For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
DIFAGCAAQDLMPLAARLAPLRAAAGQILMRQGEQAVSFLLISSGSAEVIHVGDDGVVIVEQALPGMIVG EIALLRNVPRTATVTTVEPLTGWIGGTDAFDLMVHIPGIMDRLVRTVRQRLAAFITPIPVPLRDGTQLML RPVLPGDSERTVHGHVHFSSETIYRRFMSARVPDLAMMHYLSEVDYVDHFVWVMVDGSDPVADARFIRDS VDPTVAEIAFTVADAYQGKGIGSFLIGALAVAARVDGVARFSARMLADNLPMRTIMDRHGAVWQREDVGV ITTVIDVPGPRDLGFGREMAGQIRRVARQVIEAVS*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_4496 | - | - | 100% (316) | hypothetical protein MMAR_4496 |
| M. marinum M | MMAR_1306 | - | 5e-07 | 28.69% (122) | transmembrane transport protein |
| M. marinum M | MMAR_0333 | - | 7e-06 | 37.50% (88) | hypothetical protein MMAR_0333 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1025 | - | 1e-145 | 79.68% (315) | hypothetical protein Mb1025 |
| M. gilvum PYR-GCK | Mflv_1915 | - | 1e-105 | 60.95% (315) | cyclic nucleotide-binding protein |
| M. tuberculosis H37Rv | Rv0998 | - | 1e-145 | 79.68% (315) | hypothetical protein Rv0998 |
| M. leprae Br4923 | MLBr_00187 | - | 1e-125 | 72.06% (315) | hypothetical protein MLBr_00187 |
| M. abscessus ATCC 19977 | MAB_1554 | - | 4e-87 | 52.05% (317) | cyclic nucleotide-binding protein |
| M. avium 104 | MAV_1121 | - | 1e-144 | 78.73% (315) | cyclic nucleotide-binding protein |
| M. smegmatis MC2 155 | MSMEG_5458 | - | 1e-102 | 57.86% (318) | cyclic nucleotide-binding protein |
| M. thermoresistible (build 8) | TH_0935 | - | 1e-101 | 58.36% (317) | CONSERVED HYPOTHETICAL PROTEIN |
| M. ulcerans Agy99 | MUL_4667 | - | 1e-176 | 98.73% (316) | hypothetical protein MUL_4667 |
| M. vanbaalenii PYR-1 | Mvan_4818 | - | 1e-108 | 61.71% (316) | cyclic nucleotide-binding protein |
CLUSTAL 2.0.9 multiple sequence alignment
Mflv_1915|M.gilvum_PYR-GCK --------------------------MTAVRADDLAGLAVFDGIAIEALV
Mvan_4818|M.vanbaalenii_PYR-1 -----------------------MSGLTAVRADDLAALTVFDGISVEALV
MSMEG_5458|M.smegmatis_MC2_155 -----------------------MAELTEVRAADLAALEFFTGCRPSALE
MMAR_4496|M.marinum_M -------------------------------------MDIFAGCAAQDLM
MUL_4667|M.ulcerans_Agy99 MDG--------------------MAEVTGAWVGELAGMDIFAGCAAQDLM
Mb1025|M.bovis_AF2122/97 MDG--------------------IAELTGARVEDLAGMDVFQGCPAEGLV
Rv0998|M.tuberculosis_H37Rv MDG--------------------IAELTGARVEDLAGMDVFQGCPAEGLV
MAV_1121|M.avium_104 -----------------------MAGLTGARADELATMDIFAGCPAEDLA
MLBr_00187|M.leprae_Br4923 MAGSWQCGHCESCASPLGPRDIAVVELIADRAEEFAAMDIFRGLPAEDLM
TH_0935|M.thermoresistible__bu -----------------------MTKVTTANAENLAGLELFAGYDGEALR
MAB_1554|M.abscessus_ATCC_1997 ----------------MHIVDRAWPGAVGVDAAELAELEFFAGSSTGALA
: .* * *
Mflv_1915|M.gilvum_PYR-GCK PLAAQLRPLTAVAGQVLMQQGELAVSFLLIGSGRAEVTHTGEDGHDTVAV
Mvan_4818|M.vanbaalenii_PYR-1 PLAAQLRPLTAAAGQVLMQQGELAVSFLLIGSGRAEVVHGGDDGHDTVAE
MSMEG_5458|M.smegmatis_MC2_155 PLATQLRPLKAEPGQVLIRQGDPALTFMLIESGRVQVSHAVADGPPIVLD
MMAR_4496|M.marinum_M PLAARLAPLRAAAGQILMRQGEQAVSFLLISSGSAEVIHVGDDGVVIVEQ
MUL_4667|M.ulcerans_Agy99 PLAARLAPLRAAAGQILMRQGEQAVSFLLISSGSAEVIHVGDDGVVIVEQ
Mb1025|M.bovis_AF2122/97 SLAASVQPLRAAAGQVLLRQGEPAVSFLLISSGSAEVSHVGDDGVAIIAR
Rv0998|M.tuberculosis_H37Rv SLAASVQPLRAAAGQVLLRQGEPAVSFLLISSGSAEVSHVGDDGVAIIAR
MAV_1121|M.avium_104 PLARRLRPLRAPAGQVLMRQGEQAVEFLLISSGSAEVKHVGDDGVVITEH
MLBr_00187|M.leprae_Br4923 SVAVSVEPVLAAAGEVLMQQGEQAVSFLLISSGNVEVRRVDDDGAVIVGQ
TH_0935|M.thermoresistible__bu PLAALLRPLTAEPGTVLMHQGEPAVHFLLIGSGRVEITHTGPDGAVVVTE
MAB_1554|M.abscessus_ATCC_1997 PLAGLLSPLRAAAGAVLMRQREPADWFLLVGSGSGEVIHAGNGGSSVVAH
.:* : *: * .* :*::* : * *:*: ** :: : .*
Mflv_1915|M.gilvum_PYR-GCK LEPGLIVGEIALLRDAARTATVVATEPLTGWVGGREAFATMLDVPGMMDK
Mvan_4818|M.vanbaalenii_PYR-1 LTAGLIVGEIALLRDAPRTATVVATEPLTGWVGGREAFATMLDVPGMMDR
MSMEG_5458|M.smegmatis_MC2_155 IEPGLIIGEIALLRDAPRTATVVAAEPVIGWVGDRDAFDTILHLPGMFDR
MMAR_4496|M.marinum_M ALPGMIVGEIALLRNVPRTATVTTVEPLTGWIGGTDAFDLMVHIPGIMDR
MUL_4667|M.ulcerans_Agy99 ALPGMIVGEIALLRNVPRTATVTTVEPLTGWIGGTDAFDLMVHIPGIMDR
Mb1025|M.bovis_AF2122/97 ALPGMIVGEIALLRDSPRSATVTTIEPLTGWTGGRGAFATMVHIPGVGER
Rv0998|M.tuberculosis_H37Rv ALPGMIVGEIALLRDSPRSATVTTIEPLTGWTGGRGAFATMVHIPGVGER
MAV_1121|M.avium_104 TSPGMIVGEIALLRDIPRTATVTTAQPLTGWTGDTEAFASMVHIPGVMPR
MLBr_00187|M.leprae_Br4923 ASHGMIIGEIALLRDGRRTATVITTEPLTGWVGDIDAFAQMVQIPSITRR
TH_0935|M.thermoresistible__bu VGPGVIVGEISLLRNAPRTATVVAAEPLSGWIGDREAFSVMLGIPGFADT
MAB_1554|M.abscessus_ATCC_1997 LVPGTVVGEIALLRGTARTATVVATQQVQGWSGGRDAFATMLEIPGVSES
* ::***:***. *:*** : : : ** *. ** :: :*..
Mflv_1915|M.gilvum_PYR-GCK LVRTARQRLAAYITPIPVQVRDGTVLYLRPVLPGDIERTTSGQVEFSSET
Mvan_4818|M.vanbaalenii_PYR-1 LVRTARQRVAAFVTPVPVEMRDGTVLYLRPVLPGDVERTVGGPVEFSSET
MSMEG_5458|M.smegmatis_MC2_155 LVRIARQRLAAFITPIPVQVRTGEWFYLRPVLPGDVERTLNGPVEFSSET
MMAR_4496|M.marinum_M LVRTVRQRLAAFITPIPVPLRDGTQLMLRPVLPGDSERTVHGHVHFSSET
MUL_4667|M.ulcerans_Agy99 LVRTVRQRLAAFITPIPVPLRDGTQLMLRPVLPGDSERTVHGHVHFSSET
Mb1025|M.bovis_AF2122/97 LLRTARQRLAAFVSPIPVRLADGTQLMLRPVLPGDRERTVHGHIQFSGET
Rv0998|M.tuberculosis_H37Rv LLRTARQRLAAFVSPIPVRLADGTQLMLRPVLPGDRERTVHGHIQFSGET
MAV_1121|M.avium_104 LLRTVRQRLAAFITPIPIQVRDGTHLLLRPVLPGDSERTVHGHIHFSSDT
MLBr_00187|M.leprae_Br4923 LLLTVRQRLAAFITPIPVQLRDGTHLMLRPVLPGDTERSLRGHVRFSRET
TH_0935|M.thermoresistible__bu LVKIARQRLASFITPIPVRMRDRTRLFLRPVLPGDEAKTREGHVEFSNET
MAB_1554|M.abscessus_ATCC_1997 LVWTARQRLATFVTPIPVRLRDGAEFYLRPILPGDSQRLAR----LSPRT
*: .***:*::::*:*: : : ***:**** : :* *
Mflv_1915|M.gilvum_PYR-GCK LYRRFQSVRSPTRSLMAYLFEVDYLDHFVFVLTEGVDGPVVADVRFVRDE
Mvan_4818|M.vanbaalenii_PYR-1 LYRRFQSVRSPSKSLLAYLFEVDYLDHFVFVLTEGPDGPVVADVRFVREE
MSMEG_5458|M.smegmatis_MC2_155 LYRRFQSVRKPTRALLEYLFEVDYADHFVWVMTEGALGPVIADARFVREG
MMAR_4496|M.marinum_M IYRRFMSARVPDLAMMHYLSEVDYVDHFVWVMVDG--SDPVADARFIRDS
MUL_4667|M.ulcerans_Agy99 IYRRFMSARVPDLAMMRYLSEVDYVDHFVWVMVDG--SDPVADARFIRDS
Mb1025|M.bovis_AF2122/97 LYRRFMSARVPSPALMHYLSEVDYVDHFVWVVTDG--SDPVADARFVRDE
Rv0998|M.tuberculosis_H37Rv LYRRFMSARVPSPALMHYLSEVDYVDHFVWVVTDG--SDPVADARFVRDE
MAV_1121|M.avium_104 LYRRFMSPRLPTPALMHYLSEVDYVDHFVWVVTDG--ADPVADARFVRDE
MLBr_00187|M.leprae_Br4923 LYLRFMSARAPSDELMHYLSEVDYVDHFVWVVTDG--GDPVADARFVRDE
TH_0935|M.thermoresistible__bu LYRRFMSMGQPNSALMHYLFAVDYVDHFVWVLTDTPDGVVVADGRFVRDH
MAB_1554|M.abscessus_ATCC_1997 VYRRFMG--VPGKRMITYLFEVDYLEHFAWALTDEPDGLVVADARFIRHT
:* ** . * :: ** *** :**.:.:.: . :** **:*.
Mflv_1915|M.gilvum_PYR-GCK KNPAEAEIAFIVGDAYQHRGVGTLLMAAISVAAASDGVQRFTARVLTDNY
Mvan_4818|M.vanbaalenii_PYR-1 HRSEQAEIAFIVADAYQGRGIGTFLMGAISVAAGYDGVQRFTARVLSENY
MSMEG_5458|M.smegmatis_MC2_155 HNATMAEVAFTVGDDYQGRGIGSFLMGALIVSANYVGVQRFNARVLTDNM
MMAR_4496|M.marinum_M VDPTVAEIAFTVADAYQGKGIGSFLIGALAVAARVDGVARFSARMLADNL
MUL_4667|M.ulcerans_Agy99 VDPAVAEIAFTVADAYQGKGIGSFLVGALAVAALVDGVARFSARMLADNL
Mb1025|M.bovis_AF2122/97 TDPTVAEIAFTVADAYQGRGIGSFLIGALSVAARVDGVERFAARMLSDNV
Rv0998|M.tuberculosis_H37Rv TDPTVAEIAFTVADAYQGRGIGSFLIGALSVAARVDGVERFAARMLSDNV
MAV_1121|M.avium_104 NDPTVAEIAFTVADAYQGRGIGTFLISALSIAAEVDGIERFSARMLSDNV
MLBr_00187|M.leprae_Br4923 SDPTLAEIAFTVADAYQGRGVGNFLISALSIAAHVNGVNRFSARMLTDNG
TH_0935|M.thermoresistible__bu ADPGTAEVAFLVADDYQGRGVGSFLMDALAVAATCAGVQRFTAQVLVDNY
MAB_1554|M.abscessus_ATCC_1997 DEPDCAELAFTVGDDYQGRGIGTLLMEALSVSAHAGGVRRFTASVLAENH
. **:** *.* ** :*:*.:*: *: ::* *: ** * :* :*
Mflv_1915|M.gilvum_PYR-GCK AMRAILDRFGARWRRDDLGVVVTEIAVPPVKDLPLSRELADQIRAVTRQA
Mvan_4818|M.vanbaalenii_PYR-1 AMRSILDRFGAVWHRDDLGVVTTEIPVPEVGELGLSHELVTQIRGLARQV
MSMEG_5458|M.smegmatis_MC2_155 AMRKIMDRLGAVWVREDLGVVMTEVDVPPVDTVPFEPELIDQIRDATRKV
MMAR_4496|M.marinum_M PMRTIMDRHGAVWQREDVGVITTVIDVPGPRDLGFGREMAGQIRRVARQV
MUL_4667|M.ulcerans_Agy99 PMRTIMDRHGAVWQREDVGVITTVIDVPGPRDLGFGREMAGQIRRVARQV
Mb1025|M.bovis_AF2122/97 PMRTIMDRYGAVWQREDVGVITTMIDVPGPGELSLGREMVDQINRVARQV
Rv0998|M.tuberculosis_H37Rv PMRTIMDRYGAVWQREDVGVITTMIDVPGPGELSLGREMVDQINRVARQV
MAV_1121|M.avium_104 PMRAIMDRYGAVWQREDIGVITTVIDVPHRRDLPFRKHEADEIRRVARQV
MLBr_00187|M.leprae_Br4923 PMRAIMDHHGAVWRRYDVGVITTVIDVPRQRDLIIGRAMADQIAGVVRQV
TH_0935|M.thermoresistible__bu PMRRILDRFGVHWEFADNNVVSTVFDVPKLRDLSLSPRLYRRIYDMARQV
MAB_1554|M.abscessus_ATCC_1997 AMRSILNRYGARWESDGPGVVTTILDVPRTRDLNLSPRVSIQIDVATRQM
.** *::: *. * . .*: * . ** : : .* .*:
Mflv_1915|M.gilvum_PYR-GCK VRAVG-
Mvan_4818|M.vanbaalenii_PYR-1 IRAAG-
MSMEG_5458|M.smegmatis_MC2_155 IRAVSQ
MMAR_4496|M.marinum_M IEAVS-
MUL_4667|M.ulcerans_Agy99 IEAVS-
Mb1025|M.bovis_AF2122/97 IEAVG-
Rv0998|M.tuberculosis_H37Rv IEAVG-
MAV_1121|M.avium_104 IETVG-
MLBr_00187|M.leprae_Br4923 IGAVG-
TH_0935|M.thermoresistible__bu VRAVG-
MAB_1554|M.abscessus_ATCC_1997 VQALC-
: :