For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
LTGGLRDILSPSRLTHIVDVGASRSCGDWPYTAMLNAGLCHLTGFEPGPEALLELQRTRGPNESYLPYAL GDGTPQTLQVCPPPGGMTSLLEPDPTTQGLFTLFDPFGKVIERLPIQTHRLDDIGEIEHLDLLKIDIQGG ELAVFQNGREKLAEAVAVQTEVSFITLYRDQPSFGDVDLELRSQGFVPHCIPNAVKRWVIGDFVVGGSPS RPLNQILETDIVYVRNFFDPDAMTAEQLKHLAMISHHCYGSFDLAFRCVQLLQARGAVGTASAQRYLDIY RRAVRHKSALWRAQNGATRLKHRLRASAAKWTRSPGRGR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_4509 | - | - | 100% (319) | hypothetical protein MMAR_4509 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2980 | - | 2e-06 | 27.38% (168) | hypothetical protein Mb2980 |
M. gilvum PYR-GCK | Mflv_5092 | - | 1e-97 | 59.86% (279) | FkbM family methyltransferase |
M. tuberculosis H37Rv | Rv2956 | - | 2e-06 | 27.38% (168) | hypothetical protein Rv2956 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_4680 | - | 0.0 | 97.81% (319) | hypothetical protein MUL_4680 |
M. vanbaalenii PYR-1 | Mvan_1263 | - | 1e-103 | 64.84% (273) | FkbM family methyltransferase |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_4509|M.marinum_M --------------------------MTGGLRDILSPSRLTHIVDVGASR MUL_4680|M.ulcerans_Agy99 --------------------------MTGGLRDILSPSRLTHIVDVGASR Mflv_5092|M.gilvum_PYR-GCK --------------------------MTTAFRDLLGPQRLTDVVDIGANP Mvan_1263|M.vanbaalenii_PYR-1 --------------------------MITAFRDLLAPSRLTDVVDVGANP Mb2980|M.bovis_AF2122/97 MKSLKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGAN- Rv2956|M.tuberculosis_H37Rv MKSLKLARFIARSAAFEVSRRYSERDLKHQFVKQLKSRRVDVVFDVGAN- : : . * . *: :.*:**. MMAR_4509|M.marinum_M SCGDWPYTAMLNAGLCHLTGFEPG--PEALLELQRTRGPNESYLPYALGD MUL_4680|M.ulcerans_Agy99 SCGDWPYTAMLNAGLCHLTGFEPG--PEALLELQRTRGPNESYLPYALGD Mflv_5092|M.gilvum_PYR-GCK IDGEPPYSPMLTEGLCRVTGFEPQ--PEALHDLQSRKGPYERYLPYAVGD Mvan_1263|M.vanbaalenii_PYR-1 IDGEPPYAPMLSAGLCRVTGFEPQ--PDALAELQTRKGPGERYLPYAVGD Mb2980|M.bovis_AF2122/97 -SGQYAAGLRRAAYKGRIVSFEPLSGPFTILESKASTDPLWDCRQHALGD Rv2956|M.tuberculosis_H37Rv -SGQYAAGLRRAAYKGRIVSFEPLSGPFTILESKASTDPLWDCRQHALGD *: . ::..*** * :: : : .