For questions or suggestions e-mail us at: ioerger@cs.tamu.edu
MTHTEDCPARLGMPRSRGAVTGILLVVLGAWGALIPFVGPSFDFGYTPGHAWTAARGWLEVLPGIVTVVA GLLLIISTNRASAVFGGWLAGLAGAWFVVGVSLAPLLRIGSVGDPVAATNFKRALIEVSYFSGLGVVIVF LAGAVLARLVARLARDVQPVPAPAYAAYAPEADQTAEEEPQDEPESKDPKSKDEATEEEAPKEPEASEAE AETEHHGLAFHPFRRHRAGV
Operon Prediction Model: Genebank
Paralogs
species | id | gene | e-value | identity (len) | annotation |
M. marinum M | MMAR_2115 | - | - | 100% (230) | hypothetical protein MMAR_2115 |
Closest Orthologs (e-value cutoff: 1e-4)
species | id | gene | e-value | identity (len) | annotation |
M. bovis AF2122 / 97 | - | - | - | - | - |
M. gilvum PYR-GCK | Mflv_3821 | - | 1e-46 | 48.45% (194) | hypothetical protein Mflv_3821 |
M. tuberculosis H37Rv | - | - | - | - | - |
M. leprae Br4923 | - | - | - | - | - |
M. abscessus ATCC 19977 | MAB_1062 | - | 8e-06 | 34.88% (86) | hypothetical protein MAB_1062 |
M. avium 104 | MAV_3472 | - | 2e-61 | 60.20% (201) | hypothetical protein MAV_3472 |
M. smegmatis MC2 155 | MSMEG_2958 | - | 9e-50 | 49.08% (218) | hypothetical protein MSMEG_2958 |
M. thermoresistible (build 8) | - | - | - | - | - |
M. ulcerans Agy99 | MUL_1720 | - | 1e-128 | 97.83% (230) | hypothetical protein MUL_1720 |
M. vanbaalenii PYR-1 | Mvan_2577 | - | 3e-47 | 55.29% (170) | hypothetical protein Mvan_2577 |
CLUSTAL 2.0.9 multiple sequence alignment MMAR_2115|M.marinum_M -------------------------------------------------- MUL_1720|M.ulcerans_Agy99 -------------------------------------------------- Mflv_3821|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_2577|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_2958|M.smegmatis_MC2_155 -------------------------------------------------- MAV_3472|M.avium_104 -------------------------------------------------- MAB_1062|M.abscessus_ATCC_1997 MNQPSRANPAQARALLTVAFGPSAVALVIIAAIVLVQLVIANSDMTGTFG MMAR_2115|M.marinum_M -------------------------------------------------- MUL_1720|M.ulcerans_Agy99 -------------------------------------------------- Mflv_3821|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_2577|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_2958|M.smegmatis_MC2_155 -------------------------------------------------- MAV_3472|M.avium_104 -------------------------------------------------- MAB_1062|M.abscessus_ATCC_1997 AVASMWLGTHLVPISIGGRVIEVLPLLPTAAMVWGVARTVASALAPTTSW MMAR_2115|M.marinum_M -------------------------------------------------- MUL_1720|M.ulcerans_Agy99 -------------------------------------------------- Mflv_3821|M.gilvum_PYR-GCK -------------------------------------------------- Mvan_2577|M.vanbaalenii_PYR-1 -------------------------------------------------- MSMEG_2958|M.smegmatis_MC2_155 -------------------------------------------------- MAV_3472|M.avium_104 -------------------------------------------------- MAB_1062|M.abscessus_ATCC_1997 YVIRWVIASALAGPLLMTAISLAIIHDASTVLTQLQSPNALRAFGCVLGV MMAR_2115|M.marinum_M --------MTHTEDCPAR--LGMPRS-----RGAVTGILLVVLGAWGALI MUL_1720|M.ulcerans_Agy99 --------MTHTEDRPAR--LGMPRS-----RGAVTGILLVVLGAWGALT Mflv_3821|M.gilvum_PYR-GCK --------MADTTTRAGRGTMQIPRS-----RGAVSGLLIVALGVWGALI Mvan_2577|M.vanbaalenii_PYR-1 --------MVDTSGRSRRGAMQIPRS-----RGAVSGLLIVALGVWGALA MSMEG_2958|M.smegmatis_MC2_155 --------MTDYETRGGR--LTMPRS-----RGAASGLLLVVLGIYGALI MAV_3472|M.avium_104 --------MKYAEDGHTRG-LSMPRS-----RGAVSGLLLVILGAWGALI MAB_1062|M.abscessus_ATCC_1997 HAVGAVIGVVTRVGRRIALVLQLPSWPMDAARGAVAG-VLALFGLSGAVT : : :* ***.:* ::. :* **: MMAR_2115|M.marinum_M P----FVGPSFDFGYTPG--HAWTAARGWLEVLPGIVTVVAGLLLIISTN MUL_1720|M.ulcerans_Agy99 P----FVGPSFDFGYTPG--HAWTAARGWLEVLPGIVTVVAGLLLIISTN Mflv_3821|M.gilvum_PYR-GCK P----FVGPLFDFAFSPDRPWAWTAGRGWLQVLPGLVAVLGGLLLFASRN Mvan_2577|M.vanbaalenii_PYR-1 P----FVGPLFDFAFTPDRPWAWTQGRGWLEVLPGLVAVFGGLLLFVSRN MSMEG_2958|M.smegmatis_MC2_155 P----FVGPYLDFAFTPDQPWAWTTARGWLEVLPGAATALGGFLLLTSGN MAV_3472|M.avium_104 P----FVGPHFNFAYTPDRDWAWSSARGWLEVAPGAATALGGLLLIVAGN MAB_1062|M.abscessus_ATCC_1997 AGSLVVHWATMDQLYSVTNDFVGQLSLTLLAILYAPNVILGSCALAVGSS . . . :: :: . . * : . . ... * . . MMAR_2115|M.marinum_M RAS--------AVFGGWLAGLAG--------------AWFVVGVSLAPLL MUL_1720|M.ulcerans_Agy99 RAS--------AVFGGWLAGLAG--------------AWFVVGVSLAPLL Mflv_3821|M.gilvum_PYR-GCK RAT--------AMLGSWMAVAAG--------------AWFVVGRAVAGPL Mvan_2577|M.vanbaalenii_PYR-1 RAT--------AMLGGWLAVAAG--------------AWFVVGRAVAGPL MSMEG_2958|M.smegmatis_MC2_155 RLS--------AMLGGWLAVLGG--------------AWFVVGRALAGPL MAV_3472|M.avium_104 RVA--------AMLGGWLAVLAG--------------AWFVVGGQLAPLL MAB_1062|M.abscessus_ATCC_1997 AHVGTATFSAFAVFGGQLPAVPILAAVPTPPLGPAWVALMIIGAVSGVAV *::*. :. * :::* . : MMAR_2115|M.marinum_M RIGSVGDPVAATNFKR-----ALIEVSYFSGLGVVI-------------- MUL_1720|M.ulcerans_Agy99 RIGSVGDPVAATNFKR-----ALIEVSYFSGLGVVI-------------- Mflv_3821|M.gilvum_PYR-GCK GLGNAGEPVAATEAHR-----VWLELTYFSGLGALI-------------- Mvan_2577|M.vanbaalenii_PYR-1 GLGGAGQPVADSETKQ-----VWLELTYFSGLGALI-------------- MSMEG_2958|M.smegmatis_MC2_155 GLGNPGSPVAVTDAKR-----VTLELAYFGGLGALI-------------- MAV_3472|M.avium_104 GIGSAGDPIAATERKR-----ALLEVTYFSGLGALI-------------- MAB_1062|M.abscessus_ATCC_1997 GQQCARHPVPWPTAIHKVVTAALLAATFLAIVGKLAGGQLGNFGRLGIDQ *:. . : . : :::. :* : MMAR_2115|M.marinum_M ------VFLAGAVLARLVARLARDVQPVPAP-----AYAAYAPEADQTAE MUL_1720|M.ulcerans_Agy99 ------VFLAGAVLARLVARLARDVQPVPAP-----AYAAYAPEADQTAE Mflv_3821|M.gilvum_PYR-GCK ------IFLAALAAGRLSVRSVRDIAYR-------------DSRAQTEDD Mvan_2577|M.vanbaalenii_PYR-1 ------VFLAALAVGRLSVRTARDIAYR-------------EARVDTAEP MSMEG_2958|M.smegmatis_MC2_155 ------ILLAAMALGRLSVRSVRDVAYARRPLAGDRAETRYDDRVDAPAD MAV_3472|M.avium_104 ------IFVGGVVLARTSARLARDVQPLA------------SDAPAAPAV MAB_1062|M.abscessus_ATCC_1997 GTFGPGVFFWFLVIGLLTVFMLGGATRLPAR---------TRRDPEPAPE ::. . . . . MMAR_2115|M.marinum_M EEPQDEPESKDPKSKDEATEEEAPKEPEASEAEAETEHHGLAFH--PFRR MUL_1720|M.ulcerans_Agy99 EEPQDDPESKDPKSKDEATEEEAPKEPEESEAEAEAEHHGLAFH--PFRR Mflv_3821|M.gilvum_PYR-GCK PTVTD-TSGWSQHGPAAGTGPDAVTEPVGRRRRSLFGRRRR------DSR Mvan_2577|M.vanbaalenii_PYR-1 HPVTDGTAGWNQ--------PDAAGEPT-RRRHGLFGRRRG------SDR MSMEG_2958|M.smegmatis_MC2_155 THVVDAPTSQIPAQPVAATATPTTSMPASQHPESMRAPRRRRFGGLFGRR MAV_3472|M.avium_104 EPYRDPAYDPADVSSGALTKPRTSADPEPKRGWRKNRAGGN----AAYLR MAB_1062|M.abscessus_ATCC_1997 PEMDPEPAPAPEPDPEPAPEPEPQREPEPESEPEADTDEGPEID--PSDP . . * MMAR_2115|M.marinum_M HRAGV- MUL_1720|M.ulcerans_Agy99 HRAGV- Mflv_3821|M.gilvum_PYR-GCK DTLTV- Mvan_2577|M.vanbaalenii_PYR-1 TTLPV- MSMEG_2958|M.smegmatis_MC2_155 HTTAH- MAV_3472|M.avium_104 WPHPQQ MAB_1062|M.abscessus_ATCC_1997 PESAK-