For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VSIGIHDLSIATAHYVLDHATLAEHHGVDVNKYLIGLGQQQMSIVAPDEDIVTLAAAAADPIIKRHGSQK IRTIVIGTETGVDQSKSAGIWVSSLLGLPSSARVLEVKQACYGATGALQLALALVHRDPTQQVLVIAADV ARYDLDSPGEPTQGAAAAAMLVSADPALLRLEEPTGIYTADIMDFWRPNYRSTALVDGKASVTAYMEAAS GAWKDYTERGGRAFGEFAAFCYHQPFTKMAYKAHKQLAAEAGEDASGAAVQAAVGNTVEYNRRIGNSYTA SLYLALAALLDQADDLSDQPIAMLSYGSGCVAELFAGTVTPGYQQHLRTDQHRAALETRIPLSYEHYRRL HNLTLPTNGNHHSLPVETSRPFRLTAISEHKRMYGAV*
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_3213 | pksG | - | 100% (388) | hydroxymethylglutaryl-coenzyme A synthase, PksG |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | - | - | - | - | - |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. avium 104 | MAV_5080 | - | 4e-06 | 24.15% (236) | hypothetical protein MAV_5080 |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | - | - | - | - | - |
M. vanbaalenii PYR-1 | - | - | - | - | - |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_3213|M.marinum_M MVSIGIHDLSIATAHYVLDHATLAEHHG------VDVNKYLIGLGQQQMS MAV_5080|M.avium_104 -MSSGLLSYASYLPRYRLSGQDIGVRHGNRVVASYDEDSTTMAVAAASSA :* *: . : .:* *. :. :** * :. :.:. . : MMAR_3213|M.marinum_M IVAPDEDIVTLAAAAADPIIKRHGSQKIRTIVIGTETGVDQSKSAGIWVS MAV_5080|M.avium_104 LMHSAVSPRALYFATSSPAYADKTNATAIHAALGLPADMPAADMCGTARS :: . . :* *::.* : . . .:* :.: :. .* * MMAR_3213|M.marinum_M SLLGLPSSARVLEVKQACYGATGALQLALALVHRDPTQQVLVIAADVARY MAV_5080|M.avium_104 AFAALTLAASSGGLVVAADVRVGRPGSADEKLGGDGAAALIFGEGDVIAE :: .*. :* : *. .* * : * : ::. .** MMAR_3213|M.marinum_M DLDSPGEPTQGAAAAAMLVSADPALLRLEEPTGIYTADIMDFWRPNYRST MAV_5080|M.avium_104 YLASRSLTAEFLDRWRDPTSRTGQQWEERFGAQHYTALIRDAAREALDAA * * . .:: .* . . : *** * * * :: MMAR_3213|M.marinum_M ALVDGKASVTAYMEAASGAWKDYTERGGR------AFGEFAAFCYHQPFT MAV_5080|M.avium_104 GIADPDHVVVACPNSGVVKRAATLVKGQKTVATSVGFGGSADALIALCGT .:.* . *.* ::. :* : .** * * MMAR_3213|M.marinum_M KMAYKAHKQLAAEAGEDASGAAVQAAVG--------NTVEYNRRIGNSYT MAV_5080|M.avium_104 LDVAEAGDTILVLSATDGCDAMVLRATSRLPRARQPRPLNDQRAEGTPVE . :* . : . :. *...* * *.. ..:: :* *.. MMAR_3213|M.marinum_M ASLYLALAALLDQADDLSDQP----------IAMLSYGSG-------CVA MAV_5080|M.avium_104 YVTYLAWRGLVTMEPPRRPEPERPAAPPASRARLWKFGMTGARCRACGFM *** .*: :* : .:* . MMAR_3213|M.marinum_M ELFAGTVTPGYQQHLRTDQHRAALETRIPLSYEHYRRLHNLTLPTN---- MAV_5080|M.avium_104 HLPPVRVCRSCNAIDEMDPQSAAGLRGTVVTYTVDRLAYSPSPPMVQAVV .* . * . : . * : ** ::* * :. : * MMAR_3213|M.marinum_M ----GNHHSLPVETSR------------PFR--LTAISEHKRMYGAV--- MAV_5080|M.avium_104 DVDGGGRCTLEVADARVEDLRVGTRVRFSFRRLFTASDVHNYFWKVVQDD *.: :* * :* .** :** . *: :: .* MMAR_3213|M.marinum_M -- MAV_5080|M.avium_104 AE