For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VRQDTTSTSPVRRAAIQVLAGAGLLLVVLEAFLIVSFRLRLRPAINAIRRFNRAVLNPAMLTMAGSAHWY ASVIHHQGRTTGRAYATPVVAERVGDQFYIPLPYGRTDWCANVMAAGECTVEHKGRRYRTTAPAVIGFAV AAPFISARSRRTFRLYKVRSFLRLDITDKA
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_3392 | - | - | 100% (170) | hypothetical protein MMAR_3392 |
| M. marinum M | MMAR_3396 | - | 4e-11 | 34.40% (125) | hypothetical protein MMAR_3396 |
| M. marinum M | MMAR_2394 | - | 1e-09 | 36.78% (87) | hypothetical protein MMAR_2394 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb0536c | - | 1e-09 | 35.40% (113) | hypothetical protein Mb0536c |
| M. gilvum PYR-GCK | Mflv_1991 | - | 6e-14 | 35.71% (112) | hypothetical protein Mflv_1991 |
| M. tuberculosis H37Rv | Rv0523c | - | 1e-09 | 35.40% (113) | hypothetical protein Rv0523c |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_3980 | - | 3e-11 | 35.58% (104) | hypothetical protein MAB_3980 |
| M. avium 104 | MAV_3188 | - | 1e-07 | 34.72% (72) | hypothetical protein MAV_3188 |
| M. smegmatis MC2 155 | MSMEG_5376 | - | 4e-12 | 32.14% (112) | hypothetical protein MSMEG_5376 |
| M. thermoresistible (build 8) | TH_2253 | - | 3e-11 | 36.45% (107) | CONSERVED HYPOTHETICAL PROTEIN |
| M. ulcerans Agy99 | MUL_1571 | - | 4e-09 | 35.63% (87) | hypothetical protein MUL_1571 |
| M. vanbaalenii PYR-1 | Mvan_1405 | - | 3e-27 | 46.77% (124) | hypothetical protein Mvan_1405 |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_3392|M.marinum_M -MRQDTTSTSPVRRAAIQVLAGAGLLLVVLEAFLIVSFRLRLRPAINAIR
Mvan_1405|M.vanbaalenii_PYR-1 MARQSTIS------------------------------------ARDAVR
Mb0536c|M.bovis_AF2122/97 ------------------------------------------MQLPQWLA
Rv0523c|M.tuberculosis_H37Rv ------------------------------------------MQLPQWLA
MAB_3980|M.abscessus_ATCC_1997 ------------------------------------------MQIPQSVA
TH_2253|M.thermoresistible__bu ------------------------------------------MQLPQGLA
Mflv_1991|M.gilvum_PYR-GCK --------------------------------------------MPRRVA
MSMEG_5376|M.smegmatis_MC2_155 ------------------------------------------MRAPRQVA
MAV_3188|M.avium_104 MSAKDHPNNAPG----------------------------VPMVFPVWFE
MUL_1571|M.ulcerans_Agy99 MSAKDHPNNAPG----------------------------VPMVFPPWFE
.
MMAR_3392|M.marinum_M RFNRAVLNPAMLTMAGSAHWYASVIHHQGRTTGRAYATPVVAERVG----
Mvan_1405|M.vanbaalenii_PYR-1 TFNKHVLNPVMLLLAGRRHWYAAALRHTGRRTGRIRTTPVVAERVS----
Mb0536c|M.bovis_AF2122/97 RFNRYVTNPIQRLWAGWLPAFA-ILEHVGRRSGKPYRTPLNVFSADVDGR
Rv0523c|M.tuberculosis_H37Rv RFNRYVTNPIQRLWAGWLPAFA-ILEHVGRRSGKPYRTPLNVFSADVDGR
MAB_3980|M.abscessus_ATCC_1997 RFNKYVTNPVQRLWAGWAPSFA-IIEHKGRKSGKEFRTPVTAFTT----P
TH_2253|M.thermoresistible__bu RFNRYVTNPIQRLWAGWAPLFG-ILEHVGRKSGRQYRTPLTVFPT----A
Mflv_1991|M.gilvum_PYR-GCK EFNRRVTNPATKSLTPWLPNLG-TLEHVGRKSARRYRTPLLVFET----A
MSMEG_5376|M.smegmatis_MC2_155 EFNKRFTNPAARAITPWLPYLG-TLEHVGRKSGKCYRTPLLVFET----H
MAV_3188|M.avium_104 NLQVKYLNSAIKPLARFLPGTA-TIKHRGRTSGKQYETIITPYRKG----
MUL_1571|M.ulcerans_Agy99 RFQIKYINPALKPIARCLPGTA-TITHQGRKSGKPYKTIVTVYRKG----
:: *. : . : * ** :.: * :
MMAR_3392|M.marinum_M DQFYIPLPYGR-TDWCANVMAAGECTVEHKG-RRYRTTAPAVIGFAVAAP
Mvan_1405|M.vanbaalenii_PYR-1 DGFITPLPYGTGVDWLRNVQATRTATITVDG-SSFDVVDPQIIDAATAAG
Mb0536c|M.bovis_AF2122/97 AGVAILLTYGPNRDWLKNITAAGGGRMRRYG-KTFGVANPRRLTKAEAAP
Rv0523c|M.tuberculosis_H37Rv AGVAILLTYGPNRDWLKNITAAGGGRMRRYG-KTFGVANPRRLTKAEAAP
MAB_3980|M.abscessus_ATCC_1997 DGVAILLTYGPDRDWLKNLQAAGGGRVVRRG-KTHDVVNPRVVSRDEAAT
TH_2253|M.thermoresistible__bu DGVAILLTYGPDRDWLKNVMAAEQVRMRRHG-KTLTLTDPQVMSRDEAAK
Mflv_1991|M.gilvum_PYR-GCK DGYAILIGYGPQTDWVKNVLAGGPTVLHKRG-RAVVLTDPRVVSKAEAAP
MSMEG_5376|M.smegmatis_MC2_155 DGYAILVGYGPQTDWLKNVLAGGQTVLHKRG-RAIALGNPRVVSKAEAAA
MAV_3188|M.avium_104 NTLAIALGHGK-TNWVKNVLAAGEADVVFGRDRSVHLINPRILPAGSDGA
MUL_1571|M.ulcerans_Agy99 NVLAIAPGHGK-TDWVKNVLAAGEADVFFAR-RQVHIVNPRILPAGSQSD
:* :* *: * : * : .
MMAR_3392|M.marinum_M FISARSRRTFRLYKVRSFLRLDITDKA-------
Mvan_1405|M.vanbaalenii_PYR-1 QLSARRRRAFGRFGIQHFVKFDLATDTSGENHAH
Mb0536c|M.bovis_AF2122/97 YVSSRWRPVFARLPFDEAVLLTKAD---------
Rv0523c|M.tuberculosis_H37Rv YVSSRWRPVFARLPFDEAVLLTKAD---------
MAB_3980|M.abscessus_ATCC_1997 LVKSR---AFGRLPFEQAVLLTYA----------
TH_2253|M.thermoresistible__bu SVVGPARRVFARLPFEQAVLLRRVS---------
Mflv_1991|M.gilvum_PYR-GCK LVVARARPFYRLFPYDEGALLLTDAGPAR-----
MSMEG_5376|M.smegmatis_MC2_155 LVAPRSRWLYRVFPYDEATLLLTHGGSAG-----
MAV_3188|M.avium_104 GLPFMARVQLRWMGVFVADIA-------------
MUL_1571|M.ulcerans_Agy99 ELPMMARVQLRRIGVFVADIA-------------
: