASGGDGAPEGARSPVETTVTRIAGAGVLGNDRRPDESCAPEPAR
Mvan_2081|M.vanbaalenii_PYR-1       AFTGCGSSGNDTADGPGQRAVETSTTRIASAGVLGNDRRPDESCAPEPAR
MSMEG_1039|M.smegmatis_MC2_155      S--GCGTSGEQPVTQP---SMTTSVTKIADAGVLGNQRRPDESCAPEPVA
MAB_3390|M.abscessus_ATCC_1997      TVSGCTEKPTNETPS----TLATSTTKIASAGVLGNARKPDESCAKDAAA
TH_1824|M.thermoresistible__bu      MATGCGAPQGAEPAPP-RETVITSTTEIAGAGVLGNQRRPDESCAAEPAA
Mb3070|M.bovis_AF2122/97            ASSGCGSDQPAHKAS---QSMITPTTQIAGAGVLGNDRKPDESCARAAAA
Rv3044|M.tuberculosis_H37Rv         ASSGCGSDQPAHKAS---QSMITPTTQIAGAGVLGNDRKPDESCARAAAA
MLBr_01729|M.leprae_Br4923          VGSGCGSGQPGSKPSSPTRSLLTPTTQIAGATVIGNERRPDQACAPEPAT
MMAR_1650|M.marinum_M               MCSGCGSNQPATKAS---RSVTTPTTQIAGAGVLGNDRKADESCAREAAA
MUL_1886|M.ulcerans_Agy99           VCSGCGSNQPATKAS---RSVATPTTQIAGAGVLGNDRKADESCAREAAA
MAV_3910|M.avium_104                ACGGCGSDRPAATTT---RSLVTPTTQIAGAGVLGNDRRPDESCARDAAE
                                       **              .: *..*.**.* *:** *:.*::**  .. 

Mflv_4278|M.gilvum_PYR-GCK          LDDGPPDREVRNADAHGVTPPIPEVTTVRADPQRIVVLSGDQLDALCALG
Mvan_2081|M.vanbaalenii_PYR-1       LDDGPPDREVRNATGHGVSPPIPELTQVRADPQRIVVLSGDHLDALCALG
MSMEG_1039|M.smegmatis_MC2_155      ADPAP--RRVRNATADGAD--IAETTEVAGDPQRIVVLSGDQLDALCALG
MAB_3390|M.abscessus_ATCC_1997      VDPSAP-REVRHAQG---------ETEVPEDAKRIVVLDAGAIDTLCALG
TH_1824|M.thermoresistible__bu      PDPGPPVRDVAHAAG---------STAVPADPQRIVVLSGDQLDALCALG
Mb3070|M.bovis_AF2122/97            ADPGPPTRPAHNAAGVS-----PEMVQVPAEAQRIVVLSGDQLDALCALG
Rv3044|M.tuberculosis_H37Rv         ADPGPPTRPAHNAAGVS-----PEMVQVPAEAQRIVVLSGDQLDALCALG
MLBr_01729|M.leprae_Br4923          VDPGPPTRPAHNVAGVK-----PDVVQVPAEAQRIVVLAGDQLDALCALG
MMAR_1650|M.marinum_M               PDPGPATRPAHNAAGVT-----PDVAQISAEPQRIVVLSGDQLDALCALG
MUL_1886|M.ulcerans_Agy99           PDPGPATRPAHNAAGVT-----PDVAQISAEPQRIVVLSGDQLDALCALG
MAV_3910|M.avium_104                ADPGPAKRQVHNAPGGD-----PAPVQVSADPRRIVVLAGDQLDALCALG
                                     * ..  * . :. .          . :  :.:***** .. :*:*****

