For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MSEADTLFPRELTDLDDEVRSVPPPPAPEVPSPYAFRLADPDADAEKIADWMRRPHLLRAWDAAWPASRW YRYLQAQLEGDYSRPYIGSLDGLDYGYLELYRAAKDLISTLYESDPYDLGIHAATAEPKFVGLGNAQLLL PHFVASVLNAEPQCRRIIFSPDYRSRGTRRFCENGGCTFLGEHDLPDRRVALYVLPRTLDDVPGLRS
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_1587 | - | - | 100% (207) | hypothetical protein MMAR_1587 |
| M. marinum M | MMAR_3692 | - | 6e-20 | 32.93% (164) | hypothetical protein MMAR_3692 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb1382c | - | 1e-58 | 58.60% (186) | hypothetical protein Mb1382c |
| M. gilvum PYR-GCK | Mflv_4412 | - | 4e-63 | 55.33% (197) | hypothetical protein Mflv_4412 |
| M. tuberculosis H37Rv | Rv1347c | - | 1e-58 | 58.60% (186) | hypothetical protein Rv1347c |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3125c | - | 1e-38 | 41.18% (187) | hypothetical protein MAB_3125c |
| M. avium 104 | MAV_3978 | - | 7e-73 | 57.28% (206) | hypothetical protein MAV_3978 |
| M. smegmatis MC2 155 | MSMEG_2128 | - | 1e-68 | 57.79% (199) | malonyl CoA decarboxylase |
| M. thermoresistible (build 8) | TH_2418 | - | 1e-68 | 58.88% (197) | CONSERVED HYPOTHETICAL PROTEIN |
| M. ulcerans Agy99 | MUL_3447 | - | 1e-122 | 99.03% (207) | hypothetical protein MUL_3447 |
| M. vanbaalenii PYR-1 | Mvan_1943 | - | 2e-59 | 52.79% (197) | hypothetical protein Mvan_1943 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb1382c|M.bovis_AF2122/97 --------------MTKPTSAGQADDALVRLARERFDLPDQVRRLARPPV
Rv1347c|M.tuberculosis_H37Rv --------------MTKPTSAGQADDALVRLARERFDLPDQVRRLARPPV
Mflv_4412|M.gilvum_PYR-GCK MSCCSPTARKPSLTYIRVGSALTMTDALPLLPRELTDLSDAVRAVPAPPI
Mvan_1943|M.vanbaalenii_PYR-1 -----------------------MTDVLPILPRELIELSAEVRAVPPPPI
MSMEG_2128|M.smegmatis_MC2_155 ---------------MTDINTDTDEALEPVLKRELTDISDAVRAVPAPPV
TH_2418|M.thermoresistible__bu -------------------MTETSEAPEKILKRELTTVSDAVRAVPAPPT
MMAR_1587|M.marinum_M -----------------------MSEADTLFPRELTDLDDEVRSVPPPPA
MUL_3447|M.ulcerans_Agy99 -----------------------MSEADTLFPRELTDLDDEVRSVPPPPA
MAV_3978|M.avium_104 -----------------------MSGVEPILPRELTDLPEAIRGVPAPPV
MAB_3125c|M.abscessus_ATCC_199 ----------------------MNSPTGYRIARENTDVVAEVMAAGPPPM
: ** : : **
Mb1382c|M.bovis_AF2122/97 PSLEPP-YGLRVAQLT--DAEMLAEWMNRPHLAAAWEYDWPASRWRQHLN
Rv1347c|M.tuberculosis_H37Rv PSLEPP-YGLRVAQLT--DAEMLAEWMNRPHLAAAWEYDWPASRWRQHLN
Mflv_4412|M.gilvum_PYR-GCK PQLAAP-YAMRLVDPDT-DAAMISEWMNRPHLAEAWEYDRPVEWWDGYLR
Mvan_1943|M.vanbaalenii_PYR-1 PHLDDP-YQIRLVDPDP-DAAMISEWMNRPHLAEAWEYDRPVEWWHGYLR
MSMEG_2128|M.smegmatis_MC2_155 PVLAEP-YSIRLADAEA-DCELVSEWMNRPHLVEAWEYPWPPQRWRRYLQ
TH_2418|M.thermoresistible__bu PVLAEP-YAFRLVDPDR-DAELVSAWMNMPHLVEAWEYAWPPDRWRRYLQ
