For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTVELPPKPMLTEIPGRSAVGESDDRATTDPTDPKGRAVPWRPKLLPVEDRRSIMDTLMVTLSGGALWRF AALMFLSSMVASIGLLQNSAAVVIGAMMIAPLMAPIMGIAACLIMGWGHRLLRGLALVAVSAMVAVGVGW ITATLLPATGTGLPSEVVARSSPDIRDLLVAMGAGAVGALATVHKKISAALPGVAVAVAVVPPLGAAGVL LGRGQPQLARGAVILFSTNLVGIVVMAAVVFLLSGLVPLRKFRTHRRQIVASLGLAAVSAVAVAMILTPR FIALTGHARDLEIATQTLTDMLSPGSVLSHITATGSTVRADITSPTSPPPVQTVAASLSRALGHPVTVEL SWIPVRDPEHSRPDTPQPPLNELGPVIRSWLGAQSLTLQGLSYESGTLVVSTAGPFPPKRAEELTSLIDS RFNYRIPVSLAWTRTSGPAKSDGTQAALDTARTTATAWAAKRPDVAVLSTNGTASAITITLIGQTQPEVD SLEADLQTALPQSTITIQWISGGVLVVATPTPEPTPAPAPEPEPTPAKVSASTR
Operon Prediction Model: Genebank
Paralogs
| species | id | gene | e-value | identity (len) | annotation |
| M. marinum M | MMAR_3033 | - | - | 100% (544) | hypothetical protein MMAR_3033 |
| M. marinum M | MMAR_1764 | mmpL7 | 8e-06 | 25.97% (181) | transmembrane transport protein MmpL7 |
Closest Orthologs (e-value cutoff: 1e-4)
| species | id | gene | e-value | identity (len) | annotation |
| M. bovis AF2122 / 97 | - | - | - | - | - |
| M. gilvum PYR-GCK | Mflv_3772 | - | 7e-12 | 28.02% (232) | hypothetical protein Mflv_3772 |
| M. tuberculosis H37Rv | - | - | - | - | - |
| M. leprae Br4923 | - | - | - | - | - |
| M. abscessus ATCC 19977 | MAB_2864c | - | 2e-14 | 29.33% (225) | hypothetical protein MAB_2864c |
| M. avium 104 | - | - | - | - | - |
| M. smegmatis MC2 155 | - | - | - | - | - |
| M. thermoresistible (build 8) | TH_4626 | - | 1e-05 | 27.66% (188) | PUTATIVE ABC transporter ATP-binding protein |
| M. ulcerans Agy99 | MUL_2273 | - | 0.0 | 99.20% (503) | hypothetical protein MUL_2273 |
| M. vanbaalenii PYR-1 | Mvan_2627 | - | 1e-12 | 25.86% (232) | hypothetical protein Mvan_2627 |
CLUSTAL 2.0.9 multiple sequence alignment
MMAR_3033|M.marinum_M ---MTVELPPKPMLTEIPGRSAVGESDDRATTDPTDPKGRAVPWRPKLLP
MUL_2273|M.ulcerans_Agy99 ----------------------MGESDDRATTDPTDPKGRAVPWRPKLLP
Mflv_3772|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2627|M.vanbaalenii_PYR-1 --------------------------------------------------
MAB_2864c|M.abscessus_ATCC_199 --------------------------------------------------
TH_4626|M.thermoresistible__bu MIRTLLRLVPAEKRGAVAGYAVLTLLSVLLRAVGAVLLIPLLAALFSDTP
MMAR_3033|M.marinum_M VEDRRSIMDTLMVTLSGGALWRFAALMFLSSMVASIGLLQNSAAVVIGAM
MUL_2273|M.ulcerans_Agy99 VEDRRSIMDTLMVTLSGGALWRFAALMVLSSMVASIGLLQNSAAVVIGAM
Mflv_3772|M.gilvum_PYR-GCK ---------MLHLRVVVPEDMRDDVLDVLRSQVGVAHVLLHPGAAVD---
Mvan_2627|M.vanbaalenii_PYR-1 ---------MLHLRVIAPEDLRDDVLRVLQRHVGVAHLVIHPGAALD---
MAB_2864c|M.abscessus_ATCC_199 ---------MLHLRVIAPAEVSDQVVEFLSTTTGVTHIVRVPQAAIS---