Mflv_4278|M.gilvum_PYR-GCK          LQSRIVAAALPDGSDVQPSYLGQLIHDLPGAGTRSDPDLEAIRGAEPDLI
Mvan_2081|M.vanbaalenii_PYR-1       LQSRIVGAALPEGSDAQPAYLGTVIHELPGAGSRTDPDLDAIRAAQPDLI
MSMEG_1039|M.smegmatis_MC2_155      LQSRIVAAALPDGSDAQPSYLGTVVHDVPPAGDRAAPDVAAIRAADPDLI
MAB_3390|M.abscessus_ATCC_1997      LQDRIVGVALADQAAAPPSYLGTTVHNLPSIGPMASPDLAKIGAAKPDLI
TH_1824|M.thermoresistible__bu      LQSRIVAAAVPEDTGVQPAYLGTVIHELPAAGTRTEPDLDAIRAARPDLI
Mb3070|M.bovis_AF2122/97            LQSRIVAAALPNSSSSQPSYLGTTVHDLPGVGTRSAPDLRAIAAAHPDLI
Rv3044|M.tuberculosis_H37Rv         LQSRIVAAALPNSSSSQPSYLGTTVHDLPGVGTRSAPDLRAIAAAHPDLI
MLBr_01729|M.leprae_Br4923          LQYRVAAAALPNDSVSQPSYLGKTVHGLPGVGTRRAPDLSAIAATQPDLI
MMAR_1650|M.marinum_M               LQSRVVGAAFPDGSNSQPSYLGTAVHDLPGVGSRTAPDLKAIDAAHPDLI
MUL_1886|M.ulcerans_Agy99           LQSRVVGAAFPDGSNSQPSYLGTAVHDLPGVGSRTAPDLKAIDAAHPDLI
MAV_3910|M.avium_104                LQSRVVGAALPDGASGQPAYLGGAVRGVPGVGSRSHPDVKAIAAAHPDLI
                                    ** *:...*..: :   *:***  :: :*  *    **:  * .: ****

Mflv_4278|M.gilvum_PYR-GCK          LGSVALTPEEHLELSEIAPTVFE-GPAGAAWKDNLRTVGAATGRAAAADA
Mvan_2081|M.vanbaalenii_PYR-1       LGSVALTPQDHPELAAIAPTVFT-GPAGSAWRDNLRTVGAATGRAAAADG
MSMEG_1039|M.smegmatis_MC2_155      LGSAALTPGAFGELSDIAPTVFT-GTPGAAWRDTLRAVGAATGRAGAADD
MAB_3390|M.abscessus_ATCC_1997      LSSAGEQ-NSYLDLSAIAPTVIV---SGHDLAEHVRLVGKATRRTADTDK
TH_1824|M.thermoresistible__bu      LGSQALTPADYPRLAAIAPTVFT-GAPGPDWQGNLRTVGAATGRSAAADA
Mb3070|M.bovis_AF2122/97            LGSQGLTPQLYPQLAAIAPTVFT-AAPGADWENNLRGVGAATARIAAVDA
Rv3044|M.tuberculosis_H37Rv         LGSQGLTPQLYPQLAAIAPTVFT-AAPGADWENNLRGVGAATARIAAVDA
MLBr_01729|M.leprae_Br4923          LGSQELTPQLYPQLTAIAPTVFTAAAPGATWEDNLRGVGAATARNDAVET
MMAR_1650|M.marinum_M               LGSEALTPNLYAQLAAIAPTVFT-AAPGAAWEDNLRGVGAATARSAAVEE
MUL_1886|M.ulcerans_Agy99           LGSEALTPNLYAQLAAIAPTVFT-AAPGAAWEDNLRGVGAATARSAAVEE
MAV_3910|M.avium_104                LGSQGLTPALYPQLAAIAPTVFT-AAPGAAWRDNLRAVGAATARAGAVDG
                                    *.*       .  *: *****:    .*      :* ** ** *   .: 

Mflv_4278|M.gilvum_PYR-GCK          LIEDFDQAADRTGIDNDATHFQASVVQFTDTTMRVFGVDSFAGSVLADVG
Mvan_2081|M.vanbaalenii_PYR-1       LIEDFDRAADRTGLDNDAAHFQASVVQFTDTTMRVFGPDSFPGSVLAAVG
MSMEG_1039|M.smegmatis_MC2_155      LIAGFEDAARKTGEDNDAAHFQASVVQLTENTVRVFGADNFPGDVLAAVG
MAB_3390|M.abscessus_ATCC_1997      LWTGFVDAAKKVGRENDAAHFQASIVQFTDQTVRVYGANNFPASVLATVG
TH_1824|M.thermoresistible__bu      LLDGFAEDARRTGAQNDAAHFQASVVQLTDTTVRVFGADTFPGSVLAAVG
Mb3070|M.bovis_AF2122/97            LITGFAEHATQVGTKHDATHFQASIVQLTANTMRVYGANNFPASVLSAVG
Rv3044|M.tuberculosis_H37Rv         LITGFAEHATQVGTKHDATHFQASIVQLTANTMRVYGANNFPASVLSAVG
MLBr_01729|M.leprae_Br4923          LINGFSQRATQIGATHDATHYQVSIVQLTTNTMRVYGSNNFPARVLTAVG
MMAR_1650|M.marinum_M               LLSGFTQRARQVGTKHDATHFQASIVQLTRDSMRIYGSRNFAASVLAAVG
MUL_1886|M.ulcerans_Agy99           LLSGFTQRARQVGTKHDATHFQASIVQLTRDSMRIYGSRNFAASVLAAVG
MAV_3910|M.avium_104                LLSGFSQRAGDVGARHDASHFQASIVQLTTGSIRVFGANNFPASVLGAVG
                                    *  .*   *   *  :**:*:*.*:**:*  ::*::*  .*.. **  **

