For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MKEFVMLPLTNPAPTTAERIRSACARAGGALLAVERDGPVATPIHHLMPDGSFAVAVPIEHPGAGTGDPG QPPSQALLELTDYAPLPVREPVRSLVWIRGRLHPVPADMIGATLDLIATENPNPALLQVQTPRSAPAHGA EIRYALLRLEIESVVVTDATGAEPISVVDLLAARPDPFCEIESSLLRHLTTDHQDVVARLVSRLPAPLRR GEVRPLGLDRYGVRFRIESNDGDRDIRLPFHRPVDDMHGLRQAIRVLLGCPFGNGLRARR
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_5391 | - | - | 100% (270) | hypothetical protein MMAR_5391 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb3869 | - | 1e-114 | 78.11% (265) | hypothetical protein Mb3869 |
| M. gilvum PYR-GCK | Mflv_1144 | - | 7e-83 | 59.09% (264) | hypothetical protein Mflv_1144 |
| M. tuberculosis H37Rv | Rv3839 | - | 1e-113 | 77.74% (265) | hypothetical protein Rv3839 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_0131c | - | 1e-70 | 52.26% (266) | hypothetical protein MAB_0131c |
| M. avium 104 | MAV_0187 | - | 1e-99 | 70.15% (268) | hypothetical protein MAV_0187 |
| M. smegmatis MC2 155 | MSMEG_6419 | - | 3e-92 | 66.02% (259) | hypothetical protein MSMEG_6419 |
| M. thermoresistible (build 8) | TH_1471 | - | 4e-76 | 60.17% (241) | CONSERVED HYPOTHETICAL PROTEIN |
| M. ulcerans Agy99 | MUL_5012 | - | 1e-148 | 96.24% (266) | hypothetical protein MUL_5012 |
| M. vanbaalenii PYR-1 | Mvan_5663 | - | 6e-88 | 63.12% (263) | hypothetical protein Mvan_5663 |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_5391|M.marinum_M MKEFVMLPLTNPAPTTAERIRSACARAGGALLAVERDGPVATPIHHLMPD
MUL_5012|M.ulcerans_Agy99 ----MMLPLTSPAPTTAERIRSACARAGGALLAVERDGPVATPIHHLMPD
Mb3869|M.bovis_AF2122/97 -----MPPLTSLAPTTAERIRSACARAGGALLVVEREDPVPVPIHHLLYD
Rv3839|M.tuberculosis_H37Rv -----MPPLTSLAPTTAERIRSACARAGGALLVVEREDPVPVPIHHLLYD
MAV_0187|M.avium_104 -----MLPQTCPAPSTAERIRSACVRAGGALLAIEHDDPVPTPVHHLIGA
Mflv_1144|M.gilvum_PYR-GCK ----MASPAPTAAPTTAERIRSACVRPGGAMIAAEGLDPSTTSVHHLLGD
Mvan_5663|M.vanbaalenii_PYR-1 ----MASPAPTSAPTTAERIRSACARSGGAMLAVEGLDPTTTPVHHLLDD
MSMEG_6419|M.smegmatis_MC2_155 --------MAVAAPTTAERIRSACARGGGAMLAVEGIEPLATPVHHLLQD
TH_1471|M.thermoresistible__bu ------------------------------MLAVEGIEPVATPVHHLLED
MAB_0131c|M.abscessus_ATCC_199 --------MTAAPPTTAERVRSACARAASSTLAVAGADVVGTSLHHLFDD
:. ..:***:
MMAR_5391|M.marinum_M ----GSFAVAVPIEHPGAGTGD-PGQPPSQALLELTDYAPLPVREPVRSL
MUL_5012|M.ulcerans_Agy99 ----GTFAVAVPIEHPGAGAGD-PGQPPSQAFLELTDYTPLPVREPVRSL
Mb3869|M.bovis_AF2122/97 ----GSFAVAVPVDR-GEVSG-------SQALLELTDYAPLPVREPVRSL
Rv3839|M.tuberculosis_H37Rv ----GSFAVAVPVDR-GEVSG-------SQALLELTDYAPLPVREPVRSL
MAV_0187|M.avium_104 GPFAGSFSLALPVEREHRLRPV-AG---APALLELTDYAPLPLREPVRSL
Mflv_1144|M.gilvum_PYR-GCK ----GSVAITVPVDGPLVASVASAGNAGIQAVLEMTDYAPLPLREPVRSL
Mvan_5663|M.vanbaalenii_PYR-1 ----GSFAITVPCDGSLVATVVSAGNAGVQAVLEMTDYAPLPLREPVRSL
MSMEG_6419|M.smegmatis_MC2_155 ----GSFAITVPENGPLVGTVVSSGSAGIQAVLEMTDYAPLPLREPVRSL
TH_1471|M.thermoresistible__bu ----GSVAITAPVDGPLNARVVAAGAGGIQAVLELTDYAPVPLREPVRAL
MAB_0131c|M.abscessus_ATCC_199 ----GTFAVAVPSDSAIAATVVAAGSAGMPALLELTDQAPLPLREPVRSL
*:.::: * : *.**:** :*:*:*****:*
MMAR_5391|M.marinum_M VWIRGRLHPVPADMIGATLDLIATENPNPALLQVQTPRSAPAHGAEIRYA
MUL_5012|M.ulcerans_Agy99 VWIRGRLRPVPADMIGAALDLIATENPNPALLQVQTPRSAPAHGAEIRYA
Mb3869|M.bovis_AF2122/97 VWIRGCLHQIPPAELVETLDLIATDNPNPALLQVETPRSGPADAAETRYT
Rv3839|M.tuberculosis_H37Rv VWIRGCLHQIPPAELVETLDLIATDNPNPALLQVETPRPGPADAAETRYT
MAV_0187|M.avium_104 VWVRGRLHEVDPAQILETLDVIAAECPHPALLGVDTPRR--ADGTEPRYV
Mflv_1144|M.gilvum_PYR-GCK VWIQGVLRDVPTAEVPALLDLIAAADPNPALLQVNPGPE------ETPHA
Mvan_5663|M.vanbaalenii_PYR-1 VWIQGRLRDVPIGEVPALLDLIASTEPNPALLQVNSGSSQ--GEGDTRLA
MSMEG_6419|M.smegmatis_MC2_155 VWIRGRLQHVPNGEVADLLDLVATENPNPALLQVNSSPID---DADDTYA
TH_1471|M.thermoresistible__bu VWIRGRLVRVPSGQSAELLDTIAAENPNPALLQVNSDAAG--GDGEPAAT