TH_4626|M.thermoresistible__bu SDAWLWLGWLTAVTLAGWVTDTNTARLGFDLGFAVLSRTQHDMADRLPNV
: : . : . *
MMAR_3033|M.marinum_M MIAPLMAPIMGIAACLIMGWGHRLL----RGLALVAVSAMVAVGVGWITA
MUL_2273|M.ulcerans_Agy99 MIAPLMAPIMGIAACLIMGWGHRLL----RGLALVAVSAMVAVGVGWITA
Mflv_3772|M.gilvum_PYR-GCK --------------------------------------------------
Mvan_2627|M.vanbaalenii_PYR-1 --------------------------------------------------
MAB_2864c|M.abscessus_ATCC_199 --------------------------------------------------
TH_4626|M.thermoresistible__bu AMSWFTPDNTATARQAIAATGPELAGLVVNLLTPLIGAALLPAAIGVALL
MMAR_3033|M.marinum_M TLLPATGTGLPSEVVARSSPDIRDLLVAMGAGAVGALATVHKKISAALPG
MUL_2273|M.ulcerans_Agy99 TLLPATGTGLASEVVARSSPDIRDLLVAMGAGAVGALATVHKKISAALPG
Mflv_3772|M.gilvum_PYR-GCK ----PAGDVIAADLARECANDVIKNLKDLDAQHRGAIT----------LT
Mvan_2627|M.vanbaalenii_PYR-1 ----PEGDEIAADVARESANDVVKQLKDLDVQHRGAIT----------LT
MAB_2864c|M.abscessus_ATCC_199 ----PAGDLITADVARETANDVLDGLKSIDIDKRGSIT----------AE
TH_4626|M.thermoresistible__bu FVSVPLGLAALAGVAVLFGALALSGRLSRAADKVAGETN-----SAFTER
. * : :. . . .. :
MMAR_3033|M.marinum_M VAVAVAVVPPLGAAGVLL-GRGQPQLARGAVILFSTNLVGIVVMAAVVFL
MUL_2273|M.ulcerans_Agy99 VAVAVAVVPPLGAAGVLL-GRGQPQLARGAVILFSTNLVGIVVMAAVVFL
Mflv_3772|M.gilvum_PYR-GCK VLDTVLSTRAHRAEEEAV-GDPADAVVWDELIGRTREEATLSVTFVLFLT
Mvan_2627|M.vanbaalenii_PYR-1 ALDTVLSTRAHRAEDEAE-GDPADALVWDELITRTREESTLSVTFMTFLT
MAB_2864c|M.abscessus_ATCC_199 VLDTVISQTAYEAEDDAE-GDPADAVIWDELIGRTREESTLNLTFLAFLC
TH_4626|M.thermoresistible__bu IIEFARTQQALRAARRVEPARSQVGSALAAQHGAGLRLLTMQIPGQVLFS
. . * . . : : .:
MMAR_3033|M.marinum_M LSGLVPLRKFRTHRRQIVASLGLAAVSAVAVAMILT---PRFIALTGHAR
MUL_2273|M.ulcerans_Agy99 LSGLVPLRKFRTHRRQIVASLGLAAVSVVAVAMILT---PRFIALTGHAR
Mflv_3772|M.gilvum_PYR-GCK LACLLTAIGVVTDS-----------TVTVVGAMVLG---PEFGPLAALSV
Mvan_2627|M.vanbaalenii_PYR-1 LACLLAAIGAVTDS-----------MVTVVGAMVLG---PEFGPLAALSV
MAB_2864c|M.abscessus_ATCC_199 LACLIAAVGVVTDS-----------PVTIVGAMVVG---PEFGPLAALAV
TH_4626|M.thermoresistible__bu LAGQVALIGFAGMAVWLTVRGQLGVPEAIALIVVLVRYLEPFAAIADLAP
*: :. .:. ::: * .:: :
MMAR_3033|M.marinum_M DLEIATQTLTDMLSPGSVLSHITATGSTVRA-------------------
MUL_2273|M.ulcerans_Agy99 DLEIATQTLTDMLSPGSVLSHITATGSTVRA-------------------
Mflv_3772|M.gilvum_PYR-GCK ALVQRRMALARRAAVALVVGFPIAMA------------------------
Mvan_2627|M.vanbaalenii_PYR-1 ALVQRRGDLARRATIALLIGFPVAMG------------------------
MAB_2864c|M.abscessus_ATCC_199 SIVRRKWSLARRSLLALLVGFPVAMG------------------------
TH_4626|M.thermoresistible__bu ALETTRATLNRIQAVLDAPTLPAGRRRLDRTGAAPSIEFDDVRFSYGDEV
: * .