MMAR_1587|M.marinum_M PEVPSP-YAFRLADPDA-DAEKIADWMRRPHLLRAWDAAWPASRWYRYLQ
MUL_3447|M.ulcerans_Agy99 PEVPSP-YAFRLADPDA-DAEKIADWMRRPHLLRAWDAAWPASRWYRYLQ
MAV_3978|M.avium_104 PALPQP-YGLRVVDPDA-DAETVCEWMSRPHLVQAWESNWPLARWRRYLR
MAB_3125c|M.abscessus_ATCC_199 PSFDGTRYALRRVDPLGTDPEMLSEWFARPHLVETWEQPWSAARWHEDSS
* . . * :* .: * :. *: *** :*: . *
Mb1382c|M.bovis_AF2122/97 AQLEGTYSLPLIGSWHGTDGGYLELYWAAKDLISHYYDADPYDLGLHAAI
Rv1347c|M.tuberculosis_H37Rv AQLEGTYSLPLIGSWHGTDGGYLELYWAAKDLISHYYDADPYDLGLHAAI
Mflv_4412|M.gilvum_PYR-GCK AQLAGEYSRPLIGTFNGEPQGYVEVYRAAKDSIAPRYDADPYDLGLHAAI
Mvan_1943|M.vanbaalenii_PYR-1 AQLAGTYSRPLIGSFKGEALGYVEVYRAAKDSIAPRYDADPHDLGLHAAI
MSMEG_2128|M.smegmatis_MC2_155 AQLDGEYSRPLITDFRGKPAGYVELYRAAKDSIAPRYAADPYDIGMHAAI
TH_2418|M.thermoresistible__bu AQLDGEYSRPFIGSFRGREVGYVELYRAAKDSIATRYDADPYDIGLHAAI
MMAR_1587|M.marinum_M AQLEGDYSRPYIGSLDGLDYGYLELYRAAKDLISTLYESDPYDLGIHAAT
MUL_3447|M.ulcerans_Agy99 AQLEGDYSRPYIGSLDGLDYGYLELYRAAKDLISTLYESDPYDLGIHAAT
MAV_3978|M.avium_104 AQLDGEFSRPLIATLDGVDRAYLELYRAAKDSIATRYEHHPHDLGLHVAV
MAB_3125c|M.abscessus_ATCC_199 YRLAGDYSLPCILSVDGTEIGYIELYRAARDEIARIYPAHAHDVGLHVAT
:* * :* * * * .*:*:* **:* *: * ..:*:*:*.*
Mb1382c|M.bovis_AF2122/97 ADLSKVNRGFGPLLLPRIVASVFANEPRCRRIMFDPDHRNTATRRLCEWA
Rv1347c|M.tuberculosis_H37Rv ADLSKVNRGFGPLLLPRIVASVFANEPRCRRIMFDPDHRNTATRRLCEWA
Mflv_4412|M.gilvum_PYR-GCK ADLGLVNRGFGPLLLPRLAANLFEIEPRCRRILFDPDHRNTGARRLCEYA
Mvan_1943|M.vanbaalenii_PYR-1 ADLGIVNRGFGPILLPRLAASLFEIEPRCRRIMFDPDHRNAGARRLCEYA
MSMEG_2128|M.smegmatis_MC2_155 ADLRFVNRGIAPILLPRIVASVFELEPDCRRIMFDPDHRNTGARRLCEWA
TH_2418|M.thermoresistible__bu ADVRMVNRGIAPILLPRVVASVFDLDPRCRRIMFDPDHRNSAARRLCEFA
MMAR_1587|M.marinum_M AEPKFVGLGNAQLLLPHFVASVLNAEPQCRRIIFSPDYRSRGTRRFCENG
MUL_3447|M.ulcerans_Agy99 AEPKFVGLGNAQLLLPHFVASVLNAEPQCRRIVFSPDYRSRGTRRFCENG
MAV_3978|M.avium_104 ADLDHIERGHVSYLLPHLVVSLFSLDPRCRRIMFDPDHRNVLARKFCERS
MAB_3125c|M.abscessus_ATCC_199 ADTRYLGRGVVSEWMRLLPSATYHADPDCRRMMIEPAASNTPMRKALDRI
*: : * : . :* ***:::.* . *: :
Mb1382c|M.bovis_AF2122/97 GCKFLGEHDTT-NRRMALYALEA-----PTTAA-
Rv1347c|M.tuberculosis_H37Rv GCKFLGEHDTT-NRRMALYALEA-----PTTAA-
Mflv_4412|M.gilvum_PYR-GCK GCEFLGEHEMS-NRRMALYALHR-----PA----
Mvan_1943|M.vanbaalenii_PYR-1 RCDFLGEHQMS-NRRMALYALNR-----PA----
MSMEG_2128|M.smegmatis_MC2_155 GCAFLGEHQMS-NRRMALYVLPRTPDDIPESAA-
TH_2418|M.thermoresistible__bu GCEFLGEHDMP-NRRMALYALHR-----PEST--
MMAR_1587|M.marinum_M GCTFLGEHDLP-DRRVALYVLPRTLDDVPGLRS-
MUL_3447|M.ulcerans_Agy99 GCTFLGEHDLP-DRRVALYVLPRTLDDVPGLSS-
MAV_3978|M.avium_104 GCTFLGEHDMA-NRRMALYVLPRTPDDVPRRRDA
MAB_3125c|M.abscessus_ATCC_199 GWTFLGEFDIRPDRRIALYRTDRA----------
****.: :**:***