For questions or suggestions e-mail us at: ioerger@cs.tamu.edu

M. smegmatis MC2 155 MSMEG_0462 (-)

annotation: MmpS4 protein
coordinates: 538102 - 538545
length: 147

VGYAVYRVMKRFWIPLLLVVVVAVGAYAIVRIREAAGAHAPTVAEGTALTENFNPKHITYEVTGAGGSAN
LNYLDENGQPHLVENAPLPWSFTIVTTLPSMSANIMAQGDRNVSGLRCRVTVDGEIRDDRASDDLVEPFI
YCLVKSV
Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_0462--100% (147)MmpS4 protein
M. smegmatis MC2 155MSMEG_1381-9e-3045.59% (136) MmpS5 protein
M. smegmatis MC2 155MSMEG_0226-8e-2844.76% (143) MmpS5 protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97Mb0696cmmpS51e-2944.29% (140) hypothetical protein Mb0696c
M. gilvum PYR-GCKMflv_3028-2e-2741.96% (143) membrane family protein
M. tuberculosis H37RvRv0677cmmpS51e-2944.29% (140) hypothetical protein Rv0677c
M. leprae Br4923MLBr_02377-3e-2636.49% (148) hypothetical protein MLBr_02377
M. abscessus ATCC 19977MAB_4311c-1e-6174.83% (143) MmpS family protein
M. marinum MMMAR_3743mmpS5_13e-3147.92% (144) membrane protein MmpS5_1
M. avium 104MAV_4756-2e-4667.15% (137) membrane protein
M. thermoresistible (build 8)TH_2866-2e-3044.52% (146) PUTATIVE hypothetical protein Mvan_3834
M. ulcerans Agy99MUL_3687mmpS5_18e-3248.23% (141) membrane protein MmpS5_1
M. vanbaalenii PYR-1Mvan_1058-7e-3146.43% (140) hypothetical protein Mvan_1058

CLUSTAL 2.0.9 multiple sequence alignment


MMAR_3743|M.marinum_M               ------MPTIPVTSVLKRAWIPLLMVVVLAISGLVVSRLHKIFGSEDLNA
MUL_3687|M.ulcerans_Agy99           --------------MLKRAWIPLLMVVVLAISGFVVSRLHKIFGSEDLNA
Mb0696c|M.bovis_AF2122/97           -----------MIGTLKRAWIPLLILVVVAIAGFTVQRIRTFFGSEGILV
Rv0677c|M.tuberculosis_H37Rv        -----------MIGTLKRAWIPLLILVVVAIAGFTVQRIRTFFGSEGILV
Mflv_3028|M.gilvum_PYR-GCK          -----------MITVVKRVWLPVLIVVALAIGFVSISYLRSVFGSNGAVV
Mvan_1058|M.vanbaalenii_PYR-1       -----------MITVVKRVWLPVLVIAAVAVGAVTVANLRSVFGSDKAIV
MLBr_02377|M.leprae_Br4923          MSKRQRGKGISIFKLLSRIWIPLVILVVLVVGGFVVYRVHSYFASEKRES
TH_2866|M.thermoresistible__bu      -LWTSKAKDSAILTRLARAWIPLVMVVVVAIGGFAVWRIRGIFGSEQLPT
MSMEG_0462|M.smegmatis_MC2_155      -------MGYAVYRVMKRFWIPLLLVVVVAVGAYAIVRIREAAGAH-APT
MAB_4311c|M.abscessus_ATCC_199      -----------MYRLLKRFWIPLLLVVVVGIGGYAIAQIRGSAAPR-PAK
MAV_4756|M.avium_104                --------------------MPLLLVVVISLGAYAVVRIRDTFGTHGGVT
                                                        :*::::..: :.   :  ::   ..     

