For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
SARGSDGAVGKHALDLAGKRYGEVLLVTPGEAGPQATVYNSFPLNDCPAELWSALDPHAIAKEHGAAMAL LNGPRYWLMNGIEKQPQGPRITKTFGGIEMIQQATVLLSSMNPAPYIPNTVNRHTVFVFDAGQEIYELID PENQHWVMQTWSQVSDPTLSRADLPGLAGRLDLPAGWSYQPRVLTSELRVDTTSRPARVLQDDLTNSYSL VTA*
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. avium 104 | MAV_2401 | - | - | 100% (214) | hypothetical protein MAV_2401 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | Mb2138 | - | 2e-93 | 82.32% (198) | hypothetical protein Mb2138 |
| M. gilvum PYR-GCK | Mflv_3071 | - | 2e-69 | 64.29% (196) | hypothetical protein Mflv_3071 |
| M. tuberculosis H37Rv | Rv2114 | - | 2e-93 | 82.32% (198) | hypothetical protein Rv2114 |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | - | - | - | - | - |
| M. marinum M | MMAR_3090 | - | 8e-88 | 75.86% (203) | hypothetical protein MMAR_3090 |
| M. smegmatis MC2 155 | - | - | - | - | - |
| M. thermoresistible (build 8) | - | - | - | - | - |
| M. ulcerans Agy99 | MUL_2336 | - | 1e-81 | 77.13% (188) | hypothetical protein MUL_2336 |
| M. vanbaalenii PYR-1 | Mvan_3455 | - | 7e-73 | 65.64% (195) | hypothetical protein Mvan_3455 |
CLUSTAL 2.0.9 multiple sequence alignment
Mb2138|M.bovis_AF2122/97 MSAP-------------ERVTGLSGQRYGEVLLVTPGEAGPQATVYNSFP
Rv2114|M.tuberculosis_H37Rv MSAP-------------ERVTGLSGQRYGEVLLVTPGEAGPQATVYNSFP
MAV_2401|M.avium_104 MSARGSDGA------VGKHALDLAGKRYGEVLLVTPGEAGPQATVYNSFP
MMAR_3090|M.marinum_M MLTPVPAVINFTLVSVPEQVEDLSGKRYGEVLLVEIGESGPQATVYNSFP
MUL_2336|M.ulcerans_Agy99 ------------------------------MLLVEIGESGPQATVYNSFP
Mflv_3071|M.gilvum_PYR-GCK -------------------MSSLFGRRYGEVLLVRMGDAGPEATVFNTYP
Mvan_3455|M.vanbaalenii_PYR-1 -------------------MTNVFGKRYGEVLLVYVGENGPQATVYNTYP
:*** *: **:***:*::*
Mb2138|M.bovis_AF2122/97 LNDCPAELWSALDPQALATEHKAATALLNGPRYWLMNAIEKAPQGPPVTK
Rv2114|M.tuberculosis_H37Rv LNDCPAELWSALDPQALATEHKAATALLNGPRYWLMNAIEKAPQGPPVTK
MAV_2401|M.avium_104 LNDCPAELWSALDPHAIAKEHGAAMALLNGPRYWLMNGIEKQPQGPRITK
MMAR_3090|M.marinum_M LNDCPAELWSALDAQALAAENGVAAALLNGPRYWLMNSIEKEPQGLPETK
MUL_2336|M.ulcerans_Agy99 LNDCPAELWSALDAQALAAENGVAAALLNGPRYWLMNSIEKEPQGLPESK
Mflv_3071|M.gilvum_PYR-GCK LNDCPAELWNRLDAQAIAAEHHCAAALLNGPRYWLMSRIEKVGGTETPRE
Mvan_3455|M.vanbaalenii_PYR-1 LNDCPAELWTKLDTQTVAAEHGAAAALLNGPRYWLMSGIEKPGGTESERR
*********. **.:::* *: * ***********. *** .
Mb2138|M.bovis_AF2122/97 TFGGIEMLQQATVLLSSMNPAPYTVSQVS-RNTVFVFNAGEEVYELQDPK
Rv2114|M.tuberculosis_H37Rv TFGGIEMLQQATVLLSSMNPAPYTVSQVS-RNTVFVFNAGEEVYELQDPK
MAV_2401|M.avium_104 TFGGIEMIQQATVLLSSMNPAPYIPNTVN-RHTVFVFDAGQEIYELIDPE
MMAR_3090|M.marinum_M SFGGIEMLKQATVQMSSMSPAPYTVNRVN-RHTVFVFNAGAEIYELIDPG
MUL_2336|M.ulcerans_Agy99 SFGGIEMLKQATVQMSSMSPAPYTVNRVNRRHTVFVFNAGAEIYELIDPG
Mflv_3071|M.gilvum_PYR-GCK TFGGIEMLQQATVSLSSMNPSPYSVNEVD-RKAVFVYDPGTPVFELIDPE
Mvan_3455|M.vanbaalenii_PYR-1 TFGGIEMLRQATVALSSMNPAPYSVNEVD-RKAIFVYDAGTPVFELVDPD
:******::**** :***.*:** . *. *:::**::.* ::** **
Mb2138|M.bovis_AF2122/97 GQRWVMQTWSQVVDPNLSRADLPKLGERLNLPAGWSYHTRVLTSELRVDT
Rv2114|M.tuberculosis_H37Rv GQRWVMQTWSQVVDPNLSRADLPKLGERLNLPAGWSYHTRVLTSELRVDT
MAV_2401|M.avium_104 NQHWVMQTWSQVSDPTLSRADLPGLAGRLDLPAGWSYQPRVLTSELRVDT
MMAR_3090|M.marinum_M GQRWVMQTWSQVVDPNLARADLPGLAARLDLPEGWSYEPRVLAETLRVDT
MUL_2336|M.ulcerans_Agy99 GQHWVMQTWSQVVDPNLARADLPGLAARLDLPEGWSYEPRVLAETLRVDT
Mflv_3071|M.gilvum_PYR-GCK DRCWVMQTYSQTVDPELSVDDLPGLGDRLNLPDGWRYRARTLDQTVRVET
Mvan_3455|M.vanbaalenii_PYR-1 GRRWVMQTYSQTVDPALTLEDLPGLAARLTLPAGWTYRSRTLDAPLTVDT
.: *****:**. ** *: *** *. ** ** ** *..*.* : *:*
Mb2138|M.bovis_AF2122/97 TNREARVLQDDLTNSYSLVTA
Rv2114|M.tuberculosis_H37Rv TNREARVLQDDLTNSYSLVTA
MAV_2401|M.avium_104 TSRPARVLQDDLTNSYSLVTA
MMAR_3090|M.marinum_M TNRPAHVTQDDLSNSYSLEVD
MUL_2336|M.ulcerans_Agy99 TDRPAHVTQDDLSNSYSLEVD
Mflv_3071|M.gilvum_PYR-GCK ATRKARVLQDDLANSYSLLG-
Mvan_3455|M.vanbaalenii_PYR-1 SNRKASVLQDDLANSYSLTS-
: * * * ****:*****