For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MLTPVPAVINFTLVSVPEQVEDLSGKRYGEVLLVEIGESGPQATVYNSFPLNDCPAELWSALDAQALAAE NGVAAALLNGPRYWLMNSIEKEPQGLPETKSFGGIEMLKQATVQMSSMSPAPYTVNRVNRHTVFVFNAGA EIYELIDPGGQRWVMQTWSQVVDPNLARADLPGLAARLDLPEGWSYEPRVLAETLRVDTTNRPAHVTQDD LSNSYSLEVD
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_3090 | - | - | 100% (220) | hypothetical protein MMAR_3090 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb2138 | - | 5e-89 | 76.96% (204) | hypothetical protein Mb2138 |
M. gilvum PYR-GCK | Mflv_3071 | - | 8e-70 | 62.12% (198) | hypothetical protein Mflv_3071 |
M. tuberculosis H37Rv | Rv2114 | - | 5e-89 | 76.96% (204) | hypothetical protein Rv2114 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. avium 104 | MAV_2401 | - | 6e-88 | 75.86% (203) | hypothetical protein MAV_2401 |
M. smegmatis MC2 155 | - | - | - | - | - |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_2336 | - | 1e-106 | 97.91% (191) | hypothetical protein MUL_2336 |
M. vanbaalenii PYR-1 | Mvan_3455 | - | 6e-75 | 66.16% (198) | hypothetical protein Mvan_3455 |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_3090|M.marinum_M MLTPVPAVINFTLVSVPEQVEDLSGKRYGEVLLVEIGESGPQATVYNSFP MUL_2336|M.ulcerans_Agy99 ------------------------------MLLVEIGESGPQATVYNSFP Mb2138|M.bovis_AF2122/97 MSAP-------------ERVTGLSGQRYGEVLLVTPGEAGPQATVYNSFP Rv2114|M.tuberculosis_H37Rv MSAP-------------ERVTGLSGQRYGEVLLVTPGEAGPQATVYNSFP MAV_2401|M.avium_104 MSARGSDGA------VGKHALDLAGKRYGEVLLVTPGEAGPQATVYNSFP Mflv_3071|M.gilvum_PYR-GCK -------------------MSSLFGRRYGEVLLVRMGDAGPEATVFNTYP Mvan_3455|M.vanbaalenii_PYR-1 -------------------MTNVFGKRYGEVLLVYVGENGPQATVYNTYP :*** *: **:***:*::* MMAR_3090|M.marinum_M LNDCPAELWSALDAQALAAENGVAAALLNGPRYWLMNSIEKEPQGLPETK MUL_2336|M.ulcerans_Agy99 LNDCPAELWSALDAQALAAENGVAAALLNGPRYWLMNSIEKEPQGLPESK Mb2138|M.bovis_AF2122/97 LNDCPAELWSALDPQALATEHKAATALLNGPRYWLMNAIEKAPQGPPVTK Rv2114|M.tuberculosis_H37Rv LNDCPAELWSALDPQALATEHKAATALLNGPRYWLMNAIEKAPQGPPVTK MAV_2401|M.avium_104 LNDCPAELWSALDPHAIAKEHGAAMALLNGPRYWLMNGIEKQPQGPRITK Mflv_3071|M.gilvum_PYR-GCK LNDCPAELWNRLDAQAIAAEHHCAAALLNGPRYWLMSRIEKVGGTETPRE Mvan_3455|M.vanbaalenii_PYR-1 LNDCPAELWTKLDTQTVAAEHGAAAALLNGPRYWLMSGIEKPGGTESERR *********. **.:::* *: * ***********. *** . MMAR_3090|M.marinum_M SFGGIEMLKQATVQMSSMSPAPYTVNRVN-RHTVFVFNAGAEIYELIDPG MUL_2336|M.ulcerans_Agy99 SFGGIEMLKQATVQMSSMSPAPYTVNRVNRRHTVFVFNAGAEIYELIDPG Mb2138|M.bovis_AF2122/97 TFGGIEMLQQATVLLSSMNPAPYTVSQVS-RNTVFVFNAGEEVYELQDPK Rv2114|M.tuberculosis_H37Rv TFGGIEMLQQATVLLSSMNPAPYTVSQVS-RNTVFVFNAGEEVYELQDPK MAV_2401|M.avium_104 TFGGIEMIQQATVLLSSMNPAPYIPNTVN-RHTVFVFDAGQEIYELIDPE Mflv_3071|M.gilvum_PYR-GCK TFGGIEMLQQATVSLSSMNPSPYSVNEVD-RKAVFVYDPGTPVFELIDPE Mvan_3455|M.vanbaalenii_PYR-1 TFGGIEMLRQATVALSSMNPAPYSVNEVD-RKAIFVYDAGTPVFELVDPD :******::**** :***.*:** . *. *:::**::.* ::** ** MMAR_3090|M.marinum_M GQRWVMQTWSQVVDPNLARADLPGLAARLDLPEGWSYEPRVLAETLRVDT MUL_2336|M.ulcerans_Agy99 GQHWVMQTWSQVVDPNLARADLPGLAARLDLPEGWSYEPRVLAETLRVDT Mb2138|M.bovis_AF2122/97 GQRWVMQTWSQVVDPNLSRADLPKLGERLNLPAGWSYHTRVLTSELRVDT Rv2114|M.tuberculosis_H37Rv GQRWVMQTWSQVVDPNLSRADLPKLGERLNLPAGWSYHTRVLTSELRVDT MAV_2401|M.avium_104 NQHWVMQTWSQVSDPTLSRADLPGLAGRLDLPAGWSYQPRVLTSELRVDT Mflv_3071|M.gilvum_PYR-GCK DRCWVMQTYSQTVDPELSVDDLPGLGDRLNLPDGWRYRARTLDQTVRVET Mvan_3455|M.vanbaalenii_PYR-1 GRRWVMQTYSQTVDPALTLEDLPGLAARLTLPAGWTYRSRTLDAPLTVDT .: *****:**. ** *: *** *. ** ** ** *..*.* : *:* MMAR_3090|M.marinum_M TNRPAHVTQDDLSNSYSLEVD MUL_2336|M.ulcerans_Agy99 TDRPAHVTQDDLSNSYSLEVD Mb2138|M.bovis_AF2122/97 TNREARVLQDDLTNSYSLVTA Rv2114|M.tuberculosis_H37Rv TNREARVLQDDLTNSYSLVTA MAV_2401|M.avium_104 TSRPARVLQDDLTNSYSLVTA Mflv_3071|M.gilvum_PYR-GCK ATRKARVLQDDLANSYSLLG- Mvan_3455|M.vanbaalenii_PYR-1 SNRKASVLQDDLANSYSLTS- : * * * ****:*****