For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MAIPALRRTRLVLAAAAAAGLVLSGCGGVQNTTGGGSGGTYPSGTVEMYVGASAGGSSDLISRAVSKGLS DSLGASFPVINREGANGALAAAEVSKAKPDGSVIAIQNASLFTITPLAVSPGEVTDIDDFDVVYGISRDD YVLVTNPASGYKTMGDLEAATKPVRYGTTGVGTGAQLAAALLFKSADVPSQAVPFDGGAPALTALLGNQI DVAVLQVGEAIENIQSDKLIPLSVFGPERIDYLPEVPTAKEQGLDVEVTQYRFMTVPKGTPQEVRDRIVE GLEATFATDAYKKFNEQNSLTPMEQPGPEVLEQLKADSKRYADLTKEFGIDLRAS
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. smegmatis MC2 155 | MSMEG_0122 | - | - | 100% (335) | putative periplasmic solute-binding protein |
M. smegmatis MC2 155 | MSMEG_4210 | - | 3e-19 | 25.30% (332) | secreted protein |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_2741 | - | 5e-24 | 31.27% (323) | hypothetical protein Mflv_2741 |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. marinum M | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | Mvan_3502 | - | 3e-21 | 28.44% (334) | hypothetical protein Mvan_3502 |
CLUSTAL 2.0.9 multiple sequence alignment Mflv_2741|M.gilvum_PYR-GCK -----MFRS-------ALGAVMAAALVLTGCQ---KSEEPVAAPPYPAGP Mvan_3502|M.vanbaalenii_PYR-1 MIGDDMFASSRRGTLIGLTIAVIAALLLTGCG---VTRGEQTG----LHR MSMEG_0122|M.smegmatis_MC2_155 -----MAIPALRRTRLVLAAAAAAGLVLSGCGGVQNTTGGGSGGTYPSGT * . * . *.*:*:** : :. Mflv_2741|M.gilvum_PYR-GCK VTMTAGANPGSGFDITIRAVVEALETEKLVTVPLPVQNKPGNIGADFLAS Mvan_3502|M.vanbaalenii_PYR-1 LRMMVPNSPGGGYDLTARTAVKIMEDDEITGR-VEVFNVIGAGGTVAMAR MSMEG_0122|M.smegmatis_MC2_155 VEMYVGASAGGSSDLISRAVSKGLSDS--LGASFPVINREGANGALAAAE : * . ..*.. *: *:. : :. . . * * * *: * Mflv_2741|M.gilvum_PYR-GCK MVEQYQGRDDQVSVTSLSMMMNQLRGLSP---YGYDDVTMIARLITEYYV Mvan_3502|M.vanbaalenii_PYR-1 LMNE-QGNGDLMMMMGLGVVGATFTNGSK---ARASDATALAKMVEEQEG MSMEG_0122|M.smegmatis_MC2_155 VSKA-KPDGSVIAIQNASLFTITPLAVSPGEVTDIDDFDVVYGISRDDYV : : : .. : : . .:. * .* : : : Mflv_2741|M.gilvum_PYR-GCK VVTDAQSPYRTLADVMTAIRSDPGRVQIAAATDDQAPFDLL----VAAAG Mvan_3502|M.vanbaalenii_PYR-1 ILVPADSPFTTVQDFVAAWKADPAKVTIGGGSNPGGPDHLFPMETARAVG MSMEG_0122|M.smegmatis_MC2_155 LVTNPASGYKTMGDLEAATKPVRYGTTGVGTGAQLAAALLFK-------- ::. . * : *: *. :* :. . . .. *: Mflv_2741|M.gilvum_PYR-GCK GDPAALDYVAFEGGGDQTEALLNSGISVAVGGVSEFVDLVRSGELRALGV Mvan_3502|M.vanbaalenii_PYR-1 VDPTKVNFVSYDGGGDLLTALLGNKIAAGTSGLGEYVDQIESGQVRVLAV MSMEG_0122|M.smegmatis_MC2_155 SADVPSQAVPFDGGAPALTALLGNQIDVAVLQVGEAIENIQSDKLIPLSV . : *.::**. ***.. * ... :.* :: :.*.:: *.* Mflv_2741|M.gilvum_PYR-GCK LSEERLPGL-DVPTAREQNLDVTLSNWRGLYGPPGMPAGAVSYWQEVLAE Mvan_3502|M.vanbaalenii_PYR-1 SGEERVEGV-DAPTLTEAGIDLTFTNWRGVIAPPGISDQDRAAMVKVLEE MSMEG_0122|M.smegmatis_MC2_155 FGPERIDYLPEVPTAKEQGLDVEVTQYRFMTVPKGTPQEVRDRIVEGLEA . **: : :.** * .:*: .:::* : * * . : * Mflv_2741|M.gilvum_PYR-GCK MVNTPTWNQIAERNQFTTTFMVGDELQTFLADTQADLAAALAQA------ Mvan_3502|M.vanbaalenii_PYR-1 LHATEAWKEALVKNGWSDAFMTGEPFEEFLTEQDKRVETTLTDLGLV--- MSMEG_0122|M.smegmatis_MC2_155 TFATDAYKKFNEQNSLTPMEQPGPEVLEQLKADSKRYADLTKEFGIDLRA * :::: :* : * . * . : Mflv_2741|M.gilvum_PYR-GCK - Mvan_3502|M.vanbaalenii_PYR-1 - MSMEG_0122|M.smegmatis_MC2_155 S