For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SRKRGRCAVYAPRPWSVREFPDVTVLSSASVSAAHGEQVARAVGQILVHREIVGGARVRLKTGACGRGPM VVQVNLRVGELPARVLAVTPGIDDLTPALLRLDRHIVRMYDQWRPRPWPDLTRRRLFVRPDAAIARRKPV SLQCSTPLAAVAVMDAMDYDAHVFTDAETGEDAVVYRAGPSGLRLARQRHVYPPGWAWSPSNSAPPVPLI VNSRPTLALTEEEALRRAREHGLQLLFFTDSATGRGQLLYPRYDGDLGLVGPARRA*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_3705 | - | - | 100% (267) | hypothetical protein MMAR_3705 |
| M. marinum M | MMAR_0944 | - | 6e-22 | 34.09% (264) | hypothetical protein MMAR_0944 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0082 | - | 5e-94 | 64.23% (260) | hypothetical protein Mb0082 |
| M. gilvum PYR-GCK | Mflv_5000 | - | 1e-22 | 33.91% (230) | hypothetical protein Mflv_5000 |
| M. tuberculosis H37Rv | Rv0079 | - | 5e-94 | 64.23% (260) | hypothetical protein Rv0079 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | MSMEG_3935 | - | 1e-19 | 30.19% (265) | hypothetical protein MSMEG_3935 |
| M. thermoresistible (build 8) | TH_2546 | - | 4e-59 | 48.78% (246) | PUTATIVE dimethylaniline monooxygenase [N-oxide-forming] 5 |
| M. ulcerans Agy99 | MUL_3647 | - | 1e-141 | 98.79% (248) | hypothetical protein MUL_3647 |
| M. vanbaalenii PYR-1 | Mvan_1377 | - | 4e-20 | 34.33% (233) | hypothetical protein Mvan_1377 |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_3705|M.marinum_M MSRKRGRCAV---YAPRPWSVREFPDVTVLSSASVSAAHGEQV---ARAV
MUL_3647|M.ulcerans_Agy99 MSRKRGRCAV---YAPRPWSVRGFPDVTVLSSASVSAAHGEQV---ARAV
Mb0082|M.bovis_AF2122/97 MEPKRSRLVV---CAPEPSHAREFPDVAVFSGGRANASQAERL---ARAV
Rv0079|M.tuberculosis_H37Rv MEPKRSRLVV---CAPEPSHAREFPDVAVFSGGRANASQAERL---ARAV
TH_2546|M.thermoresistible__bu VSKEKLRAMTSLSVSAEPGTDPAYPEVRVFSDLDPEADTADMVRTVERLV
Mflv_5000|M.gilvum_PYR-GCK MSNGAEAPPT---VDVDVTTHGDFPGIAEYAQSKIGG------------L
Mvan_1377|M.vanbaalenii_PYR-1 MSNGAEASPV---VDVEVTTHGDFPGIAEYARTKIGG------------L
MSMEG_3935|M.smegmatis_MC2_155 -------------MDVDVSTDGELPGAAEYAREKIGR------------L
* : :
MMAR_3705|M.marinum_M GQILVHREIVGGARVRLKTGACGRGPMVVQVNLRVGELPARVLAVTP---
MUL_3647|M.ulcerans_Agy99 GQILVHREIVGGARVRLKTGACGRGPMEVQVNLRVGELPARVLAVTP---
Mb0082|M.bovis_AF2122/97 GRVLADRGVTGGARVRLTMANCADGPTLVQINLQVGDTPLRAQAATA---
Rv0079|M.tuberculosis_H37Rv GRVLADRGVTGGARVRLTMANCADGPTLVQINLQVGDTPLRAQAATA---
TH_2546|M.thermoresistible__bu REALRHRGIGGGARVRLSTPTAPDDPILIQINLLVRDKPVRMQTLND---
Mflv_5000|M.gilvum_PYR-GCK TRLARRPVSYARVRLTRRHDPAVERPVIAQANLDVGGRPVRAQVEAATAQ
Mvan_1377|M.vanbaalenii_PYR-1 ARIVHRPILRARVRLTRSHDPAVERPVVAQGNLDVQGRPVRAQVEADTAQ
MSMEG_3935|M.smegmatis_MC2_155 SRRAHRPVLHARVRLTRHGDPAVERPVIAQANLDVNGRQVRAQVEGVNAR
. . .*: . * * ** * * .