* :*:** MMAR_4509|M.marinum_M G-TPQTLQVCPPPGGMTSLLEPDPTTQGLFTLFDPFGKVIERLPIQTHRL MUL_4680|M.ulcerans_Agy99 G-TPQTLQVCPPPGGMTSLLEPDPTTQGLFTLFDPFGKVIERLPIQTHRL Mflv_5092|M.gilvum_PYR-GCK G-SEHTLNICRGSG-MTSLFEPDPATLGLFEILGPYAEVVDRVALPTQRL Mvan_1263|M.vanbaalenii_PYR-1 G-GEHTLNICRASG-MTSLFEPDPDTLNLFEVLEPYGEVLERIPLSTHRL Mb2980|M.bovis_AF2122/97 SDGTVTINIAGNAGQSSSVLPMLKSHQNAFPPANYVGTQEASIHRLDSVA Rv2956|M.tuberculosis_H37Rv SDGTVTINIAGNAGQSSSVLPMLKSHQNAFPPANYVGTQEASIHRLDSVA . *:::. .* :*:: . * . : MMAR_4509|M.marinum_M DDIGEIEHLDLLKIDIQGGELAVFQNGREKLAEAVA-VQTEVSFITLYRD MUL_4680|M.ulcerans_Agy99 DDIGEIEHLDLLKIDIQGGKLAVFQNGREKLAEAVA-VQTEVSFITLYRD Mflv_5092|M.gilvum_PYR-GCK DEVAEIEHLDFLKIDIQGGELAVFCNGREKLADAVV-IQTEVSFVTLYKD Mvan_1263|M.vanbaalenii_PYR-1 DDISEIEHLDFLKIDIQGGELAVFQNGRTKLADAVA-IQTEVSFVTLYRD Mb2980|M.bovis_AF2122/97 PEFLGMNGVAFLKVDVQGFEKQVLAGGKSTIDDHCVGMQLELSFLPLYEG Rv2956|M.tuberculosis_H37Rv PEFLGMNGVAFLKVDVQGFEKQVLAGGKSTIDDHCVGMQLELSFLPLYEG :. :: : :**:*:** : *: .*: .: : . :* *:**:.**.. MMAR_4509|M.marinum_M QPSFGDVDLELRSQGFVPHCIPNAVKRWVIGDFVVGGSPSRPLNQILETD MUL_4680|M.ulcerans_Agy99 QPRFGDVDLELRSQGFVPHCIPNAVKRWVIGDFVVGGSPSRPLNQILETD Mflv_5092|M.gilvum_PYR-GCK QPAMGAIDVELRSQGFIPHCFA-AVKHWPIAPYVVEGNPRQAVNQLLEAD Mvan_1263|M.vanbaalenii_PYR-1 QPTMGDVDVEMRSQGFVPHCFA-AVKKWPIAPYVVNNNPRWALNQLLEAD Mb2980|M.bovis_AF2122/97 GMLIPEALDLVYSLGFT--------LTGLLPCFIDANN-----GRMLQAD Rv2956|M.tuberculosis_H37Rv GMLIPEALDLVYSLGFT--------LTGLLPCFIDANN-----GRMLQAD : : * ** : :: .. .::*::* MMAR_4509|M.marinum_M IVYVRNFFDPDAMTAEQLKHLAMISHHCYGSFDLAFRCVQLLQARGAVGT MUL_4680|M.ulcerans_Agy99 IVYVRDFFDPDAMTAEQLKHLAMISHHCYGSFDLAFRCVQLLQARGAVGP Mflv_5092|M.gilvum_PYR-GCK IVYVRDFSRPDSLSDEQLKHLALIAHHCYGSVDLALRCVMLLEDRGSIEV Mvan_1263|M.vanbaalenii_PYR-1 IVYVRDFSRPDSLSDEQLKHLALIAHHCYSSYDLALRCVMLLERRGSLKT Mb2980|M.bovis_AF2122/97 GTFFREDD------------------------------------------ Rv2956|M.tuberculosis_H37Rv GIFFREDD------------------------------------------ :.*: MMAR_4509|M.marinum_M ASAQRYLDIYRRAVRHKSALWRAQNGATRLKHRLRASAAKWTRSPGRGR MUL_4680|M.ulcerans_Agy99 PSAQRYLDIYRRAVRHKSALWRAQNAASRLKHRLRASAAKWTRSPGRGR Mflv_5092|M.gilvum_PYR-GCK GARQRYSEILTAS------------------------------------ Mvan_1263|M.vanbaalenii_PYR-1 GAQQSYLETRPA------------------------------------- Mb2980|M.bovis_AF2122/97 ------------------------------------------------- Rv2956|M.tuberculosis_H37Rv -------------------------------------------------