MMAR_3743|M.marinum_M               NAGAGIDIVQ-FNPKVVIYEISGPAGSTANINFWDADANTHQVNAAPLPW
MUL_3687|M.ulcerans_Agy99           NAGAGIDIVQ-FNPKVVIYEISGPAGSTANINFWDADANTHQVNAAPLPW
Mb0696c|M.bovis_AF2122/97           TPKVFADDPEPFDPKVVEYEVSG-SGSYVNINYLDLDAKPQRIDGAALPW
Rv0677c|M.tuberculosis_H37Rv        TPKVFADDPEPFDPKVVEYEVSG-SGSYVNINYLDLDAKPQRIDGAALPW
Mflv_3028|M.gilvum_PYR-GCK          TP-VGSDTAEDFNPTVVTYEVFG-TGSFAVINYTDLDGLPQRTGQVSLPW
Mvan_1058|M.vanbaalenii_PYR-1       TP-VDADTAENFNPKVVTYEIFG-SGSTATINYADLDGKPQRTGEVSLPW
MLBr_02377|M.leprae_Br4923          YADSNLGSSKPFNPKQIVYEVFGPPGTVADISYFDANSDPQRIDGAQLPW
TH_2866|M.thermoresistible__bu      YAGSTSVDTDKANPKRVRYEIFGAPGTVADINYIDAEGDPHQVNGATLPW
MSMEG_0462|M.smegmatis_MC2_155      VAEGTA-LTENFNPKHITYEVTGA-GGSANLNYLDENGQPHLVENAPLPW
MAB_4311c|M.abscessus_ATCC_199      LGEGSG-ITANFNPKHITYEVVGS-GGTANLNYLDENGQPHLIENAPLPW
MAV_4756|M.avium_104                SGEGAGDNTKPFHPKHITYEITGAPAGTVNANYLDENGQPHLVESAPLPW
                                                .*. : **: *  .  .  .: * :. .:    . ***

MMAR_3743|M.marinum_M               SFTISTTLPSVSANIMAQGDG--SQIGCRITVDGVVREEKSAAG-VNPQT
MUL_3687|M.ulcerans_Agy99           SFTISTTLPSVSANIMAQGDG--SQIGCRITVDGVVREEKSAAG-VNPQT
Mb0696c|M.bovis_AF2122/97           SLTLKTTAPSAAPNILAQGDG--TSITCRITVDGEVKDERTATG-VDALT
Rv0677c|M.tuberculosis_H37Rv        SLTLKTTAPSAAPNILAQGDG--TSITCRITVDGEVKDERTATG-VDALT
Mflv_3028|M.gilvum_PYR-GCK          TLTLETTIPSVRPDLLAQGNG--QFIGCRVTVDGEVEDERTAEG-VNAAT
Mvan_1058|M.vanbaalenii_PYR-1       SLTLETTLPSVMPNIMAQGDG--QSITCRVTVDDEVKDERTAEG-LNAAT
MLBr_02377|M.leprae_Br4923          SLLMTTTLAAVMGNLVAQGNT--DSIGCRIIVDGVVKAERVSNE-VNAYT
TH_2866|M.thermoresistible__bu      SIEIVTNSPAMAGNVLAQGDS--DFIGCRIVSDGVVKDERTTQR-VSAYV
MSMEG_0462|M.smegmatis_MC2_155      SFTIVTTLPSMSANIMAQGDRNVSGLRCRVTVDGEIRDDRASDDLVEPFI
MAB_4311c|M.abscessus_ATCC_199      SFTIVTTLPSMSANIVAQGDRSVTDLGCRVTVDGQVRDDRSSADKVKPFI
MAV_4756|M.avium_104                SFTIVTTLPSMSANIVAQASEQVHALRCRVIVDDQVRDDRNTND-YQPFI
                                    :: : *. .:   :::**..     : **:  *. :. :: :    ..  

MMAR_3743|M.marinum_M               FCLVKSA
MUL_3687|M.ulcerans_Agy99           FCLVKSA
Mb0696c|M.bovis_AF2122/97           YCFVKSA
Rv0677c|M.tuberculosis_H37Rv        YCFVKSA
Mflv_3028|M.gilvum_PYR-GCK          YCLVKAA
Mvan_1058|M.vanbaalenii_PYR-1       YCLVKAA
MLBr_02377|M.leprae_Br4923          YCLVKSA
TH_2866|M.thermoresistible__bu      YCFTKSA
MSMEG_0462|M.smegmatis_MC2_155      YCLVKSV
MAB_4311c|M.abscessus_ATCC_199      YCLVKSV
MAV_4756|M.avium_104                YCLVKSV
                                    :*:.*:.