For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_0467 (-)

annotation: membrane transport protein
coordinates: 543882 - 544481
length: 199

NSPLVLGFLTSMALIAAIGAQNAFVLRQGIRREHVLPVIAVCTVSDLLLITAGIAGVGAVITAHPDAVTV
TKFGGAAFLIGYGVLAARRALRPSTLNPSERTPARLAEVLVTCLALTWLNPHVYLDTVVLLGTLANEQRE
QRWLFGAGAVLASAIWFLGLGLGAKRLAGLFATPMTWRILDGVIAVTMIALGLGMMLT*
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_0467--100% (199)membrane transport protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb2008-6e-8073.37% (199) integral membrane protein
M. gilvum PYR-GCKMflv_0373-9e-7872.25% (191) lysine exporter protein LysE/YggA
M. tuberculosis H37RvRv1986-6e-8073.37% (199) integral membrane protein
M. leprae Br4923-----
M. abscessus ATCC 19977MAB_4386-9e-7469.23% (195) putative transporter
M. marinum M-----
M. avium 104-----
M. thermoresistible (build 8)-----
M. ulcerans Agy99-----
M. vanbaalenii PYR-1Mvan_0310-2e-8072.92% (192) lysine exporter protein LysE/YggA

CLUSTAL 2.0.9 multiple sequence alignment


Mb2008|M.bovis_AF2122/97            MNSP---LVVGFLACFTLIAAIGAQNAFVLRQGIQREHVLPVVALCTVSD
Rv1986|M.tuberculosis_H37Rv         MNSP---LVVGFLACFTLIAAIGAQNAFVLRQGIQREHVLPVVALCTVSD
MSMEG_0467|M.smegmatis_MC2_155      MNSP---LVLGFLTSMALIAAIGAQNAFVLRQGIRREHVLPVIAVCTVSD
Mflv_0373|M.gilvum_PYR-GCK          MSTTSLVVLSGFASSMALIAAIGAQNAFVLRQGIRGEHVLPVVAVCAVSD
Mvan_0310|M.vanbaalenii_PYR-1       MNPAYVVVLSGFATTMALIAAIGAQNAFVLRQGIRGEHVLPVVAVCTVSD
MAB_4386|M.abscessus_ATCC_1997      MTVL----FLGFLTGMSLIAAIGAQNAFVLRQGIRSEHVLPVIAVCITGD
                                    *.      . ** : ::*****************: ******:*:* ..*

Mb2008|M.bovis_AF2122/97            IVLIAAGIAGFGALIGAHPRALNVVKFGGAAFLIGYGLLAARRAWRPVAL
Rv1986|M.tuberculosis_H37Rv         IVLIAAGIAGFGALIGAHPRALNVVKFGGAAFLIGYGLLAARRAWRPVAL
MSMEG_0467|M.smegmatis_MC2_155      LLLITAGIAGVGAVITAHPDAVTVTKFGGAAFLIGYGVLAARRALRPSTL
Mflv_0373|M.gilvum_PYR-GCK          LVLIAAGIAGVGALIAAHPDVVTVTRYGGAAFLIGYGLFAARRAVKPGVL
Mvan_0310|M.vanbaalenii_PYR-1       LVLISAGIAGFGALIAAHPDIVTATKFGGAAFLVGYGLLAARRAVKPGVL
MAB_4386|M.abscessus_ATCC_1997      FLLIAAGIGGLGGLITATPSLLTVAKVGGAAFLIGYGLMAARRALRPGTL
                                    ::**:***.*.*.:* * *  :...: ******:***::***** :* .*

Mb2008|M.bovis_AF2122/97            IPSGATPVRLAEVLVTCAAFTFLNPHVYLDTVVLLGALANEHSDQRWLFG
Rv1986|M.tuberculosis_H37Rv         IPSGATPVRLAEVLVTCAAFTFLNPHVYLDTVVLLGALANEHSDQRWLFG
MSMEG_0467|M.smegmatis_MC2_155      NPSERTPARLAEVLVTCLALTWLNPHVYLDTVVLLGTLANEQREQRWLFG
Mflv_0373|M.gilvum_PYR-GCK          TPADAAPARLAAVLATCLALTFLNPHVYLDTVVLLGMLANEHQDSRWLFG
Mvan_0310|M.vanbaalenii_PYR-1       TPADAAPARLTAVLATCLAMTFLNPHVYLDTVILLGALANEHQDSKWLFG
MAB_4386|M.abscessus_ATCC_1997      VPAESNPARLGAVLLTALAITFLNPHVYLDTVVLLGSLANAHRDARWLFG
                                     *:   *.**  ** *. *:*:**********:*** *** : : :****

Mb2008|M.bovis_AF2122/97            LGAVTASAVWFATLGFGAGRLRGLFTNPGSWRILDGLIAVMMVALGISLT
Rv1986|M.tuberculosis_H37Rv         LGAVTASAVWFATLGFGAGRLRGLFTNPGSWRILDGLIAVMMVALGISLT
MSMEG_0467|M.smegmatis_MC2_155      AGAVLASAIWFLGLGLGAKRLAGLFATPMTWRILDGVIAVTMIALGLGMM
Mflv_0373|M.gilvum_PYR-GCK          VGAVTASAVWFAGLGFGATRVRHWFASPRTWRLLDAAIAAVMIALGVSLL
Mvan_0310|M.vanbaalenii_PYR-1       VGAVAASALWFTGLGFGAKRLRHLFASPKTWRLLDGVIAATMLALGISLV
MAB_4386|M.abscessus_ATCC_1997      AGALTASVTWFVGLGYGARYLAGVFERPGTWRMLDAGIAVVMLALGVSLL
                                     **: **. **  ** **  :   *  * :**:**. **. *:***:.: 

Mb2008|M.bovis_AF2122/97            VT
Rv1986|M.tuberculosis_H37Rv         VT
MSMEG_0467|M.smegmatis_MC2_155      LT
Mflv_0373|M.gilvum_PYR-GCK          MR
Mvan_0310|M.vanbaalenii_PYR-1       VS
MAB_4386|M.abscessus_ATCC_1997      VS
                                    :