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M. smegmatis MC2 155 MSMEG_0237 (-)

annotation: ISMsm3, transposase
coordinates: 266047 - 267453
length: 468 

VKSIAAASRVKVSADGHGVVSHAGMGLLRELADRTGLSAQVTGALADTYRGPWTYAPGEVFADLAAAVAD
GADCIDGVGQLCGDREHAFGAKASTTTMWRLVDERIDAAHLPAVRAARASARAAAWAAGAAPEPGGWLHI
DIDATVVIDHSDNKHGATPTWKKTFGHHPLLAFLDRPEIAGGEALAGLLRSGNAGSNTASDHIIVLAQAL
AALPAPWRPDSSRGGDPDRPQVLVRCDTAGATHRFADACREQGVGFSFGYPVDARVQDAADTLNLAEGWY
PAIDTDGGIRDGAWVAEATTLVNLNSWPPGTRLILRKERPHPGAQLRFTDTDGMRVTAFITDTPTGVVAG
QVAGLELRHRQHARVEDRIRELKNTGLRNLPCHGFWANAAWLEIVLAATDLVTWARLIGFTSDPTLARAE
IATFRYRVLHVAARITRGARQLRLRIDATWRWASAIATAWQHLRTAFG

Operon Prediction Model: Genebank

Paralogs
speciesidgenee-valueidentity (len)annotation
M. smegmatis MC2 155MSMEG_0237--100% (468)ISMsm3, transposase
M. smegmatis MC2 155MSMEG_6146-0.0100.00% (468) ISMsm3, transposase
M. smegmatis MC2 155MSMEG_4127-2e-2227.35% (479) TnpC protein

Closest Orthologs (e-value cutoff: 1e-4)
speciesidgenee-valueidentity (len)annotation
M. bovis AF2122 / 97-----
M. gilvum PYR-GCKMflv_3048-0.097.44% (468) transposase, IS4 family protein
M. tuberculosis H37Rv-----
M. leprae Br4923-----
M. abscessus ATCC 19977-----
M. marinum MMMAR_3317-0.083.33% (468) transposase for ISMyma07
M. avium 104MAV_1972-0.087.82% (468) putative transposase
M. thermoresistible (build 8)TH_1997-1e-17685.55% (346) ISMsm3, transposase
M. ulcerans Agy99-----
M. vanbaalenii PYR-1Mvan_5550-1e-2125.95% (474) transposase, IS4 family protein

CLUSTAL 2.0.9 multiple sequence alignment


MSMEG_0237|M.smegmatis_MC2_155      ------------MKSIAAASRVK---VSADGHGVVSHAGMGLLRELADRT
Mflv_3048|M.gilvum_PYR-GCK          ------------MKSIAAASRVK---VSADGHGVVSHAGMGLLRELADRT
MAV_1972|M.avium_104                ------------MKNIAAGSRVK---VSADGHGVVSHAGMGMLRELADRT
MMAR_3317|M.marinum_M               ------------MESSAAVSRVK---VSAGGRGVVSHAGMGLLRELADLT
TH_1997|M.thermoresistible__bu      ---------LNAVREVFPATREQRCWFHKQANVLAALPKSAHPSALAALK
Mvan_5550|M.vanbaalenii_PYR-1       MFSTHLSTQLRKALPVQVSHKFAASSAVFDDDHLVSCAGLVPVMTLAAQT
                                                        :            :.: .       **  .

MSMEG_0237|M.smegmatis_MC2_155      GLSAQVTGAL--ADTYRGPWTYAPGEVFADLAAAVADGADCIDGVGQLCG
Mflv_3048|M.gilvum_PYR-GCK          GLSAQVTGAL--ADTYRGPWTYAPGEVFADLAAAVADGADCIDGVGQLCG
MAV_1972|M.avium_104                GLSAQVSAAL--ADTYRGPWVYAPGDVFADLAAAVADGADCIDGVGQLCG
MMAR_3317|M.marinum_M               GLSAQVTAAP--ADTYRGPWVYAPGDIFADLAAAVADGADCIDGVGQLCG
TH_1997|M.thermoresistible__bu      EIYNAEDIDK--AQVAVKAFEVDFGAKYPKAVAKITDDLDTLLEFYRYPA
Mvan_5550|M.vanbaalenii_PYR-1       GLAQLLAAKVRITEPRIKSGSANPAPKLTTVVAGMCAGADCIDDLDLVRS
                                     :          ::    .     .   .  .* :  . * :  .    .