MAB_0131c|M.abscessus_ATCC_199 VWVRGNVVAASDREARGIVDVIASRIPDPALLDIRTDMR---LRTEPGSV
**::* : :* :*: *.**** : . : .
MMAR_5391|M.marinum_M LLRLEIESVVVTDATGAEPISVVDLLAARPDPFCEIESSLLRHLTTDHQD
MUL_5012|M.ulcerans_Agy99 LMRLEIESVVVTDSTGAEPISVVDLLAARPDPFCEIESSLLRHLTTDHQD
Mb3869|M.bovis_AF2122/97 MQRLEIESVVVTDATGAEPVTVADLLAARPDPFCEIESTLLWHLATAHDD
Rv3839|M.tuberculosis_H37Rv MQRLEIESVVVTDATGAEPVTVADLLAARPDPFCEIESTLLWHLATAHDD
MAV_0187|M.avium_104 LRRLEIASVVVTDATGAEPVDVADLLAARPDPFCALESDLLWHLDTAHGD
Mflv_1144|M.gilvum_PYR-GCK LMRLEIESVVVADSTGAESVALGELLGARPDPFCAMESCWLKHMESAHRD
Mvan_5663|M.vanbaalenii_PYR-1 LMRLEIESVVVADATGAESVALSALLGARPDPFCGMESCWLQHMESAHRD
MSMEG_6419|M.smegmatis_MC2_155 LLRLEIESIVVADSTGAESVTVGALLAARPDPFCAMESSWLQHMESAHRD
TH_1471|M.thermoresistible__bu LLRLRIDSVVAADSTGAEAVPVDALLAARPDPFCTMESTWLQHLEVAHRE
MAB_0131c|M.abscessus_ATCC_199 LLCLTVESVVVADSTGAESVDVSALLSARPDPFCALEAGWLSHIDHDHRD
: * : *:*.:*:****.: : **.******* :*: * *: * :
MMAR_5391|M.marinum_M VVARLVSRLPAPLRRGEVRPLGLDRYGVRFRIESNDGDRDIRLPFHRPVD
MUL_5012|M.ulcerans_Agy99 VVARLVSRLPAPLRRGEVRPLGLDRYGVRFRIESNDGDRDIRLPFHRPVD
Mb3869|M.bovis_AF2122/97 VVARLVSRLPAPLRRGQIRPLGLDRYGVRFRIEARDGDRDIRLPFHKPVD
Rv3839|M.tuberculosis_H37Rv VVARLVSRLPAPLRRGQIRPLGLDRYGVRFRIEARDGDRDIRLPFHKPVD
MAV_0187|M.avium_104 VVSRLVSRLPAPLRRGQVRPLGLDRYGVRFRVEGNDRDHDVRLPFHKPVD
Mflv_1144|M.gilvum_PYR-GCK VVDRLAARLPASLRQGRVRPLALDRYGVQLRVEGADGDHDVRLPFGKPVD
Mvan_5663|M.vanbaalenii_PYR-1 VVDRLAARLPASLRRGRVRPLGLDRYGVQLRVEGADGDHDVRLPFAHPVD
MSMEG_6419|M.smegmatis_MC2_155 VVDRLATRLPVALRQGRVRPLGLDRYGVQLRVENENGDHDVRLPFPAPVD
TH_1471|M.thermoresistible__bu VVDRLASRLPVALRRGRVRPLGLDRYGVQLRVEADTGDHDVRLPFNQPVD
MAB_0131c|M.abscessus_ATCC_199 LVERLARRLPLNLQHGEVRLLGIDRYGIQLRVEGAESDHDVRLPFNEPVN
:* **. *** *::*.:* *.:****:::*:* *:*:**** **:
MMAR_5391|M.marinum_M DMHGLRQAIRVLLGCPFGNGLRARR-
MUL_5012|M.ulcerans_Agy99 DMHGLRQAIRVLLGCPFGNGLRAGR-
Mb3869|M.bovis_AF2122/97 DMTGLSQAIRVLMGCPFRNGLRARR-
Rv3839|M.tuberculosis_H37Rv DMTGLSQAIRVLMGCPFRNGLRARR-
MAV_0187|M.avium_104 DMTGLSQAIRVLMGCPFINGLRARG-
Mflv_1144|M.gilvum_PYR-GCK DVTSLSRAIRVLMGCPFLNGLRARGV
Mvan_5663|M.vanbaalenii_PYR-1 DVTGLSQAIRVLMGCPFLNGLRARGA
MSMEG_6419|M.smegmatis_MC2_155 DVPGLSKAIRVLMGCPFLNGLRARRL
TH_1471|M.thermoresistible__bu DVTGLSRAIRILMGCPFLNGLRARRP
MAB_0131c|M.abscessus_ATCC_199 DTAGLSQALRILAGCPFLNGLRARKI
* .* :*:*:* **** *****