For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTEPTVPSSVVPSVPVARLAQAFSIQLICRILGMLASVVSVMLTARYLGPGRYGQLTIAVAFIGMWASLV DLGIGRVIVRRVASSPDDLERLVRIYNGLSLLYCVPLTLVAAGSGLLVYQDRDVRAMLVVLSCQLLIVTM LTRLEPVFLVTVRFTAVAVSDVVGRLATLGVISFLVASRADVIWFAVPQLIQTGLQLLIQSRAASRRVSL RPILALREAADLLRESLFPMGVTVITVLYWRVDGVILSLLNTHSEVGVYGLASSIAINTLVLSVFFLKST LSTATELYSRDLAAFAGFMRRSVELMYFLAVPIAVVGVLVAQPLIRLLGSQAFVSRGTPTLALLFIAVGL RFIATTLGEGLFASHSQRFWFWLSVATLALNIVLNVTLDGRFGAVGAGIALVCTELFNMTIASWWLHRQC DYRTPVLFLLRLSVPTAASVAMVLLLAGHHVIVVLAAAAVAYLAINAAIGPLTWSTMASLRPNSQPKQLT P
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_4504 | - | - | 100% (491) | hypothetical protein MMAR_4504 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_1495 | - | 1e-12 | 22.20% (473) | polysaccharide biosynthesis protein |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. avium 104 | - | - | - | - | - |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | TH_3825 | - | 3e-06 | 26.15% (283) | PUTATIVE putative Na+/solute symporter |
M. ulcerans Agy99 | MUL_4675 | - | 0.0 | 94.30% (491) | hypothetical protein MUL_4675 |
M. vanbaalenii PYR-1 | Mvan_5251 | - | 7e-11 | 23.17% (423) | polysaccharide biosynthesis protein |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_4504|M.marinum_M MTEPTVPSSVVPSVPVARLAQAFSIQLICRILGMLASVVSVMLTARYLGP MUL_4675|M.ulcerans_Agy99 MTEPTAPSPVVPSVPVARLAQAFSIQLICRILGMLASVVSVMLTARYLGP Mflv_1495|M.gilvum_PYR-GCK -MTGSEPEGARPAPEAPSTARQTAWNYLVFALSKSSTLLMTIVVARILSP Mvan_5251|M.vanbaalenii_PYR-1 ---------------MPSTGRQTAWNYLIFALSKSSTLLMTIVVARILSP TH_3825|M.thermoresistible__bu ----------MILTGVAVFLLVLTVSGVVSARRVRGDCANYLVAGRALP- . : . : . ::..* * MMAR_4504|M.marinum_M GRYGQLTIAVAFIGMWASLVDLGIGRVIVRRVASSPDDLERLVRIYNGLS MUL_4675|M.ulcerans_Agy99 GRYGQLTVAVAFIGMWASLVDLGIGRVIVRRVTSSPDDLERLVRIYNGLS Mflv_1495|M.gilvum_PYR-GCK TEFGIFALAILVVNLFDYVKDLGVGSALVQNRRDWR-VLAPTGLTLSVLF Mvan_5251|M.vanbaalenii_PYR-1 TEFGIFALAVLVVNLFDYVKDLGVAAALVQNRREWR-ILAPTGLTLSVLF TH_3825|M.thermoresistible__bu ---AVLVAAVLIAQPVDSNATIGNADLSAAFGFWAGAALPIGLALCLLLM . :. *: . :* . . * * MMAR_4504|M.marinum_M LLYCVPLTLVAAGSGLLVYQDRDVRAMLVVLSCQLLIVTMLTRLEPVFLV MUL_4675|M.ulcerans_Agy99 LVYCIPLTLVAAGSGLLVYHDHEVRAMLVVLSCQLLIVAMLTRLEPVFLV Mflv_1495|M.gilvum_PYR-GCK GLFASGVLAATAGVAARALGEPELTELIRVLAVGLAISALSTIPAAWLRR Mvan_5251|M.vanbaalenii_PYR-1 GLGASGVLAATAGVAARALGQPELTGLIRILAVGLAISALSTIPAAWLRR TH_3825|M.thermoresistible__bu GLFFARRLRAAQVVTLPEYFGNRFGRGVEVASSALTVGSFAILLAGNLVA : .: . : : : * : :: : MMAR_4504|M.marinum_M T----VRFTAVAVSDVVGRLATLGVISFLVASRADVIWFAVPQLIQ--TG MUL_4675|M.ulcerans_Agy99 T----VRFTAVAVSDVVGRLATLGVISFLVASRPDVIWFAVPQLIQ--TA Mflv_1495|M.gilvum_PYR-GCK S----MNFSARLLPEFAGAVAKTGLTIGLAAAGYGVWSLAYGQLAA--SV Mvan_5251|M.vanbaalenii_PYR-1 S----MNFSARLMPEFAGAATKTGLTIGLAAAGFGVSSLAYGQLAA--VV TH_3825|M.thermoresistible__bu IGFLLERFLGVSYTIGILVTVPLALLYTITGGMFASVYTGVAQVVVNIVG .* . . . .: :... . *: MMAR_4504|M.marinum_M LQLLIQSRAASRRVSLRPILALREAADLLR--ESLFPMGVTVITVLYWRV MUL_4675|M.ulcerans_Agy99 LQLLIQSRAASQRVRLRPILALREAADLLR--ESLFPMGVTVITVLYWRV Mflv_1495|M.gilvum_PYR-GCK IMTILYWRVARVRPRFA--FDGPVCRELVR--FGVPVTAVTLLAYAIYNV Mvan_5251|M.vanbaalenii_PYR-1 VMTVLYWRVAHIRPSLG--FDSRVCRELIR--FGLPVTAVTLLAYAIYNV TH_3825|M.thermoresistible__bu VFALVVWVAATHGFTAPDGMGAGALSQLTSSESGAVINWATIIALGLGNL : :: .* : :* . .*::: .: MMAR_4504|M.marinum_M DGVILSLLNTHS-EVGVYGLASSIAINTLVLSVFFLKSTLSTATELYSRD MUL_4675|M.ulcerans_Agy99 DGVILSLLNTHS-EVGVYGLASSIALNTLVLSVFFLKSTLSTATELYSRD Mflv_1495|M.gilvum_PYR-GCK DYLAVGERLGAT-ELGLYSMAYRIPELLVLSLCVVISEVLFSALSGLQDD Mvan_5251|M.vanbaalenii_PYR-1 DYLAIGERLGAT-ELGLYTMAYRIPELLVLSLCVVVSEVLFSALSGLQDD TH_3825|M.thermoresistible__bu VAIDLMQRVFSARDPGAAQRACFAAAGGILLLCLPLSFVALAAVGIVGDS : : : : * * . :: . :. . :* . MMAR_4504|M.marinum_M LAAFAGFMRRSVELMYFLAVPIAVVGVLVAQPLIRLLGSQAFVSRGTPTL MUL_4675|M.ulcerans_Agy99 LAAFAGFIRRSVELMYFLVVPIAVVGVLVAQPLIRLLSSQAFVSRGTPTL Mflv_1495|M.gilvum_PYR-GCK RDALTGHYLQALTVVAALTIPIGIGLAVAAQPAVGTLYGSAYAES-APIL Mvan_5251|M.vanbaalenii_PYR-1 RDALTGHYMQALTVVAALTFPIGVGLAVAAQPLVGTLYGVDYAGS-APIL TH_3825|M.thermoresistible__bu AGDGPILYALLGEYAPAWLAIIVISGLLAAT--LTTVSGILLSTASVLVR . * : :.* : : . . MMAR_4504|M.marinum_M ALLFIAVGLRFIATTLGEGLFASHSQRFWFWLSVATLALNIVLNVTLDGR MUL_4675|M.ulcerans_Agy99 ALLFIAVGLRFIATTLGEGLFASHSQRFWFWLSVATLTLNIVLNLALDGR Mflv_1495|M.gilvum_PYR-GCK SVLAIYATVYSASFHAGDVFKAIGRPGILTAINAGKLAVLVGP-IWWAAG Mvan_5251|M.vanbaalenii_PYR-1 SVLAIYTALYSASFHAGDVFKAIGRPGILTAINAGKLAVLVVP-IWWAAG TH_3825|M.thermoresistible__bu NVLRIDTGVLAPPAAMTPRMLRATR---WATLPMAALAAVVALRVPQTGI :* * . : . : : . *: : : . MMAR_4504|M.marinum_M FGAVGAGIALVCTELFNMTIASWWLHRQCDYRTPVLFLLRLSVPTAASVA MUL_4675|M.ulcerans_Agy99 LGAVGAGIALVCTELFNMTIASWWLHRQCGYHTPVLFLLRLSVPTAASVA Mflv_1495|M.gilvum_PYR-GCK HSALAVAVALLSVEGLHFLVRMTVLCRLTR-TSWSSIAGALCRPAAAAVP Mvan_5251|M.vanbaalenii_PYR-1 HSALMVAFALLGVEALHFLVRMTVLHRLMG-TSWLSIAGALCRPAAAAVP TH_3825|M.thermoresistible__bu LLTLAFDLLLASLVVPFILGLYWSRGGAAAAAAAVVVGIGVRLTYFVLAP :: . * : : . : . . .. MMAR_4504|M.marinum_M MVLLLAG------------HHVIVVLAAAAVAYLAINAAIGPLTWSTMAS MUL_4675|M.ulcerans_Agy99 VVLPLAG------------HHVIVVLAAAAVAYLAINAAIGPLTWSTMAS Mflv_1495|M.gilvum_PYR-GCK MGLVLVGVGHVIDGLADPLELALMVVVGLCVYVLILRFTAAQLVKAAFEM Mvan_5251|M.vanbaalenii_PYR-1 MGLVLLGLARVTDGLADPLELVVLAFVGLCVYVLILRFTAAQLVKAAFGM TH_3825|M.thermoresistible__bu TIYGVDN--------------TLLYLPNDWVSAXXRGGGPSGVRDTPSDT : . .:: . * . : :. MMAR_4504|M.marinum_M LRPNSQPKQLTP-------- MUL_4675|M.ulcerans_Agy99 LRPNAQPEQLTP-------- Mflv_1495|M.gilvum_PYR-GCK VRARLSRSAATPATTKEDL- Mvan_5251|M.vanbaalenii_PYR-1 VRQRLSRSTAASATTAKEGP TH_3825|M.thermoresistible__bu PREMHPRNALA--------- * . :