For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
ARLPSAFAELEPYAETWCLATETARWERRVSSSMPQLHDFYDAFFPRLEEAIEYCDKYPLDDMPDDAVNL LHLIYSLIMVAMAVEIMHQPAPVDAADAVMVRTGEPTP*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_0292 | - | - | 100% (109) | hypothetical protein MSMEG_0292 |
M. smegmatis MC2 155 | MSMEG_0298 | - | 6e-27 | 47.66% (107) | hypothetical protein MSMEG_0298 |
M. smegmatis MC2 155 | MSMEG_4841 | - | 3e-19 | 42.86% (105) | hypothetical protein MSMEG_4841 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_2471 | - | 2e-38 | 62.26% (106) | hypothetical protein Mflv_2471 |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | MMAR_4745 | - | 2e-25 | 48.57% (105) | hypothetical protein MMAR_4745 |
M. avium 104 | MAV_3960 | - | 2e-50 | 83.02% (106) | hypothetical protein MAV_3960 |
M. thermoresistible (build 8) | TH_0025 | - | 1e-39 | 65.14% (109) | conserved hypothetical protein |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_4183 | - | 1e-37 | 60.75% (107) | hypothetical protein Mvan_4183 |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_0292|M.smegmatis_MC2_155 --MAR-LPSAFAELEPYAETWCLATETARWERRVSSSMPQLHDFYDAFFP MAV_3960|M.avium_104 MTMASMLPSAFAELEGYAQTWCLPTETERWNARVNASMPQLRDFYDAFFP Mflv_2471|M.gilvum_PYR-GCK MPGPT-LPDAFAEFEQFAEKWCLATEPERWETRLNTPMPEIHAFYEAFSP Mvan_4183|M.vanbaalenii_PYR-1 MAEPK-LPGTFAEFERFAEKWCLATEPDRWQMRLSTPMGEIHEFYDAFTP TH_0025|M.thermoresistible__bu VSMAR-LPSAFAEYERFAEKWCLATEPERWETRLNTPMAQLREFYDAFSP MMAR_4745|M.marinum_M MATPNKLPAQFADLEPYLD-WDLATEPQRYAKRLASSMSQMQGFYDTAFP . ** **: * : : * *.**. *: *: :.* ::: **:: * MSMEG_0292|M.smegmatis_MC2_155 RLEEAIEYCDKYPLDDMPDDAVNLLHLIYSLIMVAMAVEIMHQPAPVDAA MAV_3960|M.avium_104 RLEEAIDYCDKFPLDNLPDDVVNLLHMIYSLIMVAMAVEIMHQPAPVDAA Mflv_2471|M.gilvum_PYR-GCK RFEEAIDYCDKFPLDDLPDDVLNLLHLVYSMIMVSMAVEVFGTQKPADSA Mvan_4183|M.vanbaalenii_PYR-1 RFEEAIDYCDKFPLDELPEDVLNLLHLIYSMIMVSMAVEVFGTQKPADSA TH_0025|M.thermoresistible__bu RFEEAIDYCDKYPLDDLPEDVLNLLHMIYSMVMVSMAVEIFGTQKPVDSA MMAR_4745|M.marinum_M RLEDVIAYCDQFPLDELPEDARTLMHMMQSLVMVSFPVEAWKQPRVPDSG *:*:.* ***::***::*:*. .*:*:: *::**::.** *:. MSMEG_0292|M.smegmatis_MC2_155 DAVMVRTGEPTP MAV_3960|M.avium_104 DAVMIRTGGPVP Mflv_2471|M.gilvum_PYR-GCK DAVIDRVSAPVP Mvan_4183|M.vanbaalenii_PYR-1 DAVIDRVGAPVP TH_0025|M.thermoresistible__bu DAEMHRVSAPVP MMAR_4745|M.marinum_M AAWVELIREPVV * : *.