For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MAGHPGQMVGRYLVNALDLQQCRAALDHEAFSGEFSLRRLDPEGDLDLMHSWMNDPEVARFWRKPWPRPQ IASYLFDQHCSAHSVPYLGLLDGAPISYWELYRADLDPLARHYAAREHDAGLHSLLGPAECRGRRLAADL LRIVSTWQLDADPSADRVIAEPDVNNTRMIRALERAGFERTADLDLPDKRAALMIRDRQRR
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_3692 | - | - | 100% (201) | hypothetical protein MMAR_3692 |
M. marinum M | MMAR_1587 | - | 6e-20 | 32.93% (164) | hypothetical protein MMAR_1587 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1382c | - | 1e-14 | 29.53% (149) | hypothetical protein Mb1382c |
M. gilvum PYR-GCK | Mflv_4412 | - | 3e-18 | 28.49% (186) | hypothetical protein Mflv_4412 |
M. tuberculosis H37Rv | Rv1347c | - | 1e-14 | 29.53% (149) | hypothetical protein Rv1347c |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_3125c | - | 2e-23 | 34.30% (172) | hypothetical protein MAB_3125c |
M. avium 104 | MAV_3978 | - | 2e-18 | 30.49% (164) | hypothetical protein MAV_3978 |
M. smegmatis MC2 155 | MSMEG_2128 | - | 2e-20 | 32.32% (164) | malonyl CoA decarboxylase |
M. thermoresistible (build 8) | TH_2418 | - | 6e-24 | 31.75% (189) | CONSERVED HYPOTHETICAL PROTEIN |
M. ulcerans Agy99 | MUL_3635 | - | 1e-118 | 100.00% (201) | hypothetical protein MUL_3635 |
M. vanbaalenii PYR-1 | Mvan_1943 | - | 2e-16 | 28.66% (164) | hypothetical protein Mvan_1943 |
CLUSTAL 2.0.9 multiple sequence alignment MSMEG_2128|M.smegmatis_MC2_155 ---------------MTDINTDTDEALEPVLKRELTDISDAVRAVPAPPV TH_2418|M.thermoresistible__bu -------------------MTETSEAPEKILKRELTTVSDAVRAVPAPPT Mb1382c|M.bovis_AF2122/97 --------------MTKPTSAGQADDALVRLARERFDLPDQVRRLARPPV Rv1347c|M.tuberculosis_H37Rv --------------MTKPTSAGQADDALVRLARERFDLPDQVRRLARPPV Mflv_4412|M.gilvum_PYR-GCK MSCCSPTARKPSLTYIRVGSALTMTDALPLLPRELTDLSDAVRAVPAPPI Mvan_1943|M.vanbaalenii_PYR-1 -----------------------MTDVLPILPRELIELSAEVRAVPPPPI MAV_3978|M.avium_104 -----------------------MSGVEPILPRELTDLPEAIRGVPAPPV MAB_3125c|M.abscessus_ATCC_199 ----------------------MNSPTGYRIARENTDVVAEVMAAGPPPM MMAR_3692|M.marinum_M ----------------------MAGHPGQMVGRYLVNALDLQQCRAALDH MUL_3635|M.ulcerans_Agy99 ----------------------MAGHPGQMVGRYLVNALDLQQCRAALDH : * MSMEG_2128|M.smegmatis_MC2_155 PVLAEP-YSIRLADAE-ADCELVSEWMNRPHLVEAWEYPWPPQRWRRYLQ TH_2418|M.thermoresistible__bu PVLAEP-YAFRLVDPD-RDAELVSAWMNMPHLVEAWEYAWPPDRWRRYLQ Mb1382c|M.bovis_AF2122/97 PSLEPP-YGLRVAQL--TDAEMLAEWMNRPHLAAAWEYDWPASRWRQHLN Rv1347c|M.tuberculosis_H37Rv PSLEPP-YGLRVAQL--TDAEMLAEWMNRPHLAAAWEYDWPASRWRQHLN Mflv_4412|M.gilvum_PYR-GCK PQLAAP-YAMRLVDPD-TDAAMISEWMNRPHLAEAWEYDRPVEWWDGYLR Mvan_1943|M.vanbaalenii_PYR-1 PHLDDP-YQIRLVDPD-PDAAMISEWMNRPHLAEAWEYDRPVEWWHGYLR MAV_3978|M.avium_104 PALPQP-YGLRVVDPD-ADAETVCEWMSRPHLVQAWESNWPLARWRRYLR MAB_3125c|M.abscessus_ATCC_199 PSFDGTRYALRRVDPLGTDPEMLSEWFARPHLVETWEQPWSAARWHEDSS MMAR_3692|M.marinum_M EAFSGE-FSLRRLDPE-GDLDLMHSWMNDPEVARFWRKPWPRPQIASYLF MUL_3635|M.ulcerans_Agy99 EAFSGE-FSLRRLDPE-GDLDLMHSWMNDPEVARFWRKPWPRPQIASYLF : : :* : * : *: *.:. *. . MSMEG_2128|M.smegmatis_MC2_155 AQLDGEYSRPLITDFRGKPAGYVELYRAAKDSIAPRYAADPYDIGMHAAI TH_2418|M.thermoresistible__bu AQLDGEYSRPFIGSFRGREVGYVELYRAAKDSIATRYDADPYDIGLHAAI Mb1382c|M.bovis_AF2122/97 AQLEGTYSLPLIGSWHGTDGGYLELYWAAKDLISHYYDADPYDLGLHAAI Rv1347c|M.tuberculosis_H37Rv AQLEGTYSLPLIGSWHGTDGGYLELYWAAKDLISHYYDADPYDLGLHAAI Mflv_4412|M.gilvum_PYR-GCK AQLAGEYSRPLIGTFNGEPQGYVEVYRAAKDSIAPRYDADPYDLGLHAAI Mvan_1943|M.vanbaalenii_PYR-1 AQLAGTYSRPLIGSFKGEALGYVEVYRAAKDSIAPRYDADPHDLGLHAAI MAV_3978|M.avium_104 AQLDGEFSRPLIATLDGVDRAYLELYRAAKDSIATRYEHHPHDLGLHVAV MAB_3125c|M.abscessus_ATCC_199 YRLAGDYSLPCILSVDGTEIGYIELYRAARDEIARIYPAHAHDVGLHVAT MMAR_3692|M.marinum_M DQHCSAHSVPYLGLLDGAPISYWELYRADLDPLARHYAAREHDAGLHSLL MUL_3635|M.ulcerans_Agy99 DQHCSAHSVPYLGLLDGAPISYWELYRADLDPLARHYAAREHDAGLHSLL : . .* * : * .* *:* * * :: * :* *:* MSMEG_2128|M.smegmatis_MC2_155 ADLRFVNRGIAPILLPRIVASVFELEPDCRRIMFDPDHRNTGARRLCEWA TH_2418|M.thermoresistible__bu ADVRMVNRGIAPILLPRVVASVFDLDPRCRRIMFDPDHRNSAARRLCEFA Mb1382c|M.bovis_AF2122/97 ADLSKVNRGFGPLLLPRIVASVFANEPRCRRIMFDPDHRNTATRRLCEWA Rv1347c|M.tuberculosis_H37Rv ADLSKVNRGFGPLLLPRIVASVFANEPRCRRIMFDPDHRNTATRRLCEWA Mflv_4412|M.gilvum_PYR-GCK ADLGLVNRGFGPLLLPRLAANLFEIEPRCRRILFDPDHRNTGARRLCEYA Mvan_1943|M.vanbaalenii_PYR-1 ADLGIVNRGFGPILLPRLAASLFEIEPRCRRIMFDPDHRNAGARRLCEYA MAV_3978|M.avium_104 ADLDHIERGHVSYLLPHLVVSLFSLDPRCRRIMFDPDHRNVLARKFCERS MAB_3125c|M.abscessus_ATCC_199 ADTRYLGRGVVSEWMRLLPSATYHADPDCRRMMIEPAASNTPMRKALDRI MMAR_3692|M.marinum_M GPAECRGRRLAADLLRIVSTWQLDADPSADRVIAEPDVNNTRMIRALERA MUL_3635|M.ulcerans_Agy99 GPAECRGRRLAADLLRIVSTWQLDADPSADRVIAEPDVNNTRMIRALERA . * . : : :* . *:: :* * : : MSMEG_2128|M.smegmatis_MC2_155 GCAFLGEHQMS-NRRMALYVLPRTPDDIPESAA- TH_2418|M.thermoresistible__bu GCEFLGEHDMP-NRRMALYALHR-----PEST-- Mb1382c|M.bovis_AF2122/97 GCKFLGEHDTT-NRRMALYALEA-----PTTAA- Rv1347c|M.tuberculosis_H37Rv GCKFLGEHDTT-NRRMALYALEA-----PTTAA- Mflv_4412|M.gilvum_PYR-GCK GCEFLGEHEMS-NRRMALYALHR-----PA---- Mvan_1943|M.vanbaalenii_PYR-1 RCDFLGEHQMS-NRRMALYALNR-----PA---- MAV_3978|M.avium_104 GCTFLGEHDMA-NRRMALYVLPRTPDDVPRRRDA MAB_3125c|M.abscessus_ATCC_199 GWTFLGEFDIRPDRRIALYRTDRA---------- MMAR_3692|M.marinum_M GFERTADLDLP-DKRAALMIRDRQRR-------- MUL_3635|M.ulcerans_Agy99 GFERTADLDLP-DKRAALMIRDRQRR-------- .: : ::* **