MMAR_3033|M.marinum_M DITSPTSPPPVQTVAASLSRALGHPVTVELSWIPVRDPEHSRPDTPQPPL
MUL_2273|M.ulcerans_Agy99 DITSPTSPPPVQTVAASLSRALGHPVTVELSWIPVRDPEHSRPDTPQPPL
Mflv_3772|M.gilvum_PYR-GCK ----------ITAIATWAAESLG--------WITLDSVAH---------V
Mvan_2627|M.vanbaalenii_PYR-1 ----------ITALLTLAGRAVG--------WLSFDTIGD---------I
MAB_2864c|M.abscessus_ATCC_199 ----------VTAVGALAAEAAG--------WVTLKSVRE---------L
TH_4626|M.thermoresistible__bu VLDGVSFTLRPGNTTAIVGPSGSGKTTILSLIAGLQQPASGRVLLDGVDV
: . : . . :
MMAR_3033|M.marinum_M NELGPVIRSWLGAQSLTLQGLSY---ESGTLVVSTAGPFPPKRAEELTSL
MUL_2273|M.ulcerans_Agy99 NELGPVIRSWLGAQSLTLQGLSY---ESGTLVVSTAGPFPPKRAEELTSL
Mflv_3772|M.gilvum_PYR-GCK EEVDFIFR--VGPVSFMVALLAG---AAGMLSLVSA------RSAGLVGV
Mvan_2627|M.vanbaalenii_PYR-1 HDVDFIFQ--VGPVSFVVALLAG---AAGMLSLMSS------KSAALVGV
MAB_2864c|M.abscessus_ATCC_199 QQVDFVFQ--VGPFSLVVALLAG---AAGMLSLMSA------KSAALVGV
TH_4626|M.thermoresistible__bu TTLDPEARRAAVSVVFQHPYLFDGTLRDNVLVGDPEADPDDVTAAMRLAR
:. : . : * . * . : .
MMAR_3033|M.marinum_M IDSRFNYRIPVSLAWTRTSGPAKSDGTQAALDTARTTATAWAAKRPDVAV
MUL_2273|M.ulcerans_Agy99 IDSRFNYRIPVSLAWTRTSGPAKSDGTQAALDTARTTATTWAAKRPDVAV
Mflv_3772|M.gilvum_PYR-GCK FIS-------------------VYTVTAAGFAVVAATVGAWDVAAKSALQ
Mvan_2627|M.vanbaalenii_PYR-1 FIS-------------------VTTVPAAGFTAVAGILGHWDVAAQSAAQ
MAB_2864c|M.abscessus_ATCC_199 FIS-------------------VTTVPAAGFAVVAATVGEWDIAGLSALQ
TH_4626|M.thermoresistible__bu VDELLDRLPDGDATVVGEGGTALSGGERQRVSIARALLKPAPVLLVDEAT
. . . . .
MMAR_3033|M.marinum_M LSTN-GTASAITITLIGQTQPEVDSLEADLQTALPQSTITIQWISGGVLV
MUL_2273|M.ulcerans_Agy99 LSTN-GTASAITITLIGQTQPEVDSLEADLQTALPQSTITIQWISGGVLV
Mflv_3772|M.gilvum_PYR-GCK LVVN-LVGIVLAGVLVLVLRPRGRLVARTARK------------------
Mvan_2627|M.vanbaalenii_PYR-1 LAVN-LVGVVLAGVLVLVLRPRGNVIPRSAQT------------------
MAB_2864c|M.abscessus_ATCC_199 LAVN-LFGIVLAGVLVLWVRPRGYR-------------------------
TH_4626|M.thermoresistible__bu SALDNANEAAVVDALTADPRPRTRVIVAHRLASIRHADRVLFVEAGRVVE
: .:. .* :*.
MMAR_3033|M.marinum_M VATPTPEPTPAPAPEPEPTPAK---VSASTR------
MUL_2273|M.ulcerans_Agy99 VATPTPRTHAGSGTRARTDARKGVHLDALTETAGEDG
Mflv_3772|M.gilvum_PYR-GCK -------------------------------------
Mvan_2627|M.vanbaalenii_PYR-1 -------------------------------------
MAB_2864c|M.abscessus_ATCC_199 -------------------------------------
TH_4626|M.thermoresistible__bu DGAIDELLAAGGRFAQFWAQQQAASEWAIGSTAR---