For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
PDKVPNKLPPEFADLEPFSGWCLGSEPERYAKRLASTMTEIQAFYDAITPRAEEAISYCDKFPLDDLPED VLNLLHLLYSMVTVSFPVECWKQPRVPDSGATWLDCVAEPVP*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_0298 | - | - | 100% (113) | hypothetical protein MSMEG_0298 |
M. smegmatis MC2 155 | MSMEG_4841 | - | 7e-32 | 60.00% (105) | hypothetical protein MSMEG_4841 |
M. smegmatis MC2 155 | MSMEG_0292 | - | 7e-27 | 47.66% (107) | hypothetical protein MSMEG_0292 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_2465 | - | 1e-50 | 83.02% (106) | hypothetical protein Mflv_2465 |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_4745 | - | 1e-40 | 63.55% (107) | hypothetical protein MMAR_4745 |
M. avium 104 | MAV_3966 | - | 1e-50 | 81.90% (105) | hypothetical protein MAV_3966 |
M. thermoresistible (build 8) | TH_0261 | - | 9e-49 | 80.19% (106) | conserved hypothetical protein |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_4189 | - | 1e-49 | 81.13% (106) | hypothetical protein Mvan_4189 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_2465|M.gilvum_PYR-GCK -----MTTSPKLPPEFADLEEFSDWCLGSEPERYAKRLSSSMPEMQAFYD Mvan_4189|M.vanbaalenii_PYR-1 MSMAAQAATAKLPPEFADLEAFSDWCLRSEPERYAKRLSSSMPELQAFYD TH_0261|M.thermoresistible__bu -------MTAKLPPEFADLERFSDWILPTEPQRYAKRLGSSMQEMQEFYD MAV_3966|M.avium_104 -----MNTMSMLPAEFADLEPFADWCLPSEPERYAKRLASSMTEMKAFYD MSMEG_0298|M.smegmatis_MC2_155 ---MPDKVPNKLPPEFADLEPFSGWCLGSEPERYAKRLASTMTEIQAFYD MMAR_4745|M.marinum_M -----MATPNKLPAQFADLEPYLDWDLATEPQRYAKRLASSMSQMQGFYD **.:***** : .* * :**:******.*:* ::: *** Mflv_2465|M.gilvum_PYR-GCK AITARAEEAIAYCDKFSLDDLPEDVLNLMHMLYSMIQASFPVECWKQPKV Mvan_4189|M.vanbaalenii_PYR-1 AITARAEEAIAYCDKFSLDDMPEDVLNLMHMLYSMIQASFPVECWKQPKV TH_0261|M.thermoresistible__bu AIIARAEEALAYCDKFALDDLPEDVLNLMHLLYSMITVSFPVECWKQPRI MAV_3966|M.avium_104 AITPRAEEALAFCDKFSLDDLPDDVLNLMHMLYSMIMVSFPVECWKQPRV MSMEG_0298|M.smegmatis_MC2_155 AITPRAEEAISYCDKFPLDDLPEDVLNLLHLLYSMVTVSFPVECWKQPRV MMAR_4745|M.marinum_M TAFPRLEDVIAYCDQFPLDELPEDARTLMHMMQSLVMVSFPVEAWKQPRV : .* *:.:::**:*.**::*:*. .*:*:: *:: .*****.****:: Mflv_2465|M.gilvum_PYR-GCK PDTGATSLDCDAEPVP Mvan_4189|M.vanbaalenii_PYR-1 PDTGATSLDCDAEPVP TH_0261|M.thermoresistible__bu PDSGASTLDCVAEPVP MAV_3966|M.avium_104 PDSGASTLDCVSEPVP MSMEG_0298|M.smegmatis_MC2_155 PDSGATWLDCVAEPVP MMAR_4745|M.marinum_M PDSGAAWVELIREPVV **:**: :: ***