Mflv_4278|M.gilvum_PYR-GCK          VDRPATQRFTDKPYVEVGITDEDLGDSPDLSLADGDLIYVSFATAQARDR
Mvan_2081|M.vanbaalenii_PYR-1       VDRPAAQRFTDKPYVEVGISDEDLGNSPDFSIADGDLVYVSFATAEARER
MSMEG_1039|M.smegmatis_MC2_155      LDRPAAQRFTDKPYEEI------PADSDDFSIADADIVYVSFASPAARDK
MAB_3390|M.abscessus_ATCC_1997      LDRPATQRFTDTPFIEIGT--------EDFSAAEGDIIYVSFTSSSAKDR
TH_1824|M.thermoresistible__bu      LDRPAAQRFTDRPYIDIGATDAELAD-ADFGIAEGDIVYVSFASPAARDR
Mb3070|M.bovis_AF2122/97            VDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCASEAAAER
Rv3044|M.tuberculosis_H37Rv         VDRPPSQRFTDKAYIEIGTTAADLAKSPDFSAADADIVYLSCASEAAAER
MLBr_01729|M.leprae_Br4923          VDRPTSQRFTDQAYIQSGITDADLAKEPDFSAVDADIIYVSCTSPAVAKR
MMAR_1650|M.marinum_M               VDRPASQRFTDKPYLEMGTTDAELAKGPDFSAADADIIYVSCASPAAAER
MUL_1886|M.ulcerans_Agy99           VDRPASQRFTDKPYLEMGTTDAELAKGPDFSAADADIIYVSCASPAAAER
MAV_3910|M.avium_104                VDRPAAQRFTDKPYLEIGATDADLAKNPDLSVADADVVYLSCATPAAADR
                                    :***.:***** .: :            *:. .:.*::*:* ::  . .:

Mflv_4278|M.gilvum_PYR-GCK          APKVLESDAWRRLSATRDDRVFAVNNEVWQGDQGPNGIVAARGILADLRW
Mvan_2081|M.vanbaalenii_PYR-1       APKVLDSDAWRRLSANRDGRVFAVNNEVWQTGEG---IVAARGMLADLRW
MSMEG_1039|M.smegmatis_MC2_155      ADAVLKGDAWRKLSANRDNRVFVVNNEVWQTGQN---IVAARGILDDLRW
MAB_3390|M.abscessus_ATCC_1997      AARIFGSKPWMALGATRDNRVFAVNNEVWQTGDG---IVAGRGILDDLQW
TH_1824|M.thermoresistible__bu      ARTVFTSDAWRRLSATKDNRVFTVNNEVWQTGQN---IVAARGILDDLQW
Mb3070|M.bovis_AF2122/97            AAVILDSDPWRKLSANRDNRVFVVNDQVWQTGEG---MVAARGIVDDLRW
Rv3044|M.tuberculosis_H37Rv         AAVILDSDPWRKLSANRDNRVFVVNDQVWQTGEG---MVAARGIVDDLRW
MLBr_01729|M.leprae_Br4923          AATVLDSGPWRKLSANHDNRIFIVNDEVWQTGEG---LIAARGIVDDLRW
MMAR_1650|M.marinum_M               AATVLDSGPWRKLSANHDNRVLIVNDEIWQTGEG---LVAARGIVDDLRW
MUL_1886|M.ulcerans_Agy99           AATVLDSGPWRKLSANHDSRVLIINDEIWQTGEG---LVAARGIVDDLRW
MAV_3910|M.avium_104                AATVLDSGPWRKLSANRDNRVYVVNDEIWQTGQG---LIAARGIVDDLRL
                                    *  :: . .*  *.*.:*.*:  :*:::** .:.   ::*.**:: **: 

Mflv_4278|M.gilvum_PYR-GCK          VNSPIN
Mvan_2081|M.vanbaalenii_PYR-1       VNAPIN
MSMEG_1039|M.smegmatis_MC2_155      VNAPIN
MAB_3390|M.abscessus_ATCC_1997      VNAPIN
TH_1824|M.thermoresistible__bu      VNAPIN
Mb3070|M.bovis_AF2122/97            VDAPIN
Rv3044|M.tuberculosis_H37Rv         VDAPIN
MLBr_01729|M.leprae_Br4923          INAPIN
MMAR_1650|M.marinum_M               VNAPIN
MUL_1886|M.ulcerans_Agy99           VNAPIN
MAV_3910|M.avium_104                VNAPIN
                                    :::***