For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
VTESATSELARHIRDVALIDQHVHGCWLTAGERSRFENALNEANTQPLADFDSAFDSQLGFALRKHCGPI LGLPEHVDPQTYWEHRSQFSEAELAERFLAAAGVTDWLVDTGINGDVAGPAELSALSRGRAHEVVRLEQV AEQAAQAPGDYALAFQELLHQRMATAVGTKSILAYRGGFDGDLTEPSPAQVAQAARRWRDCGETRLSDRV LLRFGLHQALRLGKPLQLHVGFGDRDCDLHKTNPLYLLDFLRQSGETPIVLLHCYPYEREAGYLAQAFNN VFVDGGLTVNYLGARAPEFIGRLMELAPLRKIVYSSDGFGPAELHYLGAALWRRGIHRVLHGFVQSGDWA EADAIRVVDLIGRGNAARIYRLDQKANQTMSENS
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_2764 | - | - | 100% (384) | hypothetical protein MMAR_2764 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | Mb1911 | - | 1e-173 | 78.04% (378) | hypothetical protein Mb1911 |
M. gilvum PYR-GCK | Mflv_3318 | - | 1e-148 | 66.76% (367) | amidohydrolase 2 |
M. tuberculosis H37Rv | Rv1879 | - | 1e-173 | 78.04% (378) | hypothetical protein Rv1879 |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | - | - | - | - | - |
M. avium 104 | MAV_2828 | - | 1e-159 | 74.32% (370) | amidohydrolase 2 |
M. smegmatis MC2 155 | MSMEG_0362 | - | 9e-94 | 47.49% (379) | amidohydrolase 2 |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_2988 | - | 0.0 | 94.27% (384) | hypothetical protein MUL_2988 |
M. vanbaalenii PYR-1 | Mvan_2917 | - | 2e-94 | 47.31% (372) | amidohydrolase 2 |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_2764|M.marinum_M ------------MTESATSELARHIRDVALIDQHVHGCWLTAGERSRFEN MUL_2988|M.ulcerans_Agy99 ------------MTESATSELARHIRDVALIDQHVHGCWLTAGERSRFEN Mb1911|M.bovis_AF2122/97 ------------MADSAGSDLTRHTAEVPLIDQHVHGCWLTEGNRRRFEN Rv1879|M.tuberculosis_H37Rv ------------MADSAGSDLTRHTAEVPLIDQHVHGCWLTEGNRRRFEN MAV_2828|M.avium_104 -------------MVSDTDALAEHIGAVSLIDQHVHGCWLTTGGRRRFEN Mflv_3318|M.gilvum_PYR-GCK -----------------MSSLREHIEAVPLVDHHVHGCWLGRHDRAQFEN MSMEG_0362|M.smegmatis_MC2_155 ------MDVFDGVENEVPGELAERLRTVGLIDHHVHGASAVRVGRAEFEA Mvan_2917|M.vanbaalenii_PYR-1 MPVGELQDVFDGVQAQVPEGLADHLRTVALVDHHVHGTFTEAVDRATFEF * : * *:*:**** * ** MMAR_2764|M.marinum_M ALNEANTQPLADFDSAFDSQLGFALRKHCGPILGLPEHVDPQTYWEHRSQ MUL_2988|M.ulcerans_Agy99 ALNEANTQPLADFDSAFDSQLGFALRKHCGPILGLPEHVDPKTYWEHRSQ Mb1911|M.bovis_AF2122/97 ALNEANTEPLADFDSGFDSQLGFAVRNHCAPILGLPRHVDPQTYWDRRSQ Rv1879|M.tuberculosis_H37Rv ALNEANTEPLADFDSGFDSQLGFAVRNHCAPILGLPRHVDPQTYWDRRSQ MAV_2828|M.avium_104 ALNEANTEPITG--SGFDSQLGFAVRAHCAPILGLPRHADPQSYWERRCQ Mflv_3318|M.gilvum_PYR-GCK ALNEADTAPLAEFDSAFDTQLGFAVRAHCAQTVGLERHCGADEYWNARAR MSMEG_0362|M.smegmatis_MC2_155 SINEASTAPVPEFMTQFDSPLGLSIRRWCAPVLGLPAHASADEYFARRSE Mvan_2917|M.vanbaalenii_PYR-1 SINEGSNDPVPTWMTQFDSPLGLSIRRWCAPLLGLPPRADGEVYWKRRCE ::**... *:. : **: **:::* *. :** : . . *: *.. MMAR_2764|M.marinum_M FSEAELAERFLAAAGVTDWLVDTGING-DVAGPAELS---ALSRGRAHEV MUL_2988|M.ulcerans_Agy99 LGETELAERFLAAAGVTDWLVDTGIDS-DVAGPAELS---ALSGGRAHEV Mb1911|M.bovis_AF2122/97 FSEAELARRFLQAAGVTDWLVETGIGY-DVSGMASVAGLGELSGSHAHEV Rv1879|M.tuberculosis_H37Rv FSEAELARRFLQAAGVTDWLVETGIGY-DVSGMASVAGLGELSGSHAHEV MAV_2828|M.avium_104 LSEHELARLFLPAAGVCNWLVDTGIGHGVVAGVAEMA---ELAAAPTAEL Mflv_3318|M.gilvum_PYR-GCK IDEDVLAQRFLGGAGVSDWIVDTGFAH-GVADPEQLAG---LGAGRVHEV MSMEG_0362|M.smegmatis_MC2_155 FAPAELSSTLLAHAGVERWIVDTGFGTELITTPEQLA---ALSGRPASTI Mvan_2917|M.vanbaalenii_PYR-1 FGPDELATTMLPAAGVSRWIVDTGFKGDRITPHRRLA---ELAGGQSSEI : *: :* *** *:*:**: :: :: *. : MMAR_2764|M.marinum_M VRLEQVAEQAAQA----PGDYALAFQELLHQRMAT--AVGTKSILAYRGG MUL_2988|M.ulcerans_Agy99 VRLEQVAEQAAQA----PGDYALAFQELLHQRMAT--AIGTKSILAYRGG Mb1911|M.bovis_AF2122/97 VRLEQVAEQAVQA----SGDYASAFNEILRRRAAT--AVATKSILAYRGG Rv1879|M.tuberculosis_H37Rv VRLEQVAEQAVQA----SGDYASAFNEILRRRAAT--AVATKSILAYRGG MAV_2828|M.avium_104 VRLEEVAEQAAHA----PGDYAAAFDEILAARAAG--AVGTKSILAYRGG Mflv_3318|M.gilvum_PYR-GCK VRLESTAELAAAA----TGDYAAAFDELLDRQTRT--AVGTKSILAYRGG MSMEG_0362|M.smegmatis_MC2_155 LRLERLAEELLES-HSGADDFVDRFRSALDAAAQSTDIVGTKTIAAYRTG Mvan_2917|M.vanbaalenii_PYR-1 VRLERLAEDLLVDGGTAAEDFPDAMRSALARAAVDPVVVGTKTIVAYRTG :*** ** . *: : . * :.**:* *** * MMAR_2764|M.marinum_M FDGDLTEPSPAQVAQAARRWRDC-GETRLSDRVLLRFGLHQALRLGKPLQ MUL_2988|M.ulcerans_Agy99 FDGDLTEPSPAQVAQAAKRWRDC-GGTRLSDRVLLRFGLHQALRLGKPLQ Mb1911|M.bovis_AF2122/97 FDGDLTEPPAAQVAEAAKRWRDR-GGVRLQDRVLLRFGLHQALRLGKPLQ Rv1879|M.tuberculosis_H37Rv FDGDLTEPPAAQVAEAAKRWRDR-GGVRLQDRVLLRFGLHQALRLGKPLQ MAV_2828|M.avium_104 FDGDLSEPSATEVARAAARWREL-GGTRLRDRVLLRFGLHRALRLGKPLQ Mflv_3318|M.gilvum_PYR-GCK FVGDLSDPSPREVADAAARWRDA-GGTRLTDRVLLRFGLHRALRIGKPLQ MSMEG_0362|M.smegmatis_MC2_155 FDIDWARPGDDDVAARARAAADGPGPLRLQDPVLVAFGVHEAAERGLPVQ Mvan_2917|M.vanbaalenii_PYR-1 FDIDWSRPTDADVVTRARELTARPGPPRIDDPILIAFGVHEAAAHQLPIQ * * : * :*. * * *: * :*: **:*.* *:* MMAR_2764|M.marinum_M LHVGFGDRDCDLHKTNPLYLLDFLRQSGETPIVLLHCYPYEREAGYLAQA MUL_2988|M.ulcerans_Agy99 LHIGFGDRDCDLHKTNPLYLLDFLRQSGETPIVLLHCYPYEREAGYLAQA Mb1911|M.bovis_AF2122/97 FHVGFGDRDADLHKANPLYLLDFLRQSGNTPIVLLHCYPYEREAGYLAQA Rv1879|M.tuberculosis_H37Rv FHVGFGDRDADLHKANPLYLLDFLRQSGNTPIVLLHCYPYEREAGYLAQA MAV_2828|M.avium_104 LHVGFGDRDCDLHKANPLLLLDFLHHSGDVPIVLLHCYPYEREAGYLAQA Mflv_3318|M.gilvum_PYR-GCK VHVGFGDRDCDLHTANPIHLLDFLRMSGDTPVMLLHCYPYEREAGYLAQA MSMEG_0362|M.smegmatis_MC2_155 VHVGFGDRDLDLHRTDPLLLLPLLRCMAPVPVLLLHCYPFHRQAGYLAQA Mvan_2917|M.vanbaalenii_PYR-1 VHVGFGDRDLDLHRSDPLLLLPLLRTMPPVPVLLLHCYPFHRQAGYLAQA .*:****** *** ::*: ** :*: .*::******:.*:******* MMAR_2764|M.marinum_M FNNVFVDGGLTVNYLGARAPEFIGRLMELAPLRKIVYSSDGFGPAELHYL MUL_2988|M.ulcerans_Agy99 FNNVFVDGGLTVNYLGARAPEFIGRLLELASLRKIVHSSDGFGPAELHYL Mb1911|M.bovis_AF2122/97 FNNVYLDGGLSVHYLGARSPAFIGRLLELAPFRKIVYSSDGFGPAELHFL Rv1879|M.tuberculosis_H37Rv FNNVYLDGGLSVHYLGARSPAFIGRLLELAPFRKIVYSSDGFGPAELHFL MAV_2828|M.avium_104 FNNVYVDGGLSVNHLGARSPAFLARLLELAPFSKILYSSDGFGPAELHFL Mflv_3318|M.gilvum_PYR-GCK FHNVYLDGGLSINHLGARSAAFIARLLEMAPFRKILYSSDGFGPAELHYL MSMEG_0362|M.smegmatis_MC2_155 FDHVHFDVGLAVNHLGTRSVGLVAEALETAPFAKQLYSSDAYGPPELHLL Mvan_2917|M.vanbaalenii_PYR-1 FDHVNFDVGLAINYLGARSTGLVAEALDTAPFAKQLYSSDAFGPPELHVL *.:* .* **::::**:*: ::.. :: *.: * ::***.:**.*** * MMAR_2764|M.marinum_M GAALWRRGIHRVLHGFVQSGDWAEADAIRVVDLIGRGNAARIYRLDQKAN MUL_2988|M.ulcerans_Agy99 GAALWRRGIHRVLHGFVQSGDWAEADAIRVVDLIGHDNAARIYQLEQKGD Mb1911|M.bovis_AF2122/97 GATLWRSGIQRVLRGFVERDDWCETDALRVVDLIAHGTAARIYRLGDR-- Rv1879|M.tuberculosis_H37Rv GATLWRSGIQRVLRGFVERDDWCETDALRVVDLIAHGTAARIYRLGDR-- MAV_2828|M.avium_104 GAVLWRRGIHRVLREFVEAGDWSRADAIRVVDLIARENAARLYGLAP--- Mflv_3318|M.gilvum_PYR-GCK GARLWRNGIGAAMQSFIDTGEWSEADATRVVDLIAHRNARRVYRLD---- MSMEG_0362|M.smegmatis_MC2_155 GSVLWRRAMGLVLGGWVRAGDCTEIDAIRIVELIGAQNAARVYGLGR--- Mvan_2917|M.vanbaalenii_PYR-1 GSVLWRRAMGLVLGEWVRTGDCTEADAIRIVDMIGMTNAQRVYGL----- *: *** .: .: :: .: . ** *:*::*. .* *:* * MMAR_2764|M.marinum_M QTMSENS MUL_2988|M.ulcerans_Agy99 QSMSKNS Mb1911|M.bovis_AF2122/97 ------- Rv1879|M.tuberculosis_H37Rv ------- MAV_2828|M.avium_104 ------- Mflv_3318|M.gilvum_PYR-GCK ------- MSMEG_0362|M.smegmatis_MC2_155 ------- Mvan_2917|M.vanbaalenii_PYR-1 -------