MSMEG_0237|M.smegmatis_MC2_155      DREHAFGAKASTTTMWRLVDERIDAAHLPAVRAARASAR------AAAWA
Mflv_3048|M.gilvum_PYR-GCK          DREHAFGAKASTTTMWRLVDERIDAAHLPAVRAARASAR------AAAWA
MAV_1972|M.avium_104                DREHVFGAKASTTTMWRLIDKRIDAARLPGVRAARAGAR------AAAWA
MMAR_3317|M.marinum_M               DREHVFGAKASTTTMWRLVDQRIDAAHLPGIHAARAAAR------AAAWA
TH_1997|M.thermoresistible__bu      EHWIHLRTTNPIESTFATVRLRTKVTKGPGSRAAGLAMAYKLIDAAAXWD
Mvan_5550|M.vanbaalenii_PYR-1       GGMKTLFDGVYAPSTIGTLLREFTFGHARQLESVLREHLAG-----LCER
                                         :       :    :  .    :    .:.                

MSMEG_0237|M.smegmatis_MC2_155      AGAAPEPGGWLHIDIDATVVIDHSDNKHGATPTWKKTFGHHPLLAFLDRP
Mflv_3048|M.gilvum_PYR-GCK          AGAAPEPGGWLHIDIDATLVIDHSDNKHGATPTWKKSFGHHPLLAFLDRP
MAV_1972|M.avium_104                AGATPTGDGWLHIDIDATLVIDHSDNKTGATPTWKKTFGLHPLLAFLDRP
MMAR_3317|M.marinum_M               AGAAPAPGEWLHIDIDATLVIDHSDNKELATPTWKKSFGVHPLLAFLDRP
TH_1997|M.thermoresistible__bu      AAAAPADQDWLHIDLDATLVIDHSDNKAGATPTWKKTFGHHPLLAFLDRP
Mvan_5550|M.vanbaalenii_PYR-1       VQLLPGSDERAFVDIDSLLRPVYGRAKQGASYGHTKIAGKQILRKGLSPL
                                    .   *      .:*:*: :   :.  *  *:   .*  * : *   *.  

MSMEG_0237|M.smegmatis_MC2_155      EIAGGEALAGLLRSGNAGSNTASDHIIVLAQALAALPAPWRPDSSRGGDP
Mflv_3048|M.gilvum_PYR-GCK          EIAGGEALAGLLRSGNAGSNTASDHIIVLAQALAALPAPWRPDPSRGGGP
MAV_1972|M.avium_104                EISGGEALAGLLRTGNAGSNTASDHIIVLKQALASLPPRWRPHPGARADP
MMAR_3317|M.marinum_M               EIAGGEALAGLLHTGRAGSNTAADHITVLDQALASLPPAWRPDPGRGGDP
TH_1997|M.thermoresistible__bu      EIAGGEALGGLLRTSNAGANTASDHIIVLEQALAALPPAWQPDPDQPGDP
Mvan_5550|M.vanbaalenii_PYR-1       VTTISTETAAPVITGARLRAGKTNSGKGAARMIAQAVATARASGVTG---
                                      : .   .. : :.       ::      : :*   .  :.        

MSMEG_0237|M.smegmatis_MC2_155      DRPQVLVRCDTAGATHRFADACREQGVGFSFGYPVDARVQDAADTLNLAE
Mflv_3048|M.gilvum_PYR-GCK          DRPQVLVRCDTAGATHRFADACREQGVGFSFGYPVDARVQDAVDTLNLAQ
MAV_1972|M.avium_104                DASGVLVRCDTAGATHKFADACRAAGVGFSFGYPVDVRVQDAVDTLNLAD
MMAR_3317|M.marinum_M               DAPKVLVRCDSAGSTHAFADACRAAGVGFSFGYPVDWRVQDAVDTLTLGD
TH_1997|M.thermoresistible__bu      DKPKVLVRCDTAGATHKFAEACRTAGVGFSFGYPVDVRVQDAVDTLNLGS
Mvan_5550|M.vanbaalenii_PYR-1       ---QILVRGDSAYGNSAVVAACRRAGARFSLVLTKTAAVAAAIESIS-ES
                                        :*** *:* ..  .. ***  *. **:  .    *  * :::.  .

MSMEG_0237|M.smegmatis_MC2_155      GWYPAIDTDGGIRD---GAWVAEATTLVN-LNSWPPGTRLILRKERPHPG
Mflv_3048|M.gilvum_PYR-GCK          GWYPAIDTDGGLRD---GAWVAEATTLVN-LNSWPPGTRLILRKERPHPG
MAV_1972|M.avium_104                GWYPAIDTDGGIRE---GAWVAEATDLVN-LSSWPAGTRLILRKERPHPG
MMAR_3317|M.marinum_M               AWYPGIDTDGGIRD---GAWVAEATGLVN-LSAWPAGTRLILRKERPHPG
TH_1997|M.thermoresistible__bu      CWYPAIDTRGGIRD---GAWVAEATDLVN-LESWPPGTRLILRKERPHPG
Mvan_5550|M.vanbaalenii_PYR-1       AWVP-VKYPGAVRDPDTGAWISDAEVAETTYTAFSSTKTPVTARLIVRRV
                                     * * :.  *.:*:   ***:::*    .   ::.. .  :  :   :  

MSMEG_0237|M.smegmatis_MC2_155      AQLRFTDTDG--MRVTAFITDTPTGVVAGQVAGLELRHRQHARVEDRIRE
Mflv_3048|M.gilvum_PYR-GCK          AQLRFTDTDG--MRVTAFITDTPTGVVAGQVAGLELRHRQHARVEDRIRE
MAV_1972|M.avium_104                AQLRFTDADG--MRVTAFITDTEPGVIAGQVAGLELRHRQHARVEDRIRE
MMAR_3317|M.marinum_M               AQLRFTDADG--MRVTAFITDTGPAAVPGQVAGLELRHRQHARVEDRIRE
TH_1997|M.thermoresistible__bu      AQLRFTDADG--MRVTAFITDTPHGVVPGQVAGLELRHRQHARVEDRIRE
Mvan_5550|M.vanbaalenii_PYR-1       KDARFLDALFPVWRYHPFFTDSDE-----PVDASDITHRRHAIIETVFAD
                                     : ** *:     *  .*:**:        * . :: **:** :*  : :

MSMEG_0237|M.smegmatis_MC2_155      LKNTGLRNLPCHGFWANAAWLEIVLAATDLVTWARLIGFTSDPTLARAEI
Mflv_3048|M.gilvum_PYR-GCK          LKNTGLRNLPCHGFWANAAWLEIVLAAADLVTWARLIGFTSDPTLARAEI
MAV_1972|M.avium_104                LKATGLRNLPCHSFWANAAWLEIVLAAADLVTWARLIGFRAHPGLARAEI
MMAR_3317|M.marinum_M               LKSTGLRNLPCHAFSANAAWQEIILAAADLITWTRLIGFTTQPELARVEI
TH_1997|M.thermoresistible__bu      LKATGLRNLPCHSFWANAAWLEIVLAAADLVTWTRLIGFRNQPGLARAEI
Mvan_5550|M.vanbaalenii_PYR-1       LIDGPLAHMPSGRFGANSAWILCAAIAYNLL---RAVGVLAGGVHAVARG
                                    *    * ::*.  * **:**      * :*:   * :*.      * .. 

MSMEG_0237|M.smegmatis_MC2_155      ATFRYRVLHVAARITRGARQLRLRIDATWRWASAIATAWQHLRTAFG---
Mflv_3048|M.gilvum_PYR-GCK          ATFRYRVLHVAARITRGARQLRLRIDATWRWATSIATAWQTIRTAFG---
MAV_1972|M.avium_104                ATFRYRVLHVAARITRGARQQRLRIDATWRWASAIATAWQHLRTAFG---
MMAR_3317|M.marinum_M               TTFRYRVLHVAARITRGARQVRLCIDATWRWAAMIATAWQAIRTAFG---
TH_1997|M.thermoresistible__bu      NTFRYRVLHVAARITRGARQLRLRIDATWRWAAAIVTAWQHLRTAFG---
Mvan_5550|M.vanbaalenii_PYR-1       ATLRRKFVNIPARLARPQRRAILHLPTHWPWAQQWLTLWRNTIGHSPPTA
                                     *:* :.:::.**::*  *:  * : : * **    * *:          

MSMEG_0237|M.smegmatis_MC2_155      ---
Mflv_3048|M.gilvum_PYR-GCK          ---
MAV_1972|M.avium_104                ---
MMAR_3317|M.marinum_M               ---
TH_1997|M.thermoresistible__bu      ---
Mvan_5550|M.vanbaalenii_PYR-1       ATH