MMAR_3705|M.marinum_M -GIDDLTPALLRLDRHIVRMYDQWRP-------RPWPD------LTRRRL
MUL_3647|M.ulcerans_Agy99 -GIDDLTPALLRLDRHIVRMYDQWRP-------RPWPD------LTRRRL
Mb0082|M.bovis_AF2122/97 -GIDDLRPALIRLDRQIVRASAQWCP-------RPWPD------RPRRRL
Rv0079|M.tuberculosis_H37Rv -GIDDLRPALIRLDRQIVRASAQWCP-------RPWPD------RPRRRL
TH_2546|M.thermoresistible__bu -SPHRWDAVLRRLDRQIVRAWGPWRP-------RPWPD------STRTLL
Mflv_5000|M.gilvum_PYR-GCK EAIDTLESRLRRRLEHLHDRWDTPRG---PGAAPPWRHDDKAEREIRSFG
Mvan_1377|M.vanbaalenii_PYR-1 EAIDKLESRLRRRLEHLAERWEAPRG---PEAAPPWRNGEEPARAPRSVT
MSMEG_3935|M.smegmatis_MC2_155 EAVDRLEARLRSRLERIAEHWEARRGGVPAEAGREWRHESEPARRPGYFP
. . . * .:: * .
MMAR_3705|M.marinum_M FVRPDAAIARRKPVSLQCSTPLAAVAVMDAMDYDAHVFTDAETGEDAVVY
MUL_3647|M.ulcerans_Agy99 FVRPDAAIARRKPVSLQCSTPLAAVAVMDAMDYDAHVFTDAETGEDAVVY
Mb0082|M.bovis_AF2122/97 TTPAEALVTRRKPVVLRRATPLQAIAAMDAMDYDVHLFTDAETGEDAVVY
Rv0079|M.tuberculosis_H37Rv TTPAEALVTRRKPVVLRRATPLQAIAAMDAMDYDVHLFTDAETGEDAVVY
TH_2546|M.thermoresistible__bu TAPGHATIVRRKEVAAARTTPWCASEILDAMDYNMHLFTDVETGEEAVVY
Mflv_5000|M.gilvum_PYR-GCK GTPREPRIIRRKSYSMAPCTVDDAVAEMELLDYDFHLFAEKGSGTAAVVY
Mvan_1377|M.vanbaalenii_PYR-1 RSTGEPRIIRRKSFAMAPCTIDDAVAEMELLDYDFHLFTESGSETAGVVY
MSMEG_3935|M.smegmatis_MC2_155 RPPEERRIIRRKSFSMVPCTVDEAALEMEMLDYDFHLFTEKGTGFAAVLY
. : *** * * :: :**: *:*:: : .*:*
MMAR_3705|M.marinum_M RAGPSGLRLARQRHVYPPGWAWSPSNSAPPVPLIVNSRPTLALTEEEALR
MUL_3647|M.ulcerans_Agy99 RAGPSGLRLARQRHVYPPGWAWSPSNSAPPVLLIVNSRPTLALTEEEALR
Mb0082|M.bovis_AF2122/97 RAGPSGLRLARQHHVFPPGWSRCRAPAGPPVPLIVNSRPTPVLTEAAAVD
Rv0079|M.tuberculosis_H37Rv RAGPSGLRLARQHHVFPPGWSRCRAPAGPPVPLIVNSRPTPVLTEAAAVD
TH_2546|M.thermoresistible__bu RAGPTGLRLVRQRHVHPP-------REPGPDALVVNSRPAPTLTEDTALA
Mflv_5000|M.gilvum_PYR-GCK RSEPTGYRIALVAPSLAG------EVAPFQGLVTISPHAVPCLREQDALE
Mvan_1377|M.vanbaalenii_PYR-1 RGGPTGYRVALVAPAVAD------EVAPYQDSVTISPQPAPCLREQDALE
MSMEG_3935|M.smegmatis_MC2_155 KGGPTGYRLVLVIPVPAD------ELSPFEKPITISTHPAPCLTQRDAVE
:. *:* *:. . : :..:.. * : *:
MMAR_3705|M.marinum_M RAREHGLQLLFFTDSATGRGQLLYPRYDGDLGLVGPAR--RA------
MUL_3647|M.ulcerans_Agy99 RAREHGLQLLFFTDSATGRGQ---------------------------
Mb0082|M.bovis_AF2122/97 RAREHGLPFLFFTDQATGRGQLLYSRYDGNLGLITPTG--DGVADGLA
Rv0079|M.tuberculosis_H37Rv RAREHGLPFLFFTDQATGRGQLLYSRYDGNLGLITPTG--DGVADGLA
TH_2546|M.thermoresistible__bu RLCDHRLHFVFFTDADSGRGKLLYPRYDGGIGLITPTGGVDAVTG---
Mflv_5000|M.gilvum_PYR-GCK RLRRLGLPFLFYVDAAQGRASVLYRRFDGDYGVLTPAPITSER-----
Mvan_1377|M.vanbaalenii_PYR-1 RMALLGLPFLFFIDAAQGRASLLYRRYDGAYGLITPAG----------
MSMEG_3935|M.smegmatis_MC2_155 RLGLLGLPFLFYIDAAEGRASVIYRRYDGHYGLITPADG---------
* * ::